Oryzias latipes (Japanese medaka): 101164496
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Entry
101164496 CDS
T02443
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 28 isoform X1
KO
K21122
ubiquitin carboxyl-terminal hydrolase 28 [EC:
3.4.19.12
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ola01002
]
101164496
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101164496
Enzymes [BR:
ola01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101164496
Peptidases and inhibitors [BR:
ola01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101164496
Ubiquitin system [BR:
ola04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101164496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UIM
GIP1_N
UBA_4
Motif
Other DBs
NCBI-GeneID:
101164496
NCBI-ProteinID:
XP_011482222
UniProt:
H2MI42
LinkDB
All DBs
Position
14:complement(25252004..25284798)
Genome browser
AA seq
1193 aa
AA seq
DB search
MIAEQTENGDQSTKSQSKMLINQLQEITGIQDQQVLYKALKASHGDVGHAVGLLTTPTVG
VQDPGEPQESATPGLPKDELQAAIELSLQESHKAQEEERELHRALEASTEENAARMKRKR
CEAQSEMCSPADWIRQDDWPVGIRNVGNTCWFSAVIQSLFHLPVFKRLVLNYHLSERILE
KCKSHADKRNIAFMQELRCLFALMVGSTRRFVDPSAAVELLRDAFRTSEAQQDVSEFTHK
LLDWLEDAFQLAANGTSAEDKQHNPMVQLFYGTFVTERKCGGKTLCNIEQFGQYPLQVNG
FNNLDECLEGAMVEKEIEPLHSDHSVTPGRERWFKKLPPVLTFELSRFEFNTQLGRPEKI
HKKLEFPQIIYMDRYLHKNLERTNERRGEVKRHKEQLAALQQKLECYKNFGSGPVKYPLA
DMLQFVLEFATTKPTSVSPATEEMRLSTASPTPPASFPHSEAVPRDSSDPEETDDGLACG
VSNCQRTPIYKPFTQCRPPIDCPPHPAPHSITEEELHFVKTCLHRWRTEVENEINELKAT
IEKVTQTLEGIYSDNSLCQVPYRLHAVLVHEGQASAGHYWAYIYDHANQRWMKYNDVSIT
ESTWEELERDSFGGMTNASAYCLMYIDDKLPHLITEDTDNETGQVLHGMDSLPSILRRYV
QEDNRWFQQELSEWEEQYCQTATPQEESAVSVDPASSSLEKVQLMPVEPQLGAPAEKLDQ
EAASKPQPNAEAPKDPGTDPGEQPEEEESAKTPTCESPGCQTEDTNATAVTDTPDSSSRL
NSDQEKLHSQTPNHDPELTNQPPSNQDVQKYDTEVKALTSEGDNESKAFRKMTDQEDVQG
GEQEEPQEDPVRQRQPENEVSEVEIPNVGRIMVRADADGYNEEMMLTPAMQGVILAIAKA
RQIFDKEGPEAGLIKAFHEEYSRLHELSQEKTTPQDDARLQHALVYFFQNKAPKRIIERT
LLEQFTDRNLSFDERAISIMREARSKLRLIKPEDMDMDEYLEWHDDYRLFRTVFVHLLTG
LEHYQHGKMQEALNYLSHAYETNNALIIKGEKRGMDKSLIAVYRRKCLMALNESASRLFR
SGEEGKVKEGVSIMEESVIPCLHLISRDTTVSQEDRDAMESVRSHWCCCLGQDMDDSLQV
KLGELLPRVLDGSAETVVLKDPPKVHVNQAHDLCSRLAAVMESIHKATIVTVT
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgaacagacagagaatggagatcagtcaacgaagtcgcagagcaaaatgctg
atcaaccaactgcaggaaatcaccgggatccaagaccaacaggttctctataaagctcta
aaggccagtcatggagatgttggacatgcagttggtctgctaacaaccccgactgtgggg
gttcaggaccctggagagccacaggaatcagcaacacctggactgcccaaagatgagttg
caggccgccatagagctgagtctacaggagtcccacaaggcccaggaagaagagcgagaa
ttacacagggctttggaggccagcacagaagaaaatgctgcaaggatgaagaggaagagg
tgtgaagctcagagtgagatgtgcagtcctgcagactggatccgtcaggatgactggccg
gtgggaatccgcaatgtgggaaacacctgctggttcagtgctgtcatccagtcacttttc
cacttgcctgttttcaaaagacttgtcctcaactaccatctgtcagagcgaatcctggag
aagtgtaagagccacgcggacaaaagaaacatagctttcatgcaggagctacgctgcttg
tttgccctcatggtaggctcaacccggcggttcgtggatccttctgccgcagtggagctg
ctgcgagatgccttcaggacaagtgaagcccagcaggatgtcagtgaatttacccacaaa
ctgctcgactggctagaggatgcgtttcaactggcagcaaatggaacaagtgcagaagac
