KEGG   Oryzias latipes (Japanese medaka): 101165385
Entry
101165385         CDS       T02443                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X2
  KO
K14793  ribosomal RNA-processing protein 9
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ola03009]
    101165385 (rrp9)
Ribosome biogenesis [BR:ola03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    101165385 (rrp9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IP5PC_F Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_DCAF12 PEP5_VPS11_N Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd VPS11_N Beta-prop_BBS7 WD40_like
Other DBs
NCBI-GeneID: 101165385
NCBI-ProteinID: XP_004068655
UniProt: H2LDV6
LinkDB
Position
5:7034481..7043732
AA seq 481 aa
MSSSFFIKSNVASQSAKKGKNTAGLKRKVGDAADGKSKLRAKKASSKHNEEISSESETEG
PPVSKKRQPKEDGGYDETPQEKKLRLAKLYLEQLREEEEKKAEDEHFETDLIAGRLQEKV
LEQQGKLQRLIAKELIAPDSTEIRVLRGHKLPITCLVLTPDDKCIFSGAKDCSIIKWDIA
SGKKLHTIPGGRKGTEERHVGHTAHILCMALSSDGKYLASGDTNKLIMIWEGETCKHLYK
FTGHKGPVSGLSFRKGTHDLYSASHDRSVKVWNVDENAYVETLFGHQDAITGLDSLSRER
CVTAGGRDGTVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGADDGSVSLWSVNKKK
PLSTVKQAHGCHGDAGLEQPHWVSSVAALQNSDAVASGSHNSQVNVWKCGQHYRGLELLF
SVPVSGFVNDLKFSSSGHFLVAGVGQEHRLGRWWRLKEAKNGIFIIPLKRKPSSEEPKTT
Q
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgtcttcgtcattctttataaagtcaaacgttgcttcccagtcggcaaaaaagggcaaa
aacacagcaggactcaaacgaaaggttggtgatgccgcagatgggaagagcaagttacga
gccaagaaagccagcagcaaacacaacgaggagatatctagcgagtctgaaacagaaggt
cccccagtgtcaaaaaagaggcaacccaaagaagatggagggtacgatgagactccccaa
gagaagaaactcagattggccaaactttaccttgaacagctaagggaagaagaggaaaaa
aaggcagaagatgaacactttgagacggatctgatcgctggaagattacaagaaaaagtg
cttgaacagcagggaaagctccagcggttaattgccaaagagctcattgcaccagattct
acagagatccgggtgttaaggggacacaagcttcccatcacttgcctggtcttaaccccc
gatgacaagtgcatcttttctggtgccaaagactgctccatcatcaaatgggatattgct
agtggcaagaagctgcacacaataccaggtggcaggaaggggacagaggaacgccacgta
ggacacactgctcacattctgtgtatggccttatcatctgacggaaaatacctggcctca
ggagacacgaataaactcatcatgatttgggagggagagacttgtaaacatctgtataaa
tttacaggacataaaggccccgtgtcgggtctgtcattcaggaagggaactcatgattta
tacagtgcttctcatgatcgttcggtcaaggtgtggaacgttgatgagaacgcatatgtg
gaaaccctttttggccatcaagacgccatcacaggcctggacagcttaagccgtgaacgc
tgtgtgacggcaggggggcgggatggcaccgtcagagtctggaagattgcagaggagtct
cagctggtgttccacggacacgaaggctcgattgactgcatccaactcatcaacgaggag
cacatgataacaggagcagacgatggctctgtgtctctttggagcgtcaacaagaagaag
cctctcagcactgtgaagcaggctcacggttgtcatggtgacgcggggctggagcagccg
cactgggtgtcctctgtagcagcccttcagaactcagatgctgttgcctcaggttctcac
aactcccaggtgaatgtgtggaaatgtgggcagcattatcgtgggttagagcttttgttc
agcgtgccggtgtcaggttttgtcaacgatttaaagttttccagctctggtcatttcctg
gtggcgggagttggacaggagcacaggttgggccgatggtggaggctaaaggaagccaaa
aatggaatcttcataattcctctgaaaagaaaaccaagttcagaggaacccaagacaacc
caataa

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