Oryzias latipes (Japanese medaka): 101164844
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Entry
101164844 CDS
T02443
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola02010
ABC transporters
ola04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101164844
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101164844
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ola02000
]
101164844
Transporters [BR:
ola02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
101164844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
AAA_15
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
101164844
NCBI-ProteinID:
XP_023821564
LinkDB
All DBs
Position
18:complement(8707729..8916267)
Genome browser
AA seq
2068 aa
AA seq
DB search
MGLLTQFSLLLWKNFTLRKRQKVRLLVEILWPLFLFVILVAVRTTTKPVNKGQCHYPNKA
MPSAGLLPWLQGMMCNIDNPCYNDPTPGETPGQVNNFNNSIASQILINVQNLLLELSNGQ
GYLESKADVLVNSTNKALKSLDFQNDPIGSFSMFLCGKKPSFNSTFRFPTSDQQDTMNSS
FQNSQDSDPFCTTLIDTMVTTPSMQFLWKNFRPLLKGKVLYTPDTPAARLLVEEANATFM
ALAAIKEFADSWGEDGPFVWGFVENGTAVVNESSANSNNSSTDTPPTSEDAYNDLTHFLK
LLSKVLGCFELNKFEAVPTEYELVTEALEHLKNDTFWAGIVFENLQPNSSSIPPYLKYKI
RMDVEEVQRTDKVENRLWSPGANDNPYENLRYIWGGFAYLEDIIDHASIRLQTSTSQPLG
VYVQQMPYPCYVDDPFIQSIGAILPMFLILAFMSSVAMTIKGLVLEKELRLKEVLRGVGI
QNGALWSSTFTETMILLTVPCVLMSVMVKYGKVLQYSDPSVVFIFLLVFCLSTISECFLI
SVFFSKANLAAACGGLIYFLLYLPHVLCYAWRDVMGFQAKVGVSLLSCVAFGYGCENLSK
FEEQGVGIQWHNIATSPEEGQRYTFIVSILMMLLDAAIYWVLTWYIENVFPGQYGIPRPW
YFLFTYSYWFGKTSVPEDIPDNFKLLKRSSVPNEFLEKPDPNMKAGVSIRNLVKIYKTGK
KVAVDGLSVDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDIRTDMDNIR
KYLGMCPQHNVLFDELTVEEHIYFYGRLKGLNPSELQTEMDQMIKDVGLLHKRKDLVKNL
SGGMQRKLSVAIAFVGGSKIVFLDEPTAGVDPFARRGIWDLLLKYKKGRTIILSTHHMDE
ADILGDRIAIISHGKMRCCGSSIFLKKSFGSGYYLTLVRSGTEVMTAQRSGIISGIAEEK
PTESDCPSSSSLDEDRGCQSSDNSNPTDLKHVTQFVRRHVPEAVFLESIGQEITFILPYA
RARDGTFATLFQELDKVMDKLGLTSYGVSDTTLEEIFLKVAEDTGVDKELSPTKEPVVKD
YKKDSRESKRRSMSRFHGKAAKGNTKDELKKKLSNKVEDFKKSASVNGRGSVVITGWKLI
RQQFLALFIKRFHHARRSRKGLIAQVVLPAIFVCLALVFSLIVPSFTDYPSLELQPWMYN
SQTTFYSNDMPEDANVSRVVETLVDNPGFGTRCMEGNPIPRLPCSSGASDWFSPSVDQSV
ADIFLNGNWSMSNPSPSCQCSTPGRTIIMPDCPPGAGGLPPPQRVQNTTDTLLNLTSINM
TDFLLKTYEHSGKKRYGGISVGGINSQVLLTEVEIEEAFANLEPPGYGDTIQKAEMVLKK
LGTRNNVKVWFYNKGWHSMVSFLSVVNNGILRGYLPEGQNLRQYGLSVSNHPLNLSKEQL
SLSAMASTSSDVVVSICVIFAMSFIPASFVLFLIQERVSKAKHLQFVSGVNPTVYWVASF
VWDICNYVIPCFLVVGIFICFQQKAYVSPQNLPALILLLVMYGWAITPMMYPASFIFTVP
STAYVVLTCLNLFIGINGSVATFVMELFEDESITKINNIVKQVLLIFPHFCLGRGLMDMA
RNQAMANVFSNFGEDRFEDPLSWNMVGKNLIAMSIQGAVMFAFTLLIQYKFFYKPRLSLP
KVQSEEKEDVDVARERQRVHEGRANNDVLRICDLTKVYPRKSTPAVYRLCVGVPAAECFG
LLGINGAGKTTTFKMLTGDIPVSSGEAFLNGYSIRTQMGDVHQNMGYCPQFDAINDLLNG
REHLELYARLRGVPEEEVAMVAEWGIQKLGLVKYANKSAGTYSGGNKRKLSTAMALIGCP
PVIFLDEPTTGMDPKARRFLWDCILSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFQ
CLGSIQHLKNRFGDGYTLIVRVGGCPPDLKPVEDFVEETFPGTVLKEKHHNTLQYQLLSQ
EGALAKIFTELTDHQQELGLEDYSVSQTTLDQVFVNFAKEQHDEEDLQAHDNPVDLSDEF
PLKKVETVSAANEVSWLKPDDALFKAQQ
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttctccctgctcttgtggaagaacttcactctccggaagaga
caaaaggtgcggctgctggttgagatcctgtggcctctcttcctgttcgtcatcctggtg
gccgtcagaaccaccaccaagcccgttaacaaaggacaatgtcactacccaaacaaagcc
atgccgtcagctggccttctgccctggctccaaggtatgatgtgcaacattgacaacccc
tgctacaacgatccgacgccaggagagacgccaggccaagtcaataacttcaacaactcc
atagcgtctcagatcctgattaatgtgcaaaacctcctgctggaactatcaaatgggcaa
ggatacctggagtccaaagcagatgtgttggtgaactccaccaataaagcactgaagtcc
ttggacttccaaaacgacccgatcggaagtttttccatgtttctgtgcggaaagaagccg
agcttcaactccaccttccgattcccaacatctgaccaacaggatacaatgaattcctcc
ttccaaaatagccaagattccgatcccttttgtacaactttaatcgacactatggtgacc
acacctagcatgcagtttctttggaaaaacttcaggccgctgttgaaagggaaagtcctc
tacacgcctgacacgcctgctgctcgcctcctggtggaagaagctaatgccacattcatg
gccctggctgcaataaaggaatttgccgattcgtggggtgaagacggaccgtttgtctgg
ggctttgtggaaaacggcactgctgtggtgaacgagagctctgcgaactccaataactcc
agcacagacactccacccacttcagaagatgcttataacgaccttacacacttcctgaag
ttactttccaaggtcctcgggtgctttgagctgaataagtttgaggcggttcccactgaa
tatgaactggtgaccgaagccctggagcacctgaagaacgataccttctgggcggggatt
gtctttgaaaatcttcaaccgaattccagcagcattccgccctacctcaagtacaaaatc
cgcatggacgtcgaggaggtgcagcgaacggacaaagtggaaaacaggttatggtctcct
ggagctaatgacaacccatatgagaacctacgctatatttggggaggcttcgcctacctg
gaggacataatagaccatgccagcatccgactccaaacatcgacgagtcaaccgctcggt
gtctatgtccagcaaatgccatatccctgctacgtagatgaccccttcatacagagtatt
ggcgccattctccccatgttcctcattctggctttcatgagctccgtggccatgaccatc
aaaggcctggtgctggagaaggagctccggcttaaggaagtactgcgtggcgttggcatt
caaaacggtgccctgtggtcgtcaacgttcacagaaaccatgattctgctcacagttccc
tgtgtgctcatgagtgtcatggttaagtacggaaaagtcctgcagtacagcgacccctct
gtcgtctttatcttcctcctggtgttttgcctctccaccatctctgagtgcttcttgatt
agcgtcttcttctccaaagccaacttagcagcagcgtgtggcggcctcatctactttctc
ctctacctgccccatgttctgtgctacgcatggagggatgtcatgggctttcaggccaaa
gttggagtgagtctactgtcatgcgtggcctttggctacggctgcgagaacctctccaag
tttgaggagcaaggcgttgggattcagtggcacaacatcgctacgagtccagaggaagga
cagcgctacaccttcatcgtctctatactgatgatgcttttagatgctgccatatactgg
gtgctcacctggtacattgagaacgtttttccaggtcaatatggaatccctaggccgtgg
tacttcctcttcacttattcttattggttcggaaaaacatcagttcccgaggacatccca
gataactttaagctgctgaaacgctccagtgtaccaaatgaatttttggagaaaccagat
cctaacatgaaggctggggtttccatccgtaaccttgtcaaaatctataagactgggaag
aaagtggcagtggacgggctgagcgtggacttctatgagaatcagatcacatctttcctt
ggccacaacggagcaggaaaaacaactacaatgtcaattctgacaggcttgtttccacct
acttcgggaacggcgctcatcaacggctacgacattcgcaccgacatggacaacattcgg
aagtatctgggaatgtgtcctcaacacaatgtcctatttgacgagctgacggttgaggag
cacatatacttctacgggcgtctgaaaggactcaaccccagcgagcttcagaccgagatg
gaccagatgattaaagacgtcggcttattgcacaagcgaaaagaccttgttaagaacctg
tcaggtggcatgcagagaaagctgtcggtggctatagcatttgttggcggttcaaaaatt
gtcttcttggatgaacctacagcaggagtggacccttttgcccgcagaggtatctgggac
ctgttgttaaaatacaaaaaaggtcgaacgatcatcctgtccacacaccacatggacgag
gccgacatcttgggcgatcgcattgccatcatctcccacgggaagatgcgttgctgcggc
tcctccatctttctgaagaagagctttggcagcggttactacctcacgctggtccgaagc
ggcacagaggtcatgacggcgcagagaagtggcatcatctctggcatcgcagaggagaaa
ccaactgagtcagactgtccttccagtagcagcctggatgaagatcgtgggtgtcaaagc
tcggacaactcaaatccaacagatctgaagcatgtgactcagtttgtgaggaggcatgtt
cccgaggcggtgttcctggagagcatcggtcaggagatcaccttcattctgccctacgcc
agagccagagatgggacctttgccacgctcttccaggagcttgacaaagtcatggacaaa
ctgggcttgaccagctatggtgtctctgacaccacgctggaagagatatttcttaaagta
gcagaagacacgggagtcgacaaagaactatcaccaacaaaggagccagtggtgaaagac
tataaaaaagactccagagaatccaagaggaggagcatgtccaggtttcatggcaaagca
gccaaaggcaacacgaaggatgagttaaagaaaaagttgtccaataaagtagaagacttt
aagaagagcgccagtgtcaacggaaggggatctgtggtcatcaccggatggaagctcatc
agacagcagttcctggcgctcttcatcaaacgcttccaccacgcccgacgaagccgcaag
ggactcattgcccaggtggtccttcctgctatttttgtatgcctggctttggtcttctcc
ctcatcgtgccgtcgtttactgactatccaagcctggagctccagccgtggatgtacaac
tcccagaccacattttatagcaacgacatgccagaggatgcgaatgtatctcgggtggtg
gaaactttggtagacaatcctggatttggtacgcgctgcatggaaggaaaccccataccg
cgactgccgtgttcctccggcgcctctgattggttctctccttctgtggatcagtcagtt
gctgacatcttcctcaacgggaactggagcatgtctaacccctctccctcgtgtcagtgc
agcactcccgggcggaccatcattatgcctgactgcccgcctggtgcagggggactccct
ccacctcagagagtacagaacacaacggacaccttacttaacttaactagcataaacatg
acagacttcttgctgaagacatatgagcactcaggaaaaaaaagatatggcggcatctca
