Oryzias latipes (Japanese medaka): 101164894
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Entry
101164894 CDS
T02443
Name
(RefSeq) neuronal pentraxin-2 isoform X1
KO
K25709
neuronal pentraxin
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
101164894
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Gene cluster
GFIT
Motif
Pfam:
Pentaxin
Laminin_G_3
SlyX
DUF2203
DUF4407
HrpB7
DUF7310
Laminin_G_2
Fib_alpha
CorA
DUF7615
BAR_4
Motif
Other DBs
NCBI-GeneID:
101164894
NCBI-ProteinID:
XP_004071518
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Position
8:12759294..12778338
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AA seq
449 aa
AA seq
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MLALLVGLLYLVSGRSVRSQDATGSRFVCNAIPPGAEPGCGYGASVNRVQSSSPVEDELR
NTIIQLRETILQQKETIVSQQGTIKELNSKLARCEAAADEMAQGKSRGQGSRRKEYGKNT
MGDLPRDPSETIDQLGKTMQSLKGRLENLEQQSLRLPSSNVSAGGVSALTPLPPELRQLL
RERLGALETQLLRKVAELEEEKSQLYNETAAHRQRTESALNALMERITELEKSNNAFKSP
EDFKVSFPLRTNYLYGRIKKSLPEMYAFTVCMWLKSSASPGIGTPFSYGVPGQANEIVLI
EWGNNPIELLVNDKVAQLPLSVSDGRWHHICITWTTRDGFWEAYQDGERLGTGDNLAPWH
PIKPGGVIILGQEQDIVGGRFDATQAFVGELSQFNMWDRVLRPVDIIGLANCSAYMPGNV
VPWVDANVEVFGGASKAALEICEDRAFNS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgctggctttacttgttggacttttgtacctggtcagtgggcgctcggtgcgaagtcag
gacgccacaggtagccgcttcgtttgcaacgccatcccgccgggcgcagagcccggctgc
gggtacggagcctcggtgaaccgcgttcagagcagcagccctgtggaggatgagctgcgt
aacacgatcatccagctccgcgaaactatccttcagcagaaggagacgatcgtgagccaa
caaggaaccatcaaggagctcaactccaagctggcgcgctgcgaggcggcagccgacgaa
atggcgcagggcaagtcccggggtcagggctccaggcgcaaggagtacgggaagaacact
atgggcgacctgccccgagaccccagcgagacaatagaccaactgggcaaaacaatgcaa
agcctgaagggtcgcctggagaacttggagcagcagagtttgcgcctccccagctctaat
gtgtcagctggaggagtctcggccctcactcctctgccaccggagcttcgccaactgctg
cgggaacgtctgggggcgctggagacccagctcctccggaaggtggcagagctggaggaa
gagaagagccagctctacaatgaaacagcagcccaccgccaacgcacggagagtgctctg
aatgccctcatggagaggatcacagagctggagaaaagtaataatgcctttaaatcacca
gaggacttcaaggtgtccttccctcttcgcaccaactatctgtacggacgtatcaagaag
agccttccagagatgtacgccttcactgtgtgcatgtggctcaagtccagtgccagtcct
ggcatagggaccccattctcttacggcgtgccgggccaggccaacgagatagtcctcatc
gaatgggggaacaaccccatcgaactactagtcaatgacaaggttgcccagctccctctg
tcagtgagtgacgggcgctggcaccacatctgcatcacctggacaaccagagacggcttc
tgggaggcttaccaagatggcgagcgtcttggcacaggagacaacctggccccttggcac
ccaattaaacctggaggggtgatcatcctgggtcaggagcaggacatcgttggaggtcgt
ttcgatgccacccaagcttttgtgggagagctgagccagttcaacatgtgggacagagta
ctgcggcccgtggacatcatcggcctcgccaactgctcggcctacatgcccggaaatgtg
gtcccttgggttgacgctaatgtggaagtgttcggcggcgcaagtaaggctgctctggaa
atctgcgaagaccgcgcttttaattcttaa
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