Oryzias latipes (Japanese medaka): 101165382
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Entry
101165382 CDS
T02443
Symbol
dna2
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101165382 (dna2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ola03032
]
101165382 (dna2)
Enzymes [BR:
ola01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101165382 (dna2)
DNA replication proteins [BR:
ola03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
101165382 (dna2)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
101165382 (dna2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
Dna2_Rift
AAA_30
AAA_19
SRP54
UvrD-helicase
nSTAND3
CbiA
bpMoxR
DEAD
ResIII
AAA_22
MobB
AAA_25
AAA_7
RNA_pol_Rpc34
T2SSE
NPHP3_N
AAA
AAA_16
HerA_C
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
101165382
NCBI-ProteinID:
XP_011490514
LinkDB
All DBs
Position
3:24314887..24329733
Genome browser
AA seq
1370 aa
AA seq
DB search
MKRTKMKNMMPAGTPGGQQNISAFFSLKGQKFSPCSLKAYGSVCALVKTGPQNPDNKSSL
LRHNSPSKRNMLGDLENMLPSSPDLLLLVPETPNSQIRSTSSSSSREENQDPGRKVANVG
QLSPICRSPSSKGQRIKRSRNGKGESTKLGGRLSSSLKRLFSPPEDSYMAKKARIDSLQE
AAVQAPGSSQEELQPLRPFVKALSGDQPNKSPLQMSSDHVMVEQREHQEEQDRRESNFTV
ITEMKTAEVQTSRNLHRGLQNVCSPFTAGQESSANTPFPVKDPKEKETTRMQETDGDQNN
KQPTDEEHAGAADAASAHPAEDDFDDSWFMDQMEHMEDKPKKPCKLPDHVILSGGPNNRY
WVVDVEDGPGYKKLIISCSRTLHPTETCLLKDGWETTPVRRGDVVHLEGRSDAGTWLVER
DQGLLVLQPDSLISGTSISNSIRCMRRAVLGEMFKSFDGGSKQMLNGTMVHEVFQGAAKA
KDFSSEKLFKLADEALHSPRYLGDMYTLGVSQEEMKQELLDYLPSLENWASEYLSSSKPK
SIGLKILNPSRAPGGCQESNAVVTVTDLTDIEENVWSPRFGLKGKIDVTAQVQIQRPRTS
RSPEEKTFPLELKTGRESNSIEHRSQVILYTLMSMERYNPEAGLLLYLKTGSMHPVAPSH
MDRRELLKLRNTLAHHLHNSVEKGADLSNLQRLPDILTSRQTCQYCPQKLNCALYERALD
PSSADPSDDVRDFLQQECGHLAQQHLNYFSHWLLLCILEAVTMETKNSRKHIWLQSIESS
EKNGSCVGNLQLKDAVAAQAEDVFLHRFQRTGSAPSQSATNCGLTNGDRIVVSDQDGRLV
GLATGYLCEVDKTSVSCTLSRDLSKFRDVLFRLDADEGVVGMSTHLTNLSRLMENCQDSE
RLRKLIVDLRPPEFIFNLSSVLPRDAKETVAEILKGLNKPQKQAMKKVLLSKDYTLIVGM
PGTGKTTTICTLVRILQACGFSVLLTSYTHSAVDNILLKLKRFRVGFLRLGQGQKIHPDI
LPYTEENVRKKGVHTLLDLEQLYNKELVVATTCMGIKHPIFTRRRFDYCIVDEASQISQP
ICLGPLFYAHRFVLVGDHQQLPPIVQNKEARSLGMDESLFKRLEVHGEAVVQLNVQYRMN
RQIMSLSNSLMYDGRLECGSERTAAALLTLPSLASVQSELRSHSETHPQHDLSWVQFTLL
PSNPVCFLDCSLVPALESVEQGGVSNHTEAALIHMLLSLLIKAGCRPSDVGVIAPYRQQL
KTIQALLQSPTFSGVEVNTVDKYQGRDKSLIVLSFVRSNTEEGHLGELLKDWRRLNVAIT
RAKHKLLMVGSAVTLRRFPPVEKLLNHLQQENMIVQLPPAAHRSLSSMFL
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggaccaaaatgaagaacatgatgcctgcagggacgcctggagggcaacaaaac
atctcagcctttttttctttaaagggccagaagttctctccctgttccttaaaagcatac
ggctctgtctgtgcactcgtgaagaccggaccccaaaacccagataataaaagttccctg
ttgagacataactctccatcaaagagaaacatgcttggagatcttgaaaacatgcttcct
tcctcaccagaccttctgcttttggtacctgagacccccaatagtcagatcaggtctacg
tcctcttcttcctccagagaggaaaaccaggatcccggaagaaaggtggcaaacgtcggc
caactgtctcccatctgtcgcagccccagctccaaaggtcagagaataaagagatcgagg
aatggaaagggtgaatcaacaaagttaggtgggagattgtccagctctttgaagagactc
ttcagtcctcctgaggactcttacatggcaaagaaagcaagaatcgactcgctgcaagaa
gctgcagtccaggccccaggtagcagccaggaggagttgcagcctttaaggccctttgtg
aaggccctctctggtgatcaacccaacaaatcccctttgcagatgagttctgatcatgtc
atggtggaacagcgagaacatcaggaggagcaggacaggagagagtccaattttactgtg
ataacagaaatgaaaacggcagaagttcaaacgagcagaaaccttcaccgtggcctgcag
aatgtatgctctcccttcactgctgggcaggaatcttctgccaataccccattcccagtg
aaggacccaaaagaaaaagagactacaagaatgcaggagacggatggagatcaaaacaac
aagcagccaacagatgaagaacacgctggagctgcagatgcagcatctgcacatcccgca
gaggatgactttgatgacagttggtttatggatcaaatggaacacatggaggataaacct
aaaaaaccttgcaagttacccgaccacgtcatcctttctggaggtccaaacaatcgctac
tgggttgtggatgttgaggatggtccaggctacaaaaagctcatcatctcatgttccagg
acgctgcatccaactgagacgtgtctgctaaaagatggatgggagacgacgcctgtgagg
cggggcgacgtggtgcatctggagggtcgctcagatgctgggacctggttagtggaacgg
gatcagggcctcctggttttacaacctgacagtctcatttcaggaaccagcatttccaac
tccattcgttgcatgaggcgcgcagttctgggagaaatgttcaagagttttgatggtggc
tccaagcaaatgctgaatgggaccatggtccatgaagtcttccagggagctgccaaagcc
aaggatttttcttctgagaaacttttcaagctggctgatgaagccctccacagtcctcga
tacttgggagacatgtacactctgggtgtgagtcaggaggagatgaagcaggaactgctc
gattatctgccctcactggaaaactgggccagcgaatacctcagctcctcaaagccaaag
tccatcggccttaaaattctgaaccccagccgagctccgggtggctgccaggaatcaaac
gccgttgtcacggtgactgacttgacagatatagaggagaacgtgtggtctccgaggttt
ggcctcaaagggaaaattgatgtgacggctcaagttcaaatccaaaggccacgaaccagc
agaagtccagaagagaagacttttcccctggagttaaaaaccggaagggagtccaactcg
atagagcatcgcagtcaggtgattttgtacacgctgatgagcatggagagatacaaccct
gaagccggtctgctgctttatctcaagactggcagcatgcaccctgtagcacccagccac
atggaccgcagagagcttctgaagctgaggaacactttggctcatcaccttcacaacagt
gtggagaaaggggcagacctgagcaacctccaaagacttcccgacatccttacaagcaga
cagacctgccagtactgtcctcagaagctcaactgtgctttatatgagagagcactggat
cccagctctgcagatccgagcgacgacgttcgtgactttttgcagcaggagtgcggccac
ctcgcccagcagcatctgaattatttttctcattggctgctgctctgcattctggaagcg
gtcaccatggaaaccaagaacagtcggaagcacatctggcttcagtcaattgagagcagt
gagaagaatggcagctgcgtggggaatctgcagcttaaagatgctgttgcagctcaggca
gaagatgtcttcctgcatcggttccagcggaccggatctgctccttcacagagtgcaacc
aactgtggactgaccaatggagatcgtattgtggtgagcgaccaagatggtcgccttgtc
ggcttggcaacagggtacctgtgcgaggtggataagacatcagtcagttgtactcttagc
agggatttgtccaaattccgggatgtgctgtttcgactggatgctgacgaaggtgtggtc
ggtatgagcactcacctgaccaacctctccagactgatggaaaactgtcaagacagtgag
cgtctgaggaagctgattgtggaccttcgtcctccagagttcatctttaacctcagttct
gttttgcccagagatgccaaagaaacggtggcggagatcctcaaaggtctcaacaaaccc
cagaaacaggctatgaagaaggtgttgctatcaaaggactacacacttattgttggcatg
ccgggcacaggcaagaccacaaccatctgcaccctggtccgtatcctgcaagcatgcggc
tttagtgtgttgttgaccagctacactcactctgctgtggacaacatcctcctgaagctg
aaacgcttccgggtcggttttctgcgcctcggacaaggccaaaagattcatcctgacatt
ctgccatacacagaggagaacgtgaggaagaaaggggttcacaccctgctggatctggag
cagctctataacaaagagctcgtggtagccaccacctgtatgggcatcaagcatccgatc
ttcacgcgtcgccgttttgactactgcatcgtagatgaagcatcacagatcagccagccc
atctgcctgggacccttgttctatgcccacagatttgtgctggttggagaccatcagcag
ctgccacccatagtccagaacaaggaagctcgatctctcgggatggatgaaagtctgttt
aagcgactggaggttcatggtgaggcagtggtgcagctcaacgtacagtaccgcatgaac
aggcagatcatgtctctgagtaactctttgatgtacgacgggcgtttggagtgtggatca
gagaggacagctgcggctctgctcaccttgccctccctggcctcggttcagtcggagctt
cgctcccactctgagactcacccacagcatgacctgtcctgggtgcagttcactctgctg
cccagcaaccctgtctgcttcctggactgttcattggtgccagcgctggagtcggtggag
cagggaggcgtgagcaatcacacagaggctgccctcattcatatgctgctctctcttctc
atcaaggcggggtgcaggcccagtgatgtgggtgtcatagcgccttacaggcaacagctt
aagaccatccaggctcttctccagtctcccactttcagcggtgtggaggtgaacactgtg
gacaaataccagggccgggataaaagtttgattgttttgtcttttgtcaggagcaacaca
gaggaaggacacttaggagaactgttgaaggactggcggcgcctcaatgtggccattacc
agggcgaagcacaaactactgatggtgggctctgccgtgacgctgcgacgctttccacca
gtggagaaactgctcaaccatcttcagcaggagaacatgattgtccagcttccaccggct
gctcacagatctttatccagcatgtttctgtga
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