Oryzias latipes (Japanese medaka): 101164545
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Entry
101164545 CDS
T02443
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101164545
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ola03310
]
101164545
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
101164545
Nuclear receptors [BR:
ola03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
101164545
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
101164545
NCBI-ProteinID:
XP_023809849
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Position
4:6572084..6584085
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AA seq
473 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHRQSQECAGVGAREENADLAD
HGRNCRRGSNTTLSDLDDIPTLPGGLLFDLPLTPGDQGEYCNLDMLDGSAGSSSSLQSSP
EQTNLDFVDGNQSIKHEYQLLHDSGLFSHAILNPVPEGCSQMEIERITQNVVKSHIETSQ
FSTEELRRLAWTFYNPEETHSYISRSAETMWQKCAVQITNAIQYIVEFAKRISGFMDLCQ
NDQIILLKAGCMDVLLIRMCRAYNPINNTLFFDGKFAGAQLFKALGCDDLVSAIFELAKS
LSRIQMTEEEMALFSAAVLLSPDRPWLTDVQKVQKLQKKVYVALQRCLQNKGASEEKLAK
MVSKLPLMRSICNLHIDKLEFFRLVHPETAYSFPPLYREVFSSEIPFPDSTEG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcagatagaagtaatcccgtgtaaaatctgtggggacaagtcttcagggatt
cactatggtgtcatcacctgtgaaggctgtaagggcttctttcgacgcagtcagcagaac
aatgctatgtactcttgctcacgacaaaggaactgccttattgaccggacgaaccggaac
cgatgccagcactgcaggctgcagaagtgtctggctctgggcatgagccgcgatgctgtg
aaatttggccgcatgtccaaaaagcagcgagatagcctgtatgctgaggtccagaaacac
cggcagtcccaggagtgtgccggggtcggcgcacgtgaggagaatgctgacctggctgac
cacggccgcaactgcagaagaggctccaacaccacgctcagcgacctagacgatatcccc
acactgccaggaggcctgctttttgacctgcccctgaccccgggggatcaaggtgaatac
tgcaacctggacatgctggacgggagcgccggcagcagctcttccttgcaaagctcacca
gagcagaccaacttggactttgttgatggaaaccaaagcatcaagcacgagtaccagctg
ctgcacgattctggactcttctcacacgcaatccttaacccggtaccagaaggctgctcc
cagatggaaatagaacgcataactcagaacgtggtgaagtcccacattgaaacaagtcag
ttcagcacggaggagctgaggagattggcctggaccttctacaatccagaggagacgcac
tcatacatcagcaggtctgcagagacgatgtggcagaagtgcgctgttcagatcaccaat
gcgatccagtacatagtggagtttgccaagcgcatatctggattcatggacctttgtcag
aacgatcagatcatcctcctgaaagcagggtgcatggatgttcttctgatccggatgtgt
cgcgcctacaaccccatcaataataccttgttcttcgatgggaagtttgccggcgcccag
cttttcaaagctctgggctgcgacgacctggtgagcgccattttcgagctggcgaagagc
ctgagccgcatacagatgacagaggaagaaatggctctcttcagcgctgcagtgctgctc
tcgcccgaccggccgtggctgactgacgtccagaaggttcaaaagttgcagaagaaggtt
tacgtagctcttcagcgctgcctgcagaataaaggagcgtctgaggagaagctggccaag
atggtgtccaaactgcccctaatgaggtcgatttgcaaccttcacattgacaaactggag
tttttccgtctggtccaccctgagaccgcctacagctttccccctctgtaccgagaggtt
ttcagcagcgagattcccttcccggactccacagagggctaa
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