Oryzias latipes (Japanese medaka): 101165053
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Entry
101165053 CDS
T02443
Symbol
rfx4
Name
(RefSeq) transcription factor RFX4 isoform X1
KO
K09174
regulatory factor X 4
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101165053 (rfx4)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Other basic domains
RF-X
101165053 (rfx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
101165053
NCBI-ProteinID:
XP_004069758
UniProt:
H2M652
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All DBs
Position
6:21498367..21515432
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AA seq
733 aa
AA seq
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MHCGLLEEPDMDSTESWIERCLNESESKRYSSHTSLGNLSTDEHEEKENNRASKPHSTPA
TLEWLEENYEIAEGVCIPRSALYMHYLDFSEKHDTQPVNAASFGKIIRQQFPALTTRRLG
TRGQSKYHYYGIAVKESSPYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPE
FPNVKDLNLPASLPEERVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSPTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKIALHD
LPENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVINSADITFQMLEDWRNVDLNSITK
QTLYTMEDSQEEHRRIIIQLYQEFDRLLEEQSPIEAYIEWLDSMVDRCVVKVAGKRPGCL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANDL
MRAMKGEGVTAEPEEEFTLSETTPTSPSPGSYSPARSVNSVSVSSVGSPTAAVSPEFTGV
SASTGAVQSYTWSLTYTVTTAGGSTPEAGQQLSCMRSSAPAPPPSSTHRMPVYPHREEHG
YPGSYNYSSYSNQHPHSIQGQYPSLAHEAAIPAPLHYSTYHRSSAQYQQMSRMEPCLMGS
TPRLHPSPVAPRWPDVSPANSCYTSPPLHSSRYAPSGDMYSPLGPRRNSEYEHSQHFPGF
AYINGEATTGWAK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgggctgctggaggagcctgacatggattccacagagagctggattgaaagg
tgccttaatgaaagtgagagcaagcgatattccagccacacgtctctggggaacttgtcc
accgacgaacatgaagaaaaggaaaacaacagagcctcaaaaccacattcaactccagct
actctggaatggttagaagagaactacgagattgctgaaggtgtatgcatccccagaagt
gccctctacatgcattacctggacttcagtgagaagcacgacacgcagccggtgaacgca
gcaagctttggaaagattataaggcaacagtttccagcactaaccaccagaagattggga
accaggggccagtcaaagtatcactactatggcatcgcagtgaaggagtcgtctccgtac
tacgacgtgatgtactccaagaaaggagcggcgtgggtgaacgagacggggaagaaagag
gtcacgaagcagacagtggcgtattcaccgcgctccaaactggggacgctcctgccagag
ttcccaaatgtcaaagacctaaatttgcctgccagcctgccagaggagagggtgtcgacc
ttcatcatgatgtacagaacacactgtcagaggatactggacactgttatccgagccaac
tttgacgaggttcaaagcttcctgctgcacttctggcagggcatgcccccccacatgctg
cctgtcctcggctcccccactgtggtgaacatcgtcggcgtctgcgactccatcctctac
aaggccatttccggggttctgatgcccaccgtccttcaagcactgcctgacagtttgact
caggttatccgaaaatttgccaaacaacttgacgaatggcttaaaatagcacttcacgac
cttcccgaaaacctgagaaatatcaaatttgagttgtcccggagattctctcagatcctg
aagcggcaaacgtcgttaaaccatctatgtcaggcgtcccggactgtaataaacagtgcg
gatatcacttttcaaatgctggaggactggaggaacgtggacctgaacagcatcaccaag
cagacactttacactatggaggactctcaggaggagcacaggcggatcatcatccagctg
tatcaggagtttgaccgcttattggaggagcagtccccgatcgaggcgtacatcgagtgg
ctggattccatggtggaccgctgcgtcgtcaaggtggcaggaaagaggcccggttgcctg
aagaaggtggctcaacagttcctgctgatgtggtcgtgttttggtaccagagtcatccgg
gatatgaccctccacagcgcgcccagcttcggctccttccacctgatccatctcatgttt
gatgactatgtgctttacctgttggagtctctgcactgtcaggagagagccaacgacctg
atgagggccatgaagggcgagggggtcacagcagaaccagaggaggaattcacgctttca
gaaaccactcccacctccccgtctccagggtcatactcccctgctcgatcagtcaactcc
gtcagcgtctcctcggttggttctcccacagctgcggtgtccccggagttcaccggagtg
agcgcctccacaggtgctgtgcagtcatatacctggtcccttacatacacagtgacaaca
gctggtggttctactccggaggctggacagcagctgtcctgcatgaggagcagcgctccg
gccccccctccgtcctccacccaccggatgccggtttatccccacagagaagagcacggt
taccctggtagctacaactacagcagctacagcaatcagcatcctcactccatccagggc
cagtatcccagtctggcacacgaggcggcaatcccagccccccttcactactccacctac
caccgctcatctgcacagtaccaacagatgtctcgaatggagccctgtctgatgggcagt
actcctcgtttgcacccttcgcctgtcgccccccggtggccggatgtgtcccctgccaac
agctgttacacgagcccacctttgcattcatcccgttacgccccctctggggacatgtac
tctcccctaggccctcgcaggaactcggagtatgaacattcgcagcattttcctggcttt
gcgtacataaatggtgaagccaccacaggctgggccaaataa
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