Oryzias latipes (Japanese medaka): 101165329
Help
Entry
101165329 CDS
T02443
Name
(RefSeq) calpain small subunit 1
KO
K08583
calpain, small subunit 1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ola01002
]
101165329
Peptidases and inhibitors [BR:
ola01002
]
Cysteine peptidases
Family C2: calpain family
101165329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
Gag_FV_central
Motif
Other DBs
NCBI-GeneID:
101165329
NCBI-ProteinID:
XP_004075221
UniProt:
H2L4B3
LinkDB
All DBs
Position
13:1230029..1239247
Genome browser
AA seq
216 aa
AA seq
DB search
MYLANKLIGGIVKTISNIDPSQFRPSDPPPPRRPQHLAQSNENEEEKQFRRVFQQLAGDD
MEVSPNELMDILNKVISKRKDLKTDGFSIESCKSMVAVMDSDSTGRLGFHEFKHLWNNIK
KWQGIYLSYDSDHSGMIGSDELPRAFEAAGFPLNEQLYKVIIRRYSDENGNMDFDNFIGC
LVRLDAMCRAFKTLDKDNSGAIDLDIKEWLQLTMYS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttgcaaataaactcattggtgggatcgtgaaaaccatcagcaacatcgacccg
tctcagttcaggccgtcagacccgcctccccctcgcagaccccagcacctcgcccagagc
aacgagaacgaggaggagaagcagtttcggagggtcttccagcagctcgccggagatgac
atggaggtgagccccaacgagctgatggacatcttgaacaaagtcatttccaaacgcaaa
gacctgaagactgacggattcagcatcgagtcctgcaaaagcatggtggctgtcatggac
agcgacagcacaggaagactgggcttccatgagtttaaacacctctggaacaacatcaag
aagtggcagggtatctatttatcctacgactctgaccattccggcatgatcggctcggat
gagctcccacgcgccttcgaggctgcaggctttcctctgaacgagcagctctacaaggtc
atcatccgtcgctatagtgatgagaacggaaacatggactttgacaatttcattggctgc
ctggttcgactcgatgccatgtgccgagcgtttaagactctggacaaggacaacagcggc
gccatcgacctggacatcaaagagtggcttcagctgaccatgtactcctga
DBGET
integrated database retrieval system
