Oryzias latipes (Japanese medaka): 101164818
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Entry
101164818 CDS
T02443
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04810
Regulation of actin cytoskeleton
ola05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101164818
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101164818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101164818
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101164818
Factors involved in mRNA localization
Other mRNA localization factors
101164818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
101164818
NCBI-ProteinID:
XP_023815100
LinkDB
All DBs
Position
10:21198220..21216903
Genome browser
AA seq
1252 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
LQVVPLFGDMQIELSRYIETSAHYEENKSKWTCTQSSISPQYNLCEQMVQIRDDHIRFIS
ELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTDK
FCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIYA
ALQDFAQMTLREPLRQAVRKKKNVLISVLQAIRKTVCDWEGAREPPNDPCLRGEKDPKGG
FDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVQAIEDFHKQSFFF
THLLNFSEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMME
YVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSVL
LDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLDH
AISRFESEDLTSIVELEWLLEINRLTHRLLCKHLTLDSFDAMFREANHNVSAPYGRITLH
VFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHIY
SSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRL
PRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCDL
LHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLLT
KERLCCGLSMFEVILTRIRSFLQDGVWRGPPPTNGVMHVDECMEFHRLWSAMQFVYCIPV
GTHEFTAEQCFGDGLNWAGCAIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPLK
KMADRIRKYQILNNEIFAILNKYMKAVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcacgtgacgctggaagatgctctgtccaatgtggacctgctggaagagctg
cccctgccagaccagcagccatgcatcgagccccctccctcctccatcatgtaccaggcc
aactttgacaccaactttgaagacaggaatgcgtttgtgacgggcatcgctcgctacata
gagcaagccacagtccactccagcatgaacgagatgctggaagaaggacatgagtatgct
gtgatgctttacacctggaggagctgctccagagccattcctcaggtgaaatgcaacgag
cagcccaacagagtggagatctatgagaaaacagtggaggttctggagcctgaagtgacc
aagcttatgaagttcatgtacttccagaggaaagctatagaacgcttctgcagtgaagta
aagcgactctgccacgctgagagaaggaaagacttcgtgtcagaggcgtatctgctcacc
ctgggaaaattcatcaacatgttcgcagtgctggatgagctcaagaatatgaagtgtagt
gtgaagaacgatcactctgcttacaaacgagctgctcagttcttgaggaagatggccgac
cctcagtccatccaggagtcccaaaatctttccatgtttttagcaaaccataacaggatc
actcagtgcctgcaccagcagctggaggtgattccaggatatgaagaacttttggctgat
attgtcaacatctgcgttgactattatgagaacaaaatgtatttgacgccgagtgagaaa
cacatgctgctaaaggttatgggctttggtctgtacttgatggatggaaatgtaagtaat
atctacaaattagacgccaagaagaggatcaacttgagcaagattgacaaattcttcaaa
cttcaagtcgtaccactttttggagacatgcagatcgagttgtcacgctacatcgagaca
agtgctcactacgaggaaaacaagtccaagtggacgtgcactcagagcagcatctcaccg
cagtacaacctgtgtgagcagatggtgcagatcagggacgaccacattcgcttcatctcg
gagcttgcgcgctacagcaacagcgaagtggtgacgggttccgggctggacagccagaag
tctgatgaggagtacagggagctgtttgacctggctctgaggggtctgcagctgttgtca
aagtggagcacccacgtcatggaagtgtactcatggaagttggtacatcccacagataaa
ttctgtaataaggactgtccaggcacagcagaagagtatgaacgcgccacaaggtacaac
tacaccagtgaggagaagtttgccctggtggaggtcattgctatgattaaagggctgcag
gtgctcatgggtcgtatggagtcggtgttcaatcaggctatcaggaatacaatctatgca
gccctgcaagactttgctcaaatgaccctcagagagccgctacgccaagcggtgcgcaag
aagaagaatgtcctcattagtgttctccaggcaattcgaaagactgtctgtgactgggaa
ggagcaagagagcctccgaatgacccctgtctgagaggcgaaaaggatccaaagggcggt
tttgacatcaaggtgccccgtagagctgtgggaccctccagcacccagttgtacatggtc
cgcaccatgctggagtccctgatagcagacaaaagtggatcgaagaagactctccgcagc
agtttggatggacccatagtgcaggccatcgaagatttccataagcagtccttcttcttc
acacatttactgaactttagtgaggccctgcagcagtgctgcgacctgtcccagctctgg
ttcagggagttcttcctggagctgaccatgggccgcagaatccagttccccattgaaatg
tccatgccatggatccttactgaccacatcctggagacaaaggagccttccatgatggag
tatgtgctgtacccccttgatttgtacaacgacagtgcctactatgctcttacaaagttt
aaaaagcagttcctctatgatgaaattgaggctgaggtaaacctgtgctttgaccagttt
gtctacaagttggcagatcagatctttgcctattataaagcaatggctggcagtgttctg
ctagacaagcgtttcagggcagagtgtaaaaactacggggtcatcatcccgtaccctcca
tcaaaccgctacgagacgctgctcaaacagagacacgtacagctgctgggtcgctcgatt
gacctgaaccgcctgatcacccagagaatctcggcagcgatgtacaaatccttggatcat
gctattagccgttttgagagtgaagacctcacctccatagtggagttggagtggctcctg
gagatcaacaggctaacccacagacttctgtgcaaacacttgacgctggacagctttgat
gccatgtttcgtgaggccaaccacaatgtctctgctccctacggacgaatcacgctccac
gttttctgggaactcaacttcgattttctcccaaattactgctacaacggatcaacgaac
cgctttgtgcgaacagctattcctttcacccaggagcctcaaagagacaagccagccaat
gtgcagccttattacttgtatggatccaagcctctgaacatcgcctactcccacatatac
agctcctatagaaacttcgtcggcccgcctcacttcaagaccatctgccgcctgcttggt
taccaaggcatcgctgtcgtgatggaggagctgctgaaaattgtcaagagcctgttgcag
ggcaccatactgcaatatgtgaaaactctgatagaagtcatgcccaagatctgccgtcta
ccgcgccatgagtatggttcccccggaatcctggagttctttcatcatcagctcaaggat
atcattgaatacgctgagctgaagacagatgtctttcagagcttaagggaggtgggaaac
gctatcctcttctgcctgctcatcgaacaagctctgtcccaggaggaagtgtgcgacctg
cttcacgctgcccccttccagaacattctgcctagagtctacatcaaagagggagagcgt
ttggaggtgaggatgaagagactggaagcaaagtacgccccacttcaccttgtgcctcta
atcgagaggctgggaaccccgcagcaaatagccatcgcacgagagggtgacctgttgacc
aaagagcgcctgtgctgcggcctctccatgtttgaggtcattttgactcgcatccgcagc
ttcctgcaggacggcgtgtggcgcgggcccccgcccactaacggagtgatgcatgttgat
gagtgcatggagttccaccgcctgtggagtgccatgcagtttgtctactgcatccctgta
ggcacacacgagtttacagcagaacagtgctttggtgatgggctcaactgggcaggctgt
gccattattgttctgctgggacaacagcgacgcttcgatctatttgatttttgctaccat
ctgctgaaagtccaaaggcaggatggcaaggacgagatcatcaagaatgtgcccctgaag
aagatggcagaccggattagaaagtaccagatcctcaacaatgagatatttgccatcctg
aacaagtacatgaaggcagtagaaacagacagttccactgtggagcatgttcgctgtttc
cagcctcctatacaccaatccctggccaccacctgctga
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