Oryzias latipes (Japanese medaka): 101164431
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Entry
101164431 CDS
T02443
Symbol
prdm1
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101164431 (prdm1)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
101164431 (prdm1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
101164431
NCBI-ProteinID:
NP_001265815
UniProt:
H2MLR0
LinkDB
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Position
16:complement(26685891..26698346)
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AA seq
845 aa
AA seq
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MCGWDQSYMATSHSSATLTSEGAHTMEQEDTHPKMASTATSMLSDGAETLTDTDVDVEME
ETDMSTWTDTEFEKKCTYIVQDTPWEAAPDGDGMMTTTRAEVSLPRNLAFKHKAGSKEVV
GVCSREYIPQGTRFGPLVGEIYTADSVPKDANRKYFWRIYADGDFHHFVDGLDETRSNWM
RYVNPARSAAEQNLAACQNGMEIYFYTVKPVPAGAELLVWYCHEFARRLRYPSSGELMMQ
KLKESLLEGKHHKLSSEEHLDEASSPSPVRVTPKPPKREHSVLSILRGTNSTSSGSSKRE
PSRPLVTRPLCADSPERPLYPRALYPAIRPHPHMSDDFLSHKPSNLGYPSTHSPGNQSSA
TPSPSARSSPDSTPQGSPCGPAPSPASFYPTGLGSYPGYSPPSAPLSTQFYSPASPYPRY
LLPHHYPLSGGGVPTVGGMIPRMYPLLHPHVPLLPSDPGRHFLMPEPMHPSSFSSHRDLF
LPGSTSAFTIKTPLIDRAGPHNPYSGLLNPHGPARTPSSGSPTAGTAPPSEQVPTKPTSA
LLGNTSEHRTDEEAINLTKVKRGAGSAGYKALPYPLKKQNGKIKYECNVCSKTFGQLSNL
KVHLRVHSGERPFKCQTCSKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHL
RLHSGEKPYHCKLCPAKFTQFVHLKLHKRLHSRERPHKCPHCHRHYIHLCSLRLHLKGYC
LAVNSGSRSPTVSSQAALEEMHRANEEIERFDISEHAERLDQLPGGAEIDTMLEKQVLGM
LWRDTEMKSLHFHPHHKGGSTELLSSGYGSYESAKETSVIKMRRSSPDSSLPVGVTVKQE
SDDHA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggatgggatcaaagttacatggcgacctctcatagctcggccacattgaccagt
gagggggcacacaccatggagcaagaggacacacaccccaagatggcctccacagccacc
agcatgctgtcagacggagctgagacgttgaccgacacggacgtcgacgtggagatggag
gagacagacatgagcacatggaccgacacagagtttgagaagaagtgcacgtacatcgtc
caagacacgccgtgggaggcggccccagatggcgatggcatgatgacgacaacaagagcg
gaggtgtcgctgccgcgaaatcttgccttcaaacacaaggctggcagcaaagaggtggtc
ggcgtgtgcagcagagaatacatcccccaaggaacgcgcttcggccctctggtgggcgag
atctacacggccgacagcgtacccaaagacgccaaccgcaaatacttctggaggatctat
gcagacggtgattttcaccattttgtggacggcctggatgagactcggtccaactggatg
cgctacgtgaacccggctcgctccgccgcagagcagaacctggcagcgtgccagaacggc
atggagatatacttctacacggtgaagcctgtccctgccggtgccgagctgctggtgtgg
tactgccacgagtttgcccgccgcctgcggtacccgtcctcaggggagctgatgatgcag
aagctcaaggagtcacttttagagggcaagcaccataagttgagcagcgaggagcattta
gatgaagcatccagcccatctcctgtcagggttaccccaaagccaccaaagagggagcac
agcgtcctttccattctgcgtggcaccaacagcacctcgtctgggtccagcaagagggag
cccagccggccgcttgtcacccgccctctttgtgctgacagcccagagcggcccctgtac
ccccgtgctctttacccggctatcaggccccacccacacatgtcagatgacttcctcagt
cacaaacccagcaacctcggctacccttcaactcactcccctggaaaccagtcttcagct
acacctagtccatctgcaaggagcagtccagacagcaccccacaggggagcccctgtggt
cctgccccatcccctgcgtcattttaccctaccggactcggttcctaccctggatactca
ccaccatctgcccccctctccacacaattttattctccagcaagcccctacccacggtac
ctcctaccacatcactaccctctttctggtggtggtgttcctacagttggagggatgatt
cctagaatgtaccctctcttgcaccctcatgtgcccctcttgccctctgacccaggaagg
cacttcttaatgccggaacctatgcacccctcttccttttcttcccacagagacctcttt
ctacctgggtccaccagtgccttcactatcaaaactcccctgatagacagagcagggcct
cacaacccttattctggactccttaacccacacggaccggcccgaaccccctcaagtggc
tccccaactgcgggcactgcacctcccagcgagcaggtgcccacaaagcctacctcagcc
ctactgggcaacaccagcgaacatcgtactgatgaagaggccattaacctgacaaaggtg
aagcggggagccggctctgcaggctacaaggcgctgccttaccctctaaagaagcagaac
ggcaaaatcaaatacgagtgcaacgtgtgcagtaagaccttcgggcaactgtcaaacctg
aaggttcatctacgtgtgcacagtggagaaagaccatttaaatgtcagacctgcagcaaa
gggttcactcagcttgctcacctgcaaaaacactacttggtccacactggggagaagcca
catgaatgtcaggtttgtcacaagcgcttcagcagcaccagcaacctgaaaactcacctg
cgtctccactcaggggaaaagccttaccactgcaaactatgcccggcaaagttcacccag
ttcgtccacctcaagctccacaagcgcttgcactcccgtgagcgtccccacaaatgcccg
cactgccatcgccactacatccacctgtgcagcctgcgacttcacctgaagggttactgc
ctggcagtaaactctggctctcgcagtccgactgtttccagccaggctgctttggaagaa
atgcatcgcgccaatgaagagatagagcgctttgatatcagcgagcatgcggagcggctg
gaccagcttccaggtggggcggagatagacaccatgttggagaaacaagtgctggggatg
ctgtggagagacactgagatgaagtctctccactttcacccccatcacaaaggcggctcc
accgagcttttgtcttcaggctacggttcgtacgagtctgcaaaagagacctctgtcatc
aaaatgcggcgcagcagccccgactcctcacttcctgttggcgtcactgtcaagcaggag
tcagacgatcatgcctaa
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