Oryzias latipes (Japanese medaka): 101164789
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Entry
101164789 CDS
T02443
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04260
Cardiac muscle contraction
ola04261
Adrenergic signaling in cardiomyocytes
ola04814
Motor proteins
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
101164789
04820 Cytoskeleton in muscle cells
101164789
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
101164789
04261 Adrenergic signaling in cardiomyocytes
101164789
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
101164789
04147 Exosome [BR:
ola04147
]
101164789
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
101164789
Exosome [BR:
ola04147
]
Exosomal proteins
Exosomal proteins of microglial cells
101164789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
Crescentin
DUF745
DUF3450
ATG16
PUMA_CC
TMF_DNA_bd
Lebercilin
CENP-F_leu_zip
ERM_helical
Laminin_I
DUF16
SlyX
DUF1664
DUF5930
Fez1
Motif
Other DBs
NCBI-GeneID:
101164789
NCBI-ProteinID:
XP_004067324
UniProt:
A0A3P9JY86
H2MA79
LinkDB
All DBs
Position
3:26467042..26474782
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AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAESDKKASEDRSKQLEDDLVALQKKLKATEDELDKY
SEALKDAQEKLELAEKKATDAEGDVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRAMKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSEGKCSELEEELKTVQNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYSQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaaaaagatgcagatgctcaagctcgacaaggagaatgccttggat
agagctgagcaggccgagtcagacaagaaagcatcagaggacagaagcaaacagcttgag
gatgacctggtggcactgcagaagaaactgaaggcaactgaagatgagttggacaagtac
tctgaggccttgaaggatgcccaggagaaacttgagctcgcagagaagaaagccacagat
gctgagggagatgtagcctccttgaacagacgtattcagctggttgaggaggagttggac
cgtgctcaggagcgtctggccacagctcttaccaagctggaggaggctgagaaggctgct
gatgagagtgaaagaggcatgaaagtcattgagaacagggcaatgaaggatgaagagaag
atggaactgcaggagatccagctgaaagaggccaaacacatcgctgaggaggctgaccgt
aaatacgaggaggttgcccgtaagctggtgatcattgagagcgacttggaacgtacagag
gagcgtgctgagctgtctgaaggcaaatgctctgaacttgaggaggagctgaaaactgtg
cagaacaacctgaagtctctggaggctcaggcagagaagtactcgcagaaggaagacaag
tatgaggaggagatcaaggttcttacagacaagctcaaggaggctgagacccgtgctgag
tttgctgagagatcagtcgccaagcttgagaagaccattgatgaccttgaggatgagctg
tattcccagaagctgaagtacaaggccatcagcgaggagctggaccatgccctcaacgac
atgacatccatctaa
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