aagcagcataaccccatggttcagcttttctacggcacttttgtaacagagcggaaatgt
ggtggtaaaacattatgtaatattgagcagttcggccagtaccctctgcaggtgaacggc
ttcaacaaccttgatgaatgccttgagggcgccatggttgagaaagaaattgaacctttg
cattcagatcacagcgtcacacctgggcgtgagagatggttcaaaaagctaccaccagtt
ttgacttttgaactttctagatttgaattcaacactcagctcggtcgtcctgagaagata
cacaagaagttagagtttccacaaatcatttacatggacagatatcttcataaaaatctt
gaacggacgaatgaaaggaggggagaagtgaaaagacacaaagaacaacttgcagctctt
caacagaaactggagtgttataaaaactttggctcaggacctgtcaaatatcccctggct
gacatgcttcagtttgttctggagtttgctactacaaaacccacgagtgtctctccagct
actgaggagatgagactatctacagcctcgccaactcctcctgctagcttcccccacagt
gaagccgtaccaagagacagtagtgacccagaggagactgatgatggtttggcttgtggt
gtttccaactgccaacgaacacccatctacaagccttttacccaatgcagaccccccatt
gactgcccaccacaccctgcacctcacagcatcactgaggaagagctgcactttgttaaa
acctgcctgcaccgatggaggacagaagtggagaacgaaataaatgagctaaaggccacc
attgagaaggtcactcagaccctcgagggcatttactctgacaacagtctctgtcaggta
ccatacagactccatgcagtacttgttcatgaaggtcaggcttcagcaggtcattactgg
gcttacatctatgaccacgctaaccagcgttggatgaagtacaatgacgtcagcatcaca
gagtcaacgtgggaggagcttgaaagagactcttttggaggcatgaccaatgccagcgcc
tactgcttgatgtacatcgatgacaagttgccccacctcattacagaagacacagacaat
gagacaggccaggtcctccatggtatggattccctaccatccatcctcaggcgctacgtc
caagaagacaaccgctggttccagcaggagctcagcgagtgggaggaacagtactgccaa
accgccaccccacaggaagagtccgcagtctctgtcgatcctgcaagctccagtttggaa
aaagtgcagctaatgcctgtcgagcctcaattaggagctcccgctgaaaagttggaccaa
gaagctgcttctaagcctcagccaaatgcagaggccccaaaggacccagggacagatcct
ggagagcaacctgaagaagaagaatcggcaaaaacaccaacatgtgagagtcctggctgc
cagacagaggacaccaacgccacagcagtcactgacaccccggattcaagcagcaggttg
aactcagaccaggaaaaactgcacagtcagactcctaaccatgatccagagctcactaat
cagccaccatcaaaccaagatgtccaaaagtatgacacagaggtgaaggcccttacttct
gagggtgacaatgaatcgaaagcctttagaaagatgacagatcaggaggacgtgcaagga
ggggagcaggaagagccacaggaagacccggtcaggcagcgacagccggagaatgaggtg
tcagaggtggagatccctaatgtgggtcgaatcatggtgagggctgatgctgatggatac
aatgaagagatgatgctgactccagccatgcagggcgtcattttagccatcgccaaggct
agacaaatctttgataaagaaggcccagaggctggcctcatcaaggcctttcacgaggag
tattcccgcctgcatgagctctcccaggaaaagaccactccgcaggacgacgctcgtctg
cagcacgctttggtctacttcttccagaacaaagcgcccaagcgcatcatcgagaggacg
ctgcttgagcagtttactgaccgcaacctcagctttgatgagagagccatcagtatcatg
agagaagcacgatccaaacttcgtctcattaagccagaagatatggacatggacgaatac
ctggagtggcatgacgactacaggctgttcaggacggtgtttgtccatctgctgaccggt
ctggaacactaccagcatgggaagatgcaagaagccttgaactacttgtctcacgcgtat
gaaaccaacaacgcactgataattaaaggggagaagcgtggaatggataaatctcttatc
gcagtttacaggaggaagtgtttaatggctttgaacgagagcgcgtcacggctgtttcgc
agtggcgaggaaggcaaagtgaaggaaggtgtttccatcatggaggaatccgttattcct
tgtcttcacctgataagccgggacacaaccgtgtcccaagaggaccgggatgctatggag
agtgtccgcagtcactggtgctgctgcctgggccaggacatggatgattcactgcaggta
aaactgggggaattgcttcccagagttctggatggttctgctgagacggtagttcttaaa
gatccacccaaagtccacgtcaaccaggcccacgacctgtgcagccggcttgctgctgtt
atggagtccattcacaaagccacaatagtaactgtgacgtaa
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integrated database retrieval system
