Oryzias latipes (Japanese medaka): 101165561
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Entry
101165561 CDS
T02443
Symbol
zswim6
Name
(RefSeq) zinc finger SWIM domain-containing protein 6 isoform X2
KO
K25704
zinc finger SWIM domain-containing protein 6
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ola03037
]
101165561 (zswim6)
Cilium and associated proteins [BR:
ola03037
]
Other cilia and associated proteins
Stereociliary proteins
101165561 (zswim6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
DC_STAMP
SWIM
Motif
Other DBs
NCBI-GeneID:
101165561
NCBI-ProteinID:
XP_011477285
UniProt:
H2LI78
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All DBs
Position
9:complement(9209579..9253434)
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AA seq
1131 aa
AA seq
DB search
MDERVQQPPAKRHCWRPGYNSACRQGQRAGGVLCGGTGSAPGGSGNGKTHNPESLLDIAA
RRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEKEICMYSSFNAGGEESGTSGDNND
ETQLPFLRGVTLLESGWVDNVLQVGFHLSGTVTDPATSPELVCNVSVSFDRCKITAVTCT
CGNKDIFYCAHVVALSLYRVRKPEQVKLHLPISETLFQMSRDQLQKFVQYLISVHHTEVL
PTAQKLADEILSQNSEINQVHGAPDPTAGASVDDENCWHLDEEQVQEQVKLFLSQGGYHