Oryzias latipes (Japanese medaka): 101164657
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Entry
101164657 CDS
T02443
Name
(RefSeq) chondroitin sulfate proteoglycan 5 isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ola00535
]
101164657
Proteoglycans [BR:
ola00535
]
Cell surface proteoglycans
Others
101164657
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neural_ProG_Cyt
Cadherin_C_2
EGF
DUF6526
PIRT
LapA_dom
EphA2_TM
DUF6377
Motif
Other DBs
NCBI-GeneID:
101164657
NCBI-ProteinID:
XP_011479099
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All DBs
Position
11:complement(9408388..9426898)
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AA seq
463 aa
AA seq
DB search
MARGDARLWSWQVLLAISMVITSLSAHGRHSLVKRHHHHNHSSVNKEALDTRMVLSDDSA
EKDHLIGAGHRPSLPLHSTRHHRFHKHHYLDFAEEGTPVAEELTAGGGPDAHGNSLSDDV
IPVKFHSPAPDVVPSDVALDWAKVPKPQKQKSGDSTQWGLSDFYDDPAPDDDLSALDSTP
APDPTPSPPPDVDDENPLLPGTPAVFNEVGPKMDTGSSPAAGPIPSPDPDQGLGVGGAMG
ADGCRLGFVLSGPGVCVAQCDTEPNFCFNGGVCTVVPGSGAFCRCNVQEYIWNKGTRCEW
AVTEFQVLCMVVGVASVVLLMLFMIIVFFAKRLYQLKNENRRLRKRSKYRTQSSEPQTDG
LSVSTTADSSQPNVRKLCDTPPPAPQAHTHNLAYYDNIICQDEPQKKDNQAKSPPSKEEG
SMNILNSHSPKHENNRPASIIHGSTPNSTEENAEVNKLQNNLV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcggggacgctcgtttgtggagctggcaggtgcttttggccatctcgatggtc
atcacctccctgtctgctcacggaagacattcactcgtcaagcgccatcatcaccacaac
cactcgtctgtcaacaaggaggccttggacaccaggatggtccttagcgatgactcggca
gaaaaggaccacctcattggagcaggacacagaccaagccttccactccattctaccaga
catcaccgctttcataaacaccattacctagattttgctgaagagggcacacctgtggca
gaggagctaactgccggcgggggaccagatgctcatgggaattccttgtccgatgatgta
atccccgttaagtttcatagccctgccccagacgttgtgccctctgatgtagctttggat
tgggcaaaagtccccaaaccgcaaaagcagaaaagtggggactccacccaatggggactg
tctgacttttacgacgacccagctcctgacgacgatctctcagcattagattcaactcct
gcacccgatcccactccgtcacctccacctgatgtggatgatgagaatccactcctgccc
ggaaccccggcagtttttaatgaagtggggccaaaaatggacactggatcatctccagca
gctggtcccatcccaagcccagacccagaccagggtttaggtgttggtggagccatgggt
gcagatggttgtaggctgggctttgtactttctggacctggagtttgtgttgctcagtgc
gacacggagcctaatttctgcttcaacggaggagtgtgcaccgtagtaccagggagtgga
gccttctgcaggtgcaacgtgcaggaatatatctggaacaaaggcacgcgttgcgaatgg
gctgtcacggagttccaggtgttgtgcatggtggtgggcgtggcctctgttgtgctccta
atgctcttcatgatcatagtattttttgccaaaagactttaccaactcaagaacgagaac
aggcgccttcgcaaacgcagtaagtaccgcacacagagcagcgagccacagacagacggc
ctctccgtttcaactacggcggacagctctcaaccaaatgtaaggaaactctgtgacacc
cccccgcctgcaccccaagctcatactcacaacctggcgtactatgacaacattatctgt
caggatgagccccagaagaaggacaaccaagctaagtcccctccatccaaggaagaaggc
tctatgaacatcctcaactctcattctccaaagcacgagaacaaccgccctgcttccatc
atccatggaagcacccctaacagcacagaagaaaatgctgaggtaaacaagctccagaac
aacctggtgtaa
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