Oryzias latipes (Japanese medaka): 101164914
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Entry
101164914 CDS
T02443
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101164914 (supt6h)
03036 Chromosome and associated proteins [BR:
ola03036
]
101164914 (supt6h)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
101164914 (supt6h)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
101164914 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
S1_RRP5
HHH_3
HHH_9
SH2
Tex_YqgF
Tex_N
DUF7798
Motif
Other DBs
NCBI-GeneID:
101164914
NCBI-ProteinID:
XP_023817960
UniProt:
A0A3B3H5V2
LinkDB
All DBs
Position
14:8915234..8932370
Genome browser
AA seq
1747 aa
AA seq
DB search
MSDFIDSEAEESEEELEEKDLKPKKTQRFLEEDDEEEDVDNPEEQDEHGNLRGLIDDGDD
DGEEEEEAPKSGSGGGSDSEEEVRHRRKKRNYDDYLDDDDLDLIEENLGVKVKRRKKKYD
RVKTLDEDEDDDEKDLIADEIFHGDGDGDLEEGEALDEPLQTVDDEEEGEEEDSDIDDFI
VDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADIGVDEGGEEEEEDPEEEGWDR
PKKQTKRRLGRKSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVKPAEDDELE
EEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQFEVPF
IAFYRKEYVEPELNINDLWKVWQWDEKWTQLRTRKQNLTRLFQKMQSYQFEQISADPDKP
LADGVRPLDTADMERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNAAKSTKKRLKKIREV
TEDGEEEELEIEEEEEQKAPDLKQASRRDMYSICQSVGLDGLAKKFGLTPEQFGENLRDS
YQRHETEQFPAEPLELAKDYVCSQFSTPENVLVGTRYMVAMQIAREPLVRHVLRQTFQER
AKINIKPTKKGKKEVDEAHFAYSFKYLKNKPVKELNGDQFLKMCLAEEEGLLTIDICIDL
IGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALNQFLYPQMAKELKSKL
IAEAKENIVRSCCRRLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAYAPSRDTP
VFCALINGEGEVVDFLRLPYFMKRRNAFREDEREKKANDIENLKKFLSSKKPHVVAVAGE
NRDAQMIMEDIKRTISELEQESSLSPVGVELVDNELATLYMNSKKSENDFRDYPPLLRQA
VSIARKIQDPLLEYAQVCSTDEDILCLKLHPLQEHVVKEDLLSALYCEFINRVNEVGVDV
NRAIAHPHTQSLVQYVCGLGSRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCAG
FIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEIL
ENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVLYRVPNTEEVFNML
TKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDATGLWQCPFCQQDNFPELSEVW
NHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKIDIE
KFSVDLTCRTSDLMDKNNEWKLPKDTYYDFDTEAEDQKHDEELKKKQQRTPYIKRVIAHP
NFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENAFS
LGHTLWINNEEFEDLDEIIARYIQPMASFARDLLGHKYFQDCNGGSREKMEEALIKTKRE
KPTFIPYFISACKDLPGKFILGYQPRGKPRIEYVTITPDGFRYRSQIFPTVNGLFRWFKD
HYQEPVPGVTPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFSAIAAVTGQ
GQNPNTTPAQWGSSQYGYGGSTGGGGSSSAYHVFATPQQPIATPMMTPSYSYTTPSQQAL
GTPQYPGSTPQSSHAHHQHLPHHSHAPHSSHHGHSSGTPSSSTSSRGRTPQQQQQQPQPQ
PKPSSSGSNSSAVDWGKMAEQWLKEKEAEGRKKATRMTPRPSPSPMIESTPMSITGDATP
LLDEMDR
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattttattgatagcgaagcagaggaatcagaggaggaactcgaagagaaagat
