Oryzias latipes (Japanese medaka): 101165064
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Entry
101165064 CDS
T02443
Symbol
caskin1
Name
(RefSeq) caskin-1 isoform X1
KO
K21952
CASK-interacting protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101165064 (caskin1)
Membrane trafficking [BR:
ola04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
101165064 (caskin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_5
Ank_4
Caskin1-CID
SAM_2
Ank_3
Caskin-Pro-rich
Caskin-tail
SH3_2
SAM_TNK
SH3_1
SH3_9
Ank_KRIT1
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
101165064
NCBI-ProteinID:
XP_023813532
LinkDB
All DBs
Position
8:complement(23023020..23140511)
Genome browser
AA seq
1606 aa
AA seq
DB search
MGKDQELLQAVKTEDLLTVQKLLQRPGKAKLLGSTKKVNVNFQDTDGFSPLHHAALNGNL
ELISLLLESQAAVDIRDQKGMRPLHYAAWQGKAEPMKMLLKSGSSVNGQSDEGQIPLHLS
AQHGHYDVSEMLLQHQSNPCIVDNAGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPKKG
DTTDPNGMSPLHLAAKNGHIDIIRLLIQAGIDINRQTKAGTALHEAALCGKTEVVRLLLE
SGINATVRNTYSQTALDIVYQFTATQASREIKQLLREASAALQVRALKDYCNNYDLTSLN
IKAGDVITVLEQHPDGRWKGCIHDNRTGNDRVGYFPSTLVEVISKRTGLASKVICTQQFQ
KIPLVPPATVAPANAVVNGNDTTFHQIHILPPPPPPPPHSHQPLLPLFTSFGYNRSPVTT
PQGDTPTAPGCRGSEASPHSSPTPSSGPHGGSNEEIWVLRKPVAGGDRSSVGSSGSVTSL
RSSGSGQSAGSAPHILHAQAEGVKLLATVLSQSAKAKEHLMEQSKSVDQPAASTRTASQS
GCPLHEAPPYDATATRKGEGPVEGKSSEAVVQWLSDFQLQVYAPNFLNAGYDLPTISRMT
PEDLTAIGITKPGHRKKITTEINKLSATEWLPEQKPNNLEEWLSAIGLSQYHQVLVQNGY
ENVDFITDITWEDLQEIGITKLGHQKKLMLAVKKLAELQRLTDGRGSPRKKPPPITQQQE
LMSIDSPPPEEVMSPKMSTFQDSELSPELQNAMTQPRQEVKGQRVRTLSKDYEETTAGGG
GGPPKKEARTMRQQSSQGSTTSHRGSVSSQGKHRHSHSHSQPAPPYTPPHTPTKTRTSSS
SSTSSVQSTASPQPRSRPSQELIQEERPQAPRSHPPHSPTHRGAPCQLPQQQSQFQLEQQ
PQPQHHPQAMDVRETQQAQLPLLCLPPEAELAEEEEADPSLLQKKHAHSLNRNAVSDGEC
DERPNRDEREAETPGGQGPAVVRGEGGKYATVTHRVSRSHSVRNQDKGANRNHTQTFALR
QKKKGPPPPPPKRSSSAISSSSSNLTEANTELQTLTTTGGMLDVPYHQQRRASDLGMSLE
TTAVETTSMGSVRSIAAMLEMSSIGGGAKGMALQKNFLQVGKTRDAIGLNGEVVNRRRTI
SGPVTELVEAAKREQPTNSDLLPISTLTEASPPLPSPHYTSSTQPNSGGSGSSTENLPFA
EEGSQTIRRQGREGGEGQCVFCVCLQGDGDGPQPDAGHTQEDRAESTGTLKRRPRSSKSH
PNGSDFILQESSTVKRRPKSRDKEPEGYTELSAANGQPMSTIQPKTTQPVPYQNGTVTVK
RCQPSDVPVSEPQPQNYPQQGVTTIPHRDSVDHGAPTANDGGPLRKPKPPVSPKPVVAQI
KRQSTQQTTQQAAPNKKIPLPGPGTPGSPVEGKKIPPPVSPKPAPPPTAPKPAKLIHSMT
GPSSPTTASVPVKQHAVVARQTSSPPTFPTSNTPSPPNAKPTSPSSQSPHTPQTPTTPLT
PATPSPTPPPVKPPRSSIGGVSVDSGIAGGGFMPHANTTAEFGVDSLVHQKLEETSASLA
AALQAVEDKILRQEDSVAEQKTTVSILDDIGSMFDDLADQLDAMLE
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaccaggaactgctgcaggcggtgaagaccgaggacctgctcaccgtgcag
