Oryzias latipes (Japanese medaka): 101164686
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Entry
101164686 CDS
T02443
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K18343
ubiquitin thioesterase otulin [EC:
3.4.19.12
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101164686
Enzymes [BR:
ola01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101164686
Ubiquitin system [BR:
ola04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
101164686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C101
Peptidase_C65
Motif
Other DBs
NCBI-GeneID:
101164686
NCBI-ProteinID:
XP_004081364
UniProt:
H2M840
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All DBs
Position
20:20812656..20828843
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AA seq
712 aa
AA seq
DB search
MGNSCCRADSPCATAEEKSGLLSDESKAMSNSVKKTGACGPEGSDERSQSPEEEASKVPV
QQCPDNEDTEPNNTQENGPFQNKGLQEAAPSPSKMPENSTPAQDEETKVIPAEGDRAENL
QCTLNSQQKDPPTTDAAGIVALNAEPKKEELTLVQDETPNAVVIPSLPEKATPEPTAANA
TVDEVSKEVIASAAKPSEESAQSDEGSSVPSCQPTAAAGGAASISAATEETAPDTLSCTP
SEDLNTGCASVRGEDDASEDVKSHNVSQICFGSGDEEEEEDKEKQEEDLHSVKELEATSP
TDSKDSSKSGQDTQPHPECSSSACSDQEVSSEKSKQDAEEEEPLEAPDEGVLEAEKDEEI
QEEDEETEHGQAEPQEEVTADEEQLEGSSHSKAEAGPAAEKEADLGSSEEDLYRGAEELS
SSVGSSDLEIFKLEERCSLSPAVDVLFYSEREWKGNTAKSALIKKGYKEMSQKFSSLRRV
RGDNYCALRATLFQVLSQSTHLPAWLQEDDATMLPEKLESLEGLINQWRFPGDVTGDASQ
QLRGYLELLRKTWRAAVDCASAAERQQLCERVFQCGEEELGLLEALKLLMLGRAVELHGR
MQRGDEDVPLFCWLLFARDSSDCPRSFLSNHLRHVGLTAGLEQVEMFLLGYALQCTIQVF
RLYKADTEEFVTYYPDDHKDDWQTVCLVTEDDRHYNVPVVKAAEPQEELASR
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggggaacagctgttgccgtgctgacagtccctgtgccacggcagaggaaaaaagtggt
ttgctgagcgatgagtcaaaggccatgagcaacagcgtcaagaaaaccggtgcttgtggt
ccagaaggaagtgatgaaagaagccaatctccagaagaagaggccagcaaagtgcctgtg
cagcagtgtcctgacaatgaagacacggagcccaacaacactcaggaaaacggacccttt
cagaacaaaggccttcaggaagcggcgccttctcccagcaaaatgcccgaaaactccacc
ccagcacaagacgaggaaaccaaggtcatccctgctgaaggagaccgagctgaaaatcta
cagtgcactttaaactcgcagcagaaagacccccccacaacggatgctgcgggtattgta
gccttaaacgcagaaccaaaaaaagaggagctgacgttggtgcaggatgaaaccccaaac
gccgtcgtgatcccttcacttcctgagaaagccacgccagagcccaccgcagcgaacgcc
actgttgatgaagtctccaaagaggttatcgcttccgcagccaagccgtcggaggagtct
gctcaaagtgatgaaggatcgtccgtgccaagctgtcagcccaccgcagccgctggtggg
gcggcgtccatctctgcagccacagaggagacagcgccagacactctgagctgcactcct
tcagaagatttgaacaccggctgcgcttcagtgcgcggggaggacgacgcttctgaggat
gtgaaaagccataacgtctctcagatctgttttggttcgggcgatgaggaggaggaggag
gacaaggagaaacaggaggaggaccttcactcggtgaaggagctggaggccacatctccc
acagattccaaggacagctcaaagtctggtcaggatacacagccacatccagagtgttcc
agctctgcgtgctcggaccaagaggtttcctcagagaagagcaaacaggatgccgaggag
gaagagcccctcgaggcgccggatgaaggcgttctcgaagcggagaaggatgaagaaatc
caagaggaagacgaggagacggagcatggtcaggctgagcctcaggaggaggtgaccgcc
gacgaagagcagctggagggaagctcccacagcaaggctgaagctggacctgctgcagag
aaagaggctgacctgggaagcagtgaggaagacctttacagaggagccgaagagctgtct
tcctccgtgggatcatcggatttagaaatttttaagttggaggagcggtgcagcctgtct
ccggctgtggacgtcttgttctacagcgagagggaatggaaggggaacaccgccaaaagt
gcgctcattaaaaagggatacaaagagatgtcccagaagttcagcagcttgaggagagtg
aggggcgacaactactgcgccctcagagccacgctgttccaggtgttgtcccaaagcacc
cacctgcccgcctggctgcaagaggacgacgccaccatgcttccagagaaactggagtcc
ctggaaggcctgataaaccagtggaggtttcctggagacgtcacaggagacgccagccag
cagctgagaggatatctagagcttctgagaaaaacgtggcgggcggcggtggactgcgcc
tcggcagcagagcggcagcagctctgcgagcgagtcttccaatgcggagaggaggagctc
gggctgctggaggcgctcaagctgctgatgctgggcagagcggtggagctgcacggccgc
atgcagcggggggatgaagacgttcctctcttctgctggctgctgtttgcccgggactcg
tccgactgtcctcggtccttcctctctaaccacctcaggcacgtgggcctcaccgccggg
ctggagcaggtggagatgttcctgctgggctacgccctgcagtgcaccattcaggtattc
agactttacaaggcagacacagaggagtttgtcacttactacccagacgaccataaggac
gactggcagaccgtgtgccttgtcaccgaggacgaccggcactacaacgtgccggttgtg
aaagctgcagagccacaggaggagctggcctcccgctga
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