Oryzias latipes (Japanese medaka): 101165472
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Entry
101165472 CDS
T02443
Symbol
snta1
Name
(RefSeq) alpha-1-syntrophin isoform X1
KO
K24063
alpha-syntrophin
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101165472 (snta1)
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Motif
Pfam:
Syntrophin_4th
PDZ
PH_17
PH
PDZ_6
SOS1_NGEF_PH
PDZ_2
Motif
Other DBs
NCBI-GeneID:
101165472
NCBI-ProteinID:
XP_023810678
UniProt:
H2LN83
LinkDB
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Position
5:complement(11937970..11978092)
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AA seq
488 aa
AA seq
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MAAAMKTQKTGLLELRVTVDRWVRVLATLTEDALTLNPGDSADEPAKPGHQSPAGAVNGD
PPNLSSSPVPETITNVKRTVRVTKQDVGGLGISIKGGKENKMPILISKIFKGLAADQTEA
LYVGDAILSVNGYDLREATHDEAVQALKKTGKEVILEVKYIKEMSAFFKSSGSPGASLPW
DSPPSTPQRDPELSPAEGKEPRSVPLKMCQVSRKQCPPDTEDRYFEVTSFNRKNSVFLRA
KDPAMAQSWYNAIQAAAGSLLPQVKEELKIMQPGVQIKHVGWMTEQMRQGPEKAVLAVLT
EKDLLLFPSLPENKQSLSSPTKSHPLITTRLVHSGPGKSCLHADSELSFGLRSGTRQGVE
THVFRVDSAKELSAWTHLLVEGCHNAAELIKEVTTACSWNGKECTLGVHIDEGFTLYTEE
MGVRKSILLQQPFERLRMSSDDGVRMMFLDFGGPEAELQLDLHCCPKTLVFIIHSFLSAK
VRRLGLLA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcgatgaagacgcagaaaacgggactgctggaacttcgagtgacagtggac
cgctgggtccgggtgctggccacgctgaccgaggacgcgctcactctgaaccccggcgac
agcgccgacgagcccgcgaagcccggccaccagagtcccgcaggtgctgtcaacggagac
cccccaaacctgagctcgtccccggtcccagaaaccatcaccaacgtcaagcgcaccgtg
cgggtcaccaagcaagatgtgggcggactgggcatcagtatcaaaggaggtaaagaaaac
aagatgccgatcctcatctcgaaaatatttaaaggcctggcagctgaccaaactgaggca
ctttacgtcggggatgccatactgtctgtcaatggttacgacctacgggaggctacgcat
gatgaggcagtgcaagcgctcaaaaaaactggcaaggaggtcatcctggaagtgaagtac
atcaaggaaatgtctgctttttttaaaagctctggatcccccggagcgtctctcccctgg
gattctcctccctccactcctcagagggaccccgagctctctcctgctgaggggaaggag
cctcgcagcgtacctctgaagatgtgccaggtgtcacggaaacagtgccccccggacaca
gaagacagatactttgaggtgacttcattcaacagaaagaactctgtgttcctgcgggct
aaagacccagccatggctcagtcgtggtacaacgccatccaggctgctgctggcagtctg
ttaccgcaagtgaaggaggaattaaagatcatgcagcctggtgtacaaatcaagcatgtg
ggctggatgacagaacagatgcgtcagggtccagagaaagcagtcctggctgtgttgacg
gagaaagaccttctgctgtttccatcactgcctgaaaacaagcagagcctcagcagcccc
accaagagccacccgctcatcaccaccagattggtccactccggtccaggaaaaagttgc
ctgcatgcggactctgagctgtcctttggcctgcgatcaggaaccagacagggtgtggag
actcacgtgttccgggtggactctgcgaaagagctgtccgcttggacccatttgttggtg
gagggttgccacaacgctgctgagctcatcaaagaggtcaccacggcctgcagttggaac
gggaaagagtgtactttgggagtgcacatcgacgagggtttcacactttatacagaagaa
atgggagtcaggaaaagcattctcctccagcagccctttgagcgccttcgaatgtcatca
gatgacggagttcgaatgatgttcctcgactttggaggccctgaggctgagcttcagctg
gatcttcactgctgcccgaaaacgctcgtgttcatcatccattctttcctgtcggccaag
gtcaggcggctggggctcctggcgtga
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