Oryzias latipes (Japanese medaka): 101165263
Help
Entry
101165263 CDS
T02443
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ola04054
]
101165263 (nlrc3)
Pattern recognition receptors [BR:
ola04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
101165263 (nlrc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
AAA_33
AAA_16
LRR_12
Motif
Other DBs
NCBI-GeneID:
101165263
NCBI-ProteinID:
XP_004080575
LinkDB
All DBs
Position
19:9131263..9141949
Genome browser
AA seq
1133 aa
AA seq
DB search
MERKHYDSILDRSKRITWQNDCYIDLQSTSSSASLQTRSEDLGWVLKHQNQLRSFLTKPF
LEEILTHLKKVDVLTLAEETTIKEAGQLKDQVTVLTTVITSKESQGSDALQGFIMSSNAP
VSQLILNYDSTVRRHKDVLLQQYEHYRERDSVSCSKLNICSRTLLLIDGLSDLQQKEHDL
MQVGVTRGRKVNHLRQLGLGKLFEPLTRVSLPPRVSLTVGVSGIGKTTWVRHFIRQWSQG
AVCSDFHFVLPFTFSELNTLEKLSAEKLVKMAFPYLADPSLVLTSPCRTLLIFDGLDEFR
CRLNFSDAIPCNDPKKEVSIDDLITNIIRGNLLPDVAVWVTSRPGVASLIPGGLVDRVSE
IPGFSPDDIQTFLNHHFSERDFASKIWAHLQAHSILMVMCYIPCICWITADTLLYILQSG
AQESLPRTCTGLYAHFCYMKAELGEPRGREPIKTEQFHGSNRKLLGNLGRLAFYGLLKHK
YTFSEQDLKAYGIDLQLTQSSLGAGVLIRLESTIHTTYRFTHLTLQEFLAATFYHVSSKR
AIFDLFSESTMSWPKIGFQTHFRSAFQHSQQAEDGHLDVFVRFLTGLLCPTALKPVAGLL
AAGKDDGNQKVWAAGFLQGLLSSGEAVVSLRIVNLAYCLHELQHTELLRSVEDDLRQESL
AGKLTRPHCVVLGFLLHVSPECSDQTNLTGSLNYSTVKSLLPQLLYCSHLRLENNNFKDD
VMELLGSLLSAKDCHIQKLSLADNAISNKGAKALSRALLVNRTLTYLNLRNNNIGSKGAK
FLAEALKMNQVLTSINFQNNSIEEEGAQALAEVLQCNRKLVSLNVRKNKIGADGAKRIAD
ALKMNQTLTKLILCSNQLGDKGTVALAEALKLNQTLLSLQLQSNSISNRGMTALTKALRF
NHGLVTLNLRENSIGIEGAKNMAQALKENNSLQNLDLTANLLHDEGVQAISAAIKFNQGL
TSLHLQWNFIKSTATKVLANALMSNATIKLLDLQENAIGNEGVIFLAEALKVNTSLQTLC
LQGVSAGTSGAVALAEALMENQSLQTLDLRGNSIGMEGAKALANALKCNRSLKSLNLQEN
SLGMDGAIFIATALKGNHQLAYINLQGNGIGESGAKVISDAIRATALSCVVDI
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaaacattatgattcgatcctggaccgaagcaagcgaattacctggcaaaac
gactgctacattgacctgcagtccacgagctcctctgcctctttacaaacaagatcagag
gatctgggctgggtcctaaaacaccaaaaccagctacgaagctttcttaccaaacccttt
ctggaggaaatcttgacccacctgaaaaaggtggatgtgctcactttagccgaagagacc
accatcaaggaagcaggccagttaaaggaccaggttactgtgctcactactgttattaca
agcaaggaaagccaaggatctgatgcacttcaaggctttataatgagctccaatgctccg
gtttcccagctcatcttaaactatgattcaacggtgaggagacacaaggatgttttgttg
caacagtacgaacattacagagaaagagattcagtcagctgctccaaactgaacatatgt
tcaagaactctgctgctgattgatggactttctgacctccaacaaaaggaacatgacctg
atgcaggtgggagtgactcgaggaaggaaagtcaatcatctcagacagttagggttggga
aaactgtttgagcccctgacaagggtcagcttgcctcccagagtctccctcacagttggg
gtgagcggcattggcaagacaacatgggtacgacacttcatcagacagtggagccaaggt
gctgtttgctccgatttccactttgtcttaccttttacattcagtgagctgaacacactg
gaaaagctgtctgctgagaaacttgtcaaaatggcttttccttatttagcagatccaagt
ttggttctcacaagcccctgtcggactctcctcatctttgatggtttggatgaattccga
