Oryzias latipes (Japanese medaka): 101165046
Help
Entry
101165046 CDS
T02443
Symbol
sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ola04990
]
101165046 (sned1)
Domain-containing proteins not elsewhere classified [BR:
ola04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
101165046 (sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_CA
EGF_2
EGF_3
cEGF
MAGP
SdrD_B
EGF_Teneurin
Ig_J
Motif
Other DBs
NCBI-GeneID:
101165046
NCBI-ProteinID:
XP_011471983
LinkDB
All DBs
Position
4:complement(2824005..2850954)
Genome browser
AA seq
1349 aa
AA seq
DB search
MVLLLQALLSCCCALLCLNTLPQVESAVPLEGFYPFGPEAGDSQTITQDDGGSGLQEISV
AFPFFGERHTGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRRAGTVFY
RESLDPSVLRRASCDVSTYFTEFPNFNATWTLICTWHRVTFFGGNSQTPVNTFQAVLITD
GELSFTIFQYNSITWTTGMHASSGGNPKGLGGIAAQAGFNAGDGKRYFNIPGSRTSDVVN
VEATTNVGYPGRWVFRIDDAQVEVGGCNNSASVCPHLRPCMNSGRCIDDCITGNPSFTCS
CLAGFTGQRCQIDVDECASNPCQNGGTCKDHTNSFSCECPAGYTGLQCETDIDECEDRPC
MNNASCTQGIGSFTCACQPGHTGVLCETDINECESGPCLNGGECMDQVAGFTCTCPSTFT
GAFCQTELMRPKVNSSETDNQAGHCLCQNGGVCVGSTGTCECPSGFTGDLCQFEVTQILC
SSRPCPDGSTCLEYGGTFVCSCQTGADFDLQDFYPDVQPQSVCDSSPCLNGGYCYERDGG
YSCECRHGYWGKHCEKVRLNTCASGPCRNGGSCKEEAGGYRCVCPYRFTGKHCEVGRPDP
CASSPCLNGGTCFHYIGKYKCECMEAFSGRHCEIGRSSSEQGCGPPPQVKHADVQFSSMT
AGSVAVYVCHSGFTSIPRTATSVCGILGKWSQTPVCEEINECLSQPCLNGGSCQNNVGSF
LCTCKDGFSGNRCQLDTNECLSEPCMNRGTCEDKPGSYLCHCRPGFRGQSCQLEQDDCES
SPCLNGGVCRAHRGSYACLCKDGFFGEQCQMLEDPCVLKPCGNRGRCWSDRKGNYNCVCK
VGLTGKDCKKDLLPPNGLHVLRVEEREVELCWDELEPSLSPISMFAVTYAPLGQSSTKTD
FLDHRQFTHVMQGLQPGMLYNISAVSLKFKTNSNDTSQPATALIRTRPPPVEQLQVVNVS
SSQVWLSWLVQAAHHAAVNRVHVSLSPLDGSEARTAVLNISTTQYTFRSLGPGQMYTVDV
LTQSGIRPDEFPSTSHSAGPLQFWTRPLAPQNLSLSHVTPNSAVITWSRPSRDIPDGFVI
NVTRGLNTRSRFLPNGKLGSYTIRELNPGQNYYVALSAVKNTGQEQIPSAPQHIAFTTLP
VQVRPSKREKPSVTGQRTPSERPGTSSQTPGLGGPAGTDNSDDSFRFTELVDRRGKITAK
FTHLPQKTLRHRTKPDPPIRLEKMEETTNRISLALEIQEESLRTKPDSPQDCRRLSCLNG
GTCVNGGGAFICSCTPGFKGRHCELSCQRMPHPCTRLYSETRSVPVWEGGVCHYLYKRIY
KVQQDVCYREICEQIFPSKSRTRRTINQQ
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgctgctgcaagccctgctgtcctgctgctgcgcactgctctgcctgaacacg
ctgccccaagtggaatctgccgtgcccctggagggcttctacccctttggcccagaggcg
ggggactcgcagaccatcactcaggacgatggcggctccgggctccaggagatctctgtg
gctttccctttctttggagagaggcacacggggctgtatgtgaacaacaacggccttgtg
tctttcctgagggaggtgtctcagttcacacctgtggcctttccaattgcgggggatcgg
agggtcgtggcgccgttctgggctgacgtggacaaccgcagagctgggacggtcttctac
cgggagagcctggacccctcagtcctgagaagggcctcctgcgatgtcagcacctacttt
accgagtttcccaactttaatgcaacatggaccctcatctgtacttggcatcgagtgact
ttctttggaggaaactcccaaacaccggttaatacttttcaagcggtgctcatcacagat
ggggagctttctttcaccatcttccagtacaacagcatcacctggacgacaggcatgcat
gccagcagtggggggaacccgaagggcctgggggggattgcggcgcaggcaggtttcaat
gctggtgatggtaagcgttatttcaacattccaggttctcgcaccagtgatgtcgtgaac
gtggaggccacaaccaacgtgggatacccaggcagatgggtcttccgcatagatgatgca
caggtggaggtgggaggctgcaataactctgcatcagtgtgcccacacctgcggccgtgc
atgaacagcggccgctgcattgatgactgcatcacaggtaacccctccttcacctgctcc
tgcttggccggcttcacaggtcaacgatgccagatcgatgttgatgagtgtgcctccaat
ccgtgccagaacggagggacttgtaaagatcacaccaacagtttctcctgtgagtgccct
gctggatacacagggctccaatgtgaaacagacatcgatgagtgtgaagacaggccgtgc
atgaacaacgcctcatgcacacagggcattggttccttcacctgtgcatgccagccaggc
cacaccggtgtcctgtgtgagacagacataaatgaatgtgagtccgggccctgtctgaac
ggaggagagtgcatggatcaggtggctggcttcacctgtacgtgtccttccaccttcact
ggagcgttctgtcaaacagagttgatgaggccgaaagtcaattcttctgagacagacaac
caagcaggccattgcctctgccagaatgggggtgtctgtgtgggcagcacaggaacctgc
gaatgcccttcaggtttcactggagatctctgtcagttcgaagtcactcagatactgtgc
agcagcagaccctgtcctgacgggagtacgtgtttggagtacggcgggaccttcgtgtgc
tcgtgccagactggagcagacttcgatcttcaggacttctacccagatgtacagccccag
tcggtctgtgactcttctccctgtctgaatggggggtactgctatgaacgggacgggggc
tactcctgcgagtgcagacatggatactgggggaagcactgcgaaaaagttagactgaat
acttgtgcttctggtccctgccgcaatggaggctcctgtaaagaggaggcggggggctac
agatgtgtgtgtccttacagattcactggaaaacactgtgaagtgggaaggcctgacccc
tgtgcctccagtccctgtctgaacggtgggacctgcttccactacataggaaaatataag
tgtgaatgcatggaagccttcagcggcaggcactgtgaaataggcaggagctcatcagag
cagggctgtgggccgcctccacaagtcaagcatgctgacgtccagttttcctccatgaca
gccggctcagtggctgtgtacgtctgccactcaggcttcacatctattcctaggactgcc
acgagcgtctgcggcattctgggaaaatggagccagactcctgtctgtgaagagatcaac
gagtgcctatcacagccgtgcctcaacggcggaagctgtcaaaataacgtcggatccttt
ctttgcacgtgtaaggatggcttcagcggaaaccgctgccagttagacacaaacgaatgc
ctgtcagagccctgcatgaacagggggacatgtgaggacaagccaggctcctatctgtgt
cactgcaggccaggcttcaggggccagagctgtcaactagagcaggacgactgtgagtcc
agcccgtgtctgaacggaggtgtgtgtcgagctcacagagggagttacgcgtgtttgtgt
aaagacggtttctttggagagcagtgccaaatgttggaagacccttgtgtactgaaacct
tgtggaaaccgtggccgttgctggagtgacaggaaaggcaactacaactgtgtctgcaaa
gtcggcctcactggcaaagactgcaagaaagacctgctgcccccgaatggtctccatgtg
ctgcgtgtggaggagcgagaggtggagctgtgctgggatgagctggagccctccctcagc
cccatcagcatgtttgctgtgacctacgctccactgggtcagagcagcactaaaacagac
ttcctggaccatcgtcagtttacccacgttatgcaaggccttcagcctgggatgctctac
aacatctctgccgtctccctcaaattcaaaactaacagcaatgacaccagccagcctgct
actgctctcattcgcaccagaccaccaccagtggagcagctgcaggtggttaatgtgtcg
tcctctcaggtttggctgagctggctcgttcaagctgcccatcatgcagcagtcaaccgg
gtccacgtgtctctgtcgccactagatggaagtgaggctcgcactgctgtgctcaacata
agcaccactcaatacaccttcaggtctttagggcccggtcagatgtacacggtggacgtg
ctaactcaaagtggaatcagaccagacgagtttccctccaccagccactcagctggaccg
ctgcagttctggacaaggccacttgctccacagaacctctccttatcccatgtgacccct
aactcagcggtgatcacctggagtcgcccctcgagagacatcccggatggctttgtgatc
aacgtaaccagagggctgaacaccaggagccgcttcctgccaaacggaaaattgggatcc
tatacgatccgtgaactgaatccaggacaaaactactacgtggctctcagtgcggtcaaa
aacacagggcaagagcagattcccagcgcgccgcagcacatagccttcactacattacct
gtgcaggtcagaccgtcaaagagggagaagccatcagtgaccggtcagcggaccccaagt
gaacgcccaggtacttcatcccagacgccaggcctgggaggtccggcaggaacagacaac
tcagacgactcctttagattcacagaactggttgacagaagaggaaaaataacagcaaag
ttcactcacctgcctcaaaaaacccttcgacatcgaaccaaaccagatccaccaatcaga
ttagagaagatggaagaaacaacaaatagaatcagccttgcattagagattcaagaggag
agcttgagaacaaagcctgactcgcctcaggactgccgccgtctgtcctgcctcaacgga
ggtacatgtgttaacggaggcggcgccttcatctgcagctgcacgccagggttcaaaggc
aggcactgtgaactgtcatgccagcggatgccacatccctgcacccgtctctactcggag
accaggagtgtgcccgtgtgggaggggggagtgtgccactacctgtataaaagaatatac
aaagtacagcaggatgtgtgttatagagaaatctgtgaacagatatttcccagcaaaagt
cggaccagaagaacaattaaccaacaataa
DBGET
integrated database retrieval system