aagctgctgcagaggcctgggaaagcaaagctcctcggttcaacaaagaaagtcaatgtc
aacttccaggatacagacgggttttctccgctgcatcatgcggctcttaacgggaacctg
gagctcatttctctgctgctggagtctcaggcagcggtggacatccgagaccagaaaggc
atgcggccgctgcactacgcggcctggcaggggaaggcggagcctatgaagatgctgctg
aagtcgggctcgtccgtcaacggccagtcggacgagggtcagatccctttgcacctgtcg
gctcagcacggccactacgatgtgtctgagatgctgctgcagcaccagtccaacccgtgc
atcgtggacaatgcagggaagacacctctggacctggcatgcgagtttggcagagtcggg
gtggtccagctgctgctgtccagtaatatgtgtgctgctttgctggagcccaaaaaagga
gacaccacagacccgaatggcatgtcgccgctacacctggctgcaaagaacggacatatt
gacatcatcagactcttgatacaggccggcatcgacatcaacaggcagactaaagcgggc
actgccctgcatgaagctgccctctgcgggaagactgaggtagtgagactcctgctggag
agtggaatcaatgctactgtgagaaacacctacagccagacggcactggacatcgtctac
cagttcactgcaacccaagctagcagggagataaagcaactcctgcgggaagcatcagca
gctttgcaggttcgggctctgaaggactattgtaacaactacgacctgaccagcctcaac
atcaaagcaggagacgtcatcacggttctggagcagcaccccgatggacgctggaagggc
tgtatccatgacaaccggacaggaaatgatcgagtcgggtacttcccgtccactctggtg
gaggtcatcagcaagcgcaccggtttggccagcaaagtcatttgcactcaacagtttcaa
aagataccgctggttcccccggcaacggttgcccctgccaacgcggttgtcaacggcaac
gacaccacgtttcatcagatccatatcctgcctccaccgcctcctcctccaccacattcc
catcagccactgcttccacttttcacttcctttggctataacaggtcgcccgtgacaact
ccacagggagacacacccactgccccaggttgtcgaggctcagaggcaagtcctcacagt
tctcccactccatccagcgggccccatggaggctccaatgaagaaatctgggttctgcgc
aagcccgtggcaggtggagaccgcagcagtgtgggaagctcgggaagtgtgaccagcttg
aggtcttcgggcagcggtcagagtgctggcagcgctccacacattctccacgcgcaggcg
gaaggcgttaagcttctggccacggtgttgtcacagtcggccaaagccaaggagcatcta
atggagcagtccaagtctgtggaccagcctgcagcctccactcggacagcgagccaatcg
ggctgtccgctacacgaagcgccgccttatgatgccacggcaaccaggaagggggagggc
ccagtcgaagggaagagctcagaggctgttgtccaatggctgagtgactttcagctgcag
gtctacgctccaaacttcctgaatgctgggtatgacttgcccaccattagccgaatgacc
ccggaggacctgacagcgatcgggatcaccaaaccgggtcacaggaagaagattacaacg
gagatcaacaaacttagtgccacagaatggctgcctgagcagaaacctaacaacctcgag
gagtggttgtccgccatcgggctcagtcagtaccaccaggtgttggttcagaatggctac
gaaaacgtcgacttcatcaccgacatcacatgggaagacctgcaggagatcggcatcacc
aaactgggccaccaaaagaagttgatgctggcagtgaagaagttggcagaactacagcgc
ttgacagatgggaggggctctccgagaaaaaagccaccgccaatcacgcaacagcaggaa
ctcatgtctattgacagcccgcccccagaggaggtgatgtctccaaagatgagcaccttc
caggacagtgaactaagccctgagctgcaaaatgccatgacgcagccacggcaggaggtg
aaaggtcagcgagttcgcaccctcagcaaagactacgaggagaccacagcaggaggaggt
ggggggccgcctaagaaggaagcacggactatgaggcagcagagcagccaggggagcacc
acctcccacagaggcagcgtgtcctcccaagggaaacaccgtcactcccattcccactcc
