KEGG   Oryzias latipes (Japanese medaka): 101165549
Entry
101165549         CDS       T02443                                 
Name
(RefSeq) ras-related protein rab7-like isoform X1
  KO
K07897  Ras-related protein Rab-7A
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04137  Mitophagy - animal
ola04140  Autophagy - animal
ola04144  Endocytosis
ola04145  Phagosome
ola04148  Efferocytosis
ola05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ola00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101165549
   04145 Phagosome
    101165549
   04140 Autophagy - animal
    101165549
   04137 Mitophagy - animal
    101165549
   04148 Efferocytosis
    101165549
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    101165549
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ola04131]
    101165549
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ola04147]
    101165549
   04031 GTP-binding proteins [BR:ola04031]
    101165549
Membrane trafficking [BR:ola04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    101165549
Exosome [BR:ola04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   101165549
  Exosomal proteins of other body fluids (saliva and urine)
   101165549
  Exosomal proteins of colorectal cancer cells
   101165549
  Exosomal proteins of bladder cancer cells
   101165549
GTP-binding proteins [BR:ola04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    101165549
SSDB
Motif
Pfam: Ras Roc MMR_HSR1 Arf RsgA_GTPase Gtr1_RagA Septin AAA_5 AAA_24 IIGP AAA_22 AAA_7 AAA_29 GTP_EFTU AIG1 AAA_16 AAA RNA_helicase
Other DBs
NCBI-GeneID: 101165549
NCBI-ProteinID: XP_020559125
LinkDB
Position
5:26357915..26360819
AA seq 204 aa
MSEKTVPLTLKIILIGNSGVGKSSFMNRYVNHRFTNAYRATVGTDFFSKKTVLDGEPVIL
QIWDTAGTERFQSLGTPLYRGSHCCLLVFDVTSSASFGALDAWRKEFLVQGEPLDPSDFP
FIVLGNKTDLSDREVSSRKAQQWCEEVGAEYFEGSAKADVDVEPPFNRAAKLALQQYKKH
TLENTGHFQITCEQPRKTRDTCMC
NT seq 615 nt   +upstreamnt  +downstreamnt
atgtcggagaaaacggttcctctgacgctgaaaattatcctcataggaaactctggagtg
ggaaagtcttccttcatgaacagatacgtcaatcaccgcttcactaacgcgtaccgggcc
acggtgggaacggacttcttcagtaaaaaaaccgtcctggatggagagccggtcatcctg
cagatctgggacacagcaggcacagagaggttccagtctttgggtacacccctgtacaga
gggagccactgctgcttgctggtgttcgatgtcacttcctctgccagctttggggccctg
gatgcgtggaggaaggagtttctggtccagggggagcccctggatccatctgatttccct
tttattgtcctgggcaacaaaaccgacctgagcgaccgagaggtgtcgagcaggaaggcc
cagcagtggtgtgaggaggtcggagctgagtactttgaaggaagcgccaaagcagacgtg
gacgtggagccgcctttcaatagagcggctaagctcgccctccagcagtacaaaaaacac
acattggaaaatacaggacatttccagataacctgcgaacagccgagaaaaactcgcgac
acctgcatgtgctga

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