cttaagccgaagaagactcagagatttctggaagaagatgatgaggaggaagatgttgac
aaccctgaggaacaggatgagcatgggaacttgcgtggtctaattgatgatggagatgat
gatggggaagaggaggaagaagcaccgaaaagtggaagtggaggggggagtgactcagag
gaagaagtgagacatcgccgtaaaaagcgcaattatgatgactacctggatgatgatgat
ctcgacctcattgaggaaaatttaggcgtcaaagtgaaaaggaggaagaagaaatatgac
cgcgtcaaaacacttgacgaggatgaagatgacgatgagaaggacctgatcgcagatgag
atttttcatggagatggtgatggtgatctggaggaaggcgaggctttggacgagcccctc
cagactgtagatgatgaggaggaaggagaagaggaggactcagatatagatgattttatt
gtggatgatgatggccagcccatcacaaaaaaacggggcaagaagttctctggatacaca
gatgcagccctccaagaagcccaggaaatctttggtggcgactttgactttgctgacatt
ggtgttgatgaaggaggtgaggaagaagaggaagatccagaagaagagggctgggaccga
cctaagaaacagactaaaaggagattgggaagaaagagcatctttgaaatctatgagccc
agtgaactggaaagcagtcacatgactgatcaggacaatgagattcgatccacagacatg
cctgagaggttccagttacgatccattcctgttaagcccgctgaggatgatgagctggaa
gaagaagccgagtggatcttcagacatggtttctccactctcaccatctccatgcaggaa
agcacagactaccttgacagagggacaaccacaaatttcagcagaaagggtccaagtaca
attgccaagattaaggaggctcttaacttcatgaggaatcaacaatttgaggtccccttt
atagctttctacagaaaagaatatgttgaaccagagctaaatatcaatgacctgtggaag
gtgtggcaatgggatgagaagtggactcagctgagaacccgaaagcagaacctgacccgg
ctgttccaaaagatgcagtcatatcagtttgagcagatctctgctgaccctgacaagccc
ctggctgatggcgttcgtcctttagacacggctgacatggagaggctaaaagatgtacag
actcttgaagaactgggagatgtgtacaatcacttcctgctctattacggtcgagacatc
cccaagatgcaaaacgctgctaaatccaccaagaagaggctcaagaagatcagagaagtg
acagaagatggggaagaggaggagcttgaaattgaagaagaggaggaacagaaagcccct
gacctcaagcaggcatctcgtagggacatgtacagcatttgccaaagtgttggacttgac
ggcttggctaaaaagtttggtttgaccccggagcagtttggagagaatttaagagacagt
taccagcgtcacgagacagagcagttccctgctgagcctttagaactggcaaaagattat
gtgtgcagtcagttctccacccccgagaatgtgctggtaggaactagatatatggttgcc
atgcaaattgctcgggaacctctagtcaggcatgttcttcgccagacctttcaggagaga
gccaagattaacatcaaacccacaaagaagggtaaaaaggaggtagatgaggctcacttt
gcttactccttcaagtatctgaaaaacaagcccgtaaaggagctgaatggggaccagttc
ttgaaaatgtgtctggctgaggaagaaggacttcttactatagatatctgcatagacctc
attggcgttaaagggtatgctggggaccagacatactttgatgaaatcaagcagttctac
taccgggacgagttcagtcatcaggtccaagagtggaacagacaacgaaccttagctata
gagagggccctcaatcagttcctctaccctcagatggccaaggagctcaagagcaaactg
attgccgaggccaaagagaacatagtcaggtcctgctgtcgtcggctctataactggctg
aaggtggctccttacagaccagatcagcaggtggaggaggatgatgacctgatggatgag
agccaggggaagggcattcgggtgttgggtgtggcttatgctccaagcagagatacacca
gttttttgtgctctgataaatggagaaggagaagtggtggacttccttcgacttccttac
tttatgaagagaagaaatgctttcagggaggatgaaagagagaaaaaggccaatgacatt
gaaaatcttaagaagttcttgtcgagtaaaaagcctcatgttgtagctgtcgcgggggaa
aatcgagatgcccaaatgatcatggaagacataaagagaaccatcagtgagcttgagcag
gagtcctctctttctcctgtgggagtggagcttgtggacaatgaattggccacattgtac
atgaacagtaagaaatctgagaatgatttcagggattacccgcccttgctgagacaggcg
gtgtcaatagccaggaagatccaggatccattgctggagtacgctcaagtctgcagcaca
gatgaggacatcctctgcctaaagctgcacccactacaggaacatgtggtgaaggaggat
ttgctctccgctctttactgtgagttcatcaaccgtgtgaatgaggttggagtggatgtg
aacagggccatcgcccatcctcacactcagagcctggttcagtacgtctgtggtctggga
tcaagaaagggttcccaccttcttaagattttaaagcagaacaacactcgacttgaaaac
agaacacagctcgtcacaatgtgtcacatggggccgaaagttttcatcaactgtgctggt
ttcatcaaaatcgacacggcatcacttggagacagcacggactcatacattgaggttctg
gatggttctcgtgtccaccctgagacctatgagtgggctcgcaagatggctgtagacgcc
ctcgagtatgatgagtctgcagaagacgcaaatccagccggggctttggaggagatctta
gagaatccagaacgtctcaaagatctggacctggacgcctttgcagaagagcttgagaga
cagggttacggcaacaagggaattactctgtatgacatccgtgcagagctgagctgcagg
tacaaagacctcagagttctttacagagtgccgaacactgaggaggtcttcaacatgctg
accaaggagactcctgagaccttttatattggaaagctgatcaccagcattgtgacgggt
attgctcacagacggcctcaaggagagagttatgaccaggccattcgtaacgatgccaca
ggtctgtggcagtgtccgttctgccagcaggacaattttcccgagctgagcgaggtgtgg
aatcactttgacagcggctcgtgtcctggacaagctattggggtgcggagcagattagac
aatggtgtccaaggcttcattcccacaaagttcctcagtgacaaagtggtcaaacaccca
gaagaaagagtgaaggtgggcatgaccgtccactgccgcataatgaaaatcgacattgag
aagttcagcgtggatctcacgtgccgcacctcagacctgatggacaagaacaacgagtgg
aagcttcctaaagacacctactacgattttgacacagaagctgaggaccagaagcatgac
gaggagctcaaaaagaaacagcaaagaacaccatatataaagcgtgtgatcgcccatccc
aacttccacaacatcagtttcaaccaggctgagaagatgatggagactctggaccaggga
gacttgatcatccggccgagtagcaaaggggagaaccacctgacagtcacctggaaagtg
gccgatggaatctatcagcacgtggatgtgagagaagaaggcaaagaaaatgcatttagt
ttaggacacaccctctggatcaacaatgaagaatttgaagatctggatgaaataattgct
cgctacattcagccgatggcctcttttgcacgagatctgctcggacacaagtacttccag
gattgtaacgggggaagtagagagaaaatggaagaggcgttaatcaagacaaagagggag
aagcctacctttattccatactttatttctgcgtgtaaagatctacctggaaaattcatt
ttaggctaccaaccccgtggaaaacctcggattgagtatgtgaccatcaccccggatggt
ttcagatatcgctctcagatatttcctactgtaaacggacttttccgttggtttaaggac
cattaccaagagcctgtgccaggcgtcactcccagcaatagcagtcggacaagaacacct
gcgtctctgaacgccaccccggctaatatcaacattgcagacttaacacgagccgtcaac
gcacttccaagaaacatgacctcacaaatgttcagcgccatcgctgcagtcacaggccag
ggccaaaaccccaacaccaccccggcacagtggggctccagccagtatggatatggtggg
agcacaggagggggaggcagctcctctgcttaccatgtgttcgctacacctcagcagccc
atagccacacccatgatgacccccagctactcctacaccacgcccagccagcaggccctg
ggcaccccacagtaccccggctccacccctcagtcttctcacgcacaccaccaacacctc
ccacatcacagccacgctcctcacagcagccatcacggccactcttcaggaacgccgtca
tcctccacgtcatccagaggacgcacgccgcaacagcagcagcagcagccgcaaccacag
ccaaagccgagcagcagcggcagcaactcctcagcagtggactggggaaagatggccgag
cagtggctgaaggagaaagaggccgaggggcgaaagaaagccacaaggatgaccccacga
ccgtcccccagccccatgatcgaaagcacacccatgtctattactggagatgccacgccc
ctgctggatgaaatggaccgatag
DBGET
integrated database retrieval system