cagccggcaccaccctacacaccacctcatacgccaaccaagaccaggacttcctcttcc
tcatccacctcctctgttcagagcaccgcttccccacagcccagatccaggccgtctcaa
gagttgatccaggaggagcgccctcaggcgccacgctcacaccccccacattctccaacc
catcgcggagcaccctgtcagctcccccaacagcaatctcaattccagttggagcagcag
ccacaacctcagcaccacccacaggcaatggatgttagggagacccagcaggctcagctc
ccacttctctgtttaccaccagaggctgaactggcagaagaagaggaagcagatccctcg
cttctccagaagaaacatgcacacagcctcaacagaaatgccgtctcagacggggagtgt
gatgagaggccaaacagagacgagagggaagcagaaacacctggaggtcagggtccggcc
gttgtaagaggggaagggggcaaatatgcaacggtgactcaccgcgtgagccgaagccac
tctgttcgcaaccaggacaagggagccaaccgcaaccacacgcagacctttgccctgcgc
cagaagaaaaaaggtcccccaccaccaccacccaaacgttccagctccgccatctccagc
tccagttccaacctgacagaagccaacacagagctgcagacactgaccaccaccggtggg
atgttggacgtgccttaccaccagcagcgcagggccagcgacctggggatgtctttggag
accacagcagtggagaccaccagcatgggtagtgtaaggagcatagctgccatgctagag
atgtcctccatagggggtggagctaaaggcatggctcttcaaaagaacttcctgcaggtg
ggaaaaacccgcgatgccattggtctgaatggagaggtggtgaatcgaaggcggaccatc
agtggcccagtaactgagctagtcgaggccgcaaagcgtgaacagccaaccaactcagac
ttactccccatctccaccctaacggaagcctcccctcccctgccgtcacctcactatacg
tcatcaacgcaacccaattcaggaggcagcggcagttcaacagaaaacctaccatttgct
gaagagggaagtcaaacgattcgccgccaggggcgagaaggaggagaaggacagtgtgta
ttttgtgtttgcctgcagggtgacggcgatggcccccagccggacgccggacacacccag
gaggacagagcggaatcaacgggtaccctcaaacgaaggccgcgcagctccaagtcccac
cccaacggctcggacttcatccttcaagagtcatccaccgtcaaacgacgacccaaaagt
cgagacaaagaaccagagggctacacagaactgtctgcagccaatggacagcccatgagc
accatccagcctaaaactacccaaccagttccctatcaaaacggcacagtcacagtgaaa
cgttgccaaccatctgacgtcccagtgtcagagccacaaccccagaattatccacagcaa
ggagtgaccactatccctcacagagacagcgtggaccatggagctccaactgcaaatgac
ggaggtcctttgagaaagccaaagcctccggtctccccaaagcctgttgttgcacagata
aagagacaaagcacccaacagaccacccaacaggccgcgcccaacaagaagatcccactg
ccaggccctggaacgcctggaagtccagtggaaggaaagaagattcctccacctgtctcg
cccaaaccagcgcccccgcccacagctcccaaaccagccaagctcatccactccatgacc
ggcccctcatccccgaccacggcttctgttcctgtcaagcagcatgctgtagtggcacga
cagaccagttcgccccccacattcccaacatccaacactcccagccccccaaacgccaag
ccaacgagtccttcttcccagagcccccacacaccccaaacccccacaacgccacttact
cctgccactcccagcccaacccctcctcctgtcaagccgccccgctcctccattgggggg
gtgtcagtggacagtgggatagctgggggcggcttcatgcctcacgccaacaccaccgca
gagtttggcgtggattctttggtgcatcagaagctggaggagacgagcgcatccctggct
gccgctctgcaggcggtggaggacaagatcctgcgacaggaggactccgtggcggagcag
aaaaccacggtgagcatcctggacgacatcggcagcatgttcgacgacctggccgatcag
ctggacgccatgttggagtag
DBGET
integrated database retrieval system