gtcggaggcatcaactcccaagtccttttgactgaggttgaaatcgaggaagccttcgcg
aacctagaaccacctggatatggggacactatccagaaggcagagatggtgctgaagaag
ctggggaccagaaacaacgtgaaggtgtggttctacaacaaaggatggcacagcatggtc
tccttcctcagtgtggttaacaatggcatcctaagagggtacctaccagaggggcagaat
ctccgccagtacggcctctccgtgtcaaatcaccccctcaacctgtccaaggagcagctg
tctttatccgccatggcttcaacttcctctgacgtggtggtgtccatctgtgtcatcttc
gccatgtccttcatccccgccagcttcgttctcttcctcatccaggaaagggtcagcaaa
gccaagcatcttcagttcgtgagcggcgtaaacccgacggtctactgggtcgccagtttt
gtctgggacatatgtaattacgtcatcccctgctttctcgtggttgggatctttatctgc
tttcaacaaaaagcctacgtttcccctcaaaacctgcccgcactgattctactgcttgtt
atgtatgggtgggccatcacccccatgatgtacccagcttcattcatcttcacggtgcct
agcacggcgtacgtggtgctgacctgcctcaacctcttcatcggcattaacggcagcgtg
gccacctttgtcatggagctctttgaggatgaaagcatcaccaaaatcaacaacatcgtc
aagcaggtgctgctgattttccctcatttctgtctgggcaggggactcatggacatggcg
agaaatcaggccatggcgaacgtttttagcaactttggtgaagatcgttttgaagaccct
ttgagctggaacatggtgggaaaaaacctgattgccatgtccattcaaggagctgtcatg
ttcgcatttaccctcctaatccagtacaagttcttctacaaaccgaggctctctctgcca
aaggtccaatcggaggagaaggaggatgttgatgttgcccgggaacgccagcgggtgcac
gagggccgagctaacaacgacgtgctgaggatctgtgacctcacaaaggtttacccccgg
aagagcaccccggctgtgtaccggctgtgtgtgggcgtacctgccgcagagtgcttcggc
ttgctggggataaacggagctgggaaaactaccacgttcaagatgctgacaggagacatc
ccagtctctagcggagaggcctttctaaatggatacagcatccggacccaaatgggtgac
gttcaccaaaacatgggctattgtcctcagttcgacgccatcaacgacctgctgaacgga
cgggagcatctggagttgtacgcccgcctcagaggagtaccagaagaggaggttgccatg
gtggcagagtgggggatccagaagttggggctggtcaaatatgccaataagtcggcggga
acttacagcggcgggaacaagcgcaaactttccacggcgatggctctgatcggatgcccc
cctgtgattttcctggacgagccaaccaccgggatggaccctaaagctaggcgtttcctg
tgggactgcatattgagtgtcatcaaagagggccgttcggtcgtcctcacgtcacacagc
atggaagaatgtgaagcgctgtgcacccgcatggctatcatggttaatggccgcttccag
tgccttgggagcatacagcacttgaagaacagattcggcgacggctacacgctgattgtg
agggtcggcggctgtcctcctgacctgaagccagtcgaagactttgttgaggaaactttc
ccgggcaccgttctcaaggaaaaacaccacaacacgctgcagtaccagctcctgtcccag
gagggagccttggctaaaatctttactgagctcaccgaccatcagcaggaactgggcctg
gaggactactcggtgtcccagaccactctggatcaggtgtttgtgaattttgcgaaggag
cagcacgacgaggaagaccttcaggcccatgacaaccccgtggacctctccgatgagttc
ccgctgaagaaagtggagaccgtttcagcagccaatgaggtttcctggttaaagccagac
gatgcacttttcaaggctcagcaataa
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integrated database retrieval system