tgcaggttaaatttctctgatgccattccctgcaatgacccaaagaaagaagtgtccatt
gatgacttgataaccaacatcattcgagggaatctgctcccagatgtagcagtgtgggta
acgtccagaccaggagtggcttcactcatccccggaggcctggttgacagagtgtctgag
attccaggattcagtcccgacgacatccaaaccttccttaaccaccacttctcagaaagg
gactttgccagcaaaatatgggcccacctacaggctcacagtatcttgatggtgatgtgc
tacataccatgcatttgctggataacagctgatactttgttgtacatcttgcagagtgga
gcacaggagagccttcccaggacttgcactggcttatatgcccatttttgctacatgaaa
gcagaattaggagagccaagaggcagggaacccattaaaacagagcaatttcatgggagt
aaccgaaaactactggggaaccttgggcggctggcattttatggactcttaaagcacaaa
tacaccttcagcgagcaagacctcaaggcttatgggatagatttacagttaactcaaagc
agtcttggtgctggagtcctcattcgattggagtccaccatccacacaacatatcgattc
acacatttgactctgcaggagtttcttgcagctacattctaccacgtttcctccaagaga
gccattttcgatctgttctcagaaagcaccatgtcctggccaaaaattggctttcagacc
catttccgaagtgcctttcagcactcacaacaggctgaagatggtcacttggatgttttt
gtgcgattcttgacaggcctgctctgcccaacagcactgaagcctgtcgcagggctttta
gcggcaggaaaagatgatggtaaccagaaggtgtgggcagctgggtttttgcaaggcctc
ctgtccagcggggaagctgtggtttcactgcgcattgtcaacttggcttattgcttacat
gagctacaacacaccgagctgctgcggagtgtcgaggacgatttacggcaagaaagcttg
gctggaaagttaactcgacctcactgtgttgtcctgggcttcctgctgcatgtgtctcca
gagtgcagcgaccagaccaacctaactggctctctaaactactcaacagtgaaaagcttg
ctcccacaactgctttactgcagccacctcaggttagagaataataacttcaaagatgat
gtcatggaactgctgggaagcctccttagtgcaaaggattgtcatatccaaaaattaagt
ttggcagacaatgctatcagcaacaagggagccaaagccctgagtcgagctcttctggtg
aatcgtacattaacatatctcaatctccggaacaacaacattgggtctaaaggtgcaaag
ttcttggcagaggctctgaaaatgaatcaagtcctgacatcaattaacttccagaacaac
agtatcgaggaggagggcgctcaggccctggcagaggttctgcagtgcaatcgcaagctg
gtgtctctgaatgtgcggaaaaataaaattggggcagatggagccaaaaggattgcagac
gcactgaagatgaaccaaactctaacaaagctaatactttgcagtaaccagctgggggac
aaaggaaccgtcgctctggccgaagcgttaaaactcaaccaaactcttctctcactccaa
cttcaaagcaactcaatcagcaacagaggaatgactgcactgaccaaagccctcaggttc
aaccacggtctagtaaccttgaatctcagagagaactcaattgggattgaaggagcaaag
aacatggcccaggcgctcaaggagaacaactctctgcaaaatctggatctcacggccaat
ttattacatgatgaaggtgttcaggcgatatctgcagcaatcaaatttaatcaaggactc
acctctctgcatctccagtggaatttcatcaagtccacagccactaaagttttggccaac
gcacttatgtccaatgccacaataaagctgttagatctgcaggaaaatgcaatcggaaat
gagggtgtcatttttcttgcagaagctctgaaagtcaacacttcactgcagacgttatgt
cttcagggagtatcggctgggaccagtggagccgtggcactggcagaagctctgatggag
aatcaatctctgcagacattagatctccgtggaaacagtatagggatggagggagctaag
gccctggccaatgctctgaaatgtaacagaagtctgaagtccttgaatctgcaggagaac
tctttaggcatggacggagccatattcattgcaacagctttgaagggaaaccaccaattg
gcgtatatcaacttgcagggtaacggcattggagaatcgggagcaaaagtcatctctgat
gcaataagagcaactgcactgagctgtgtggtggatatctaa
DBGET
integrated database retrieval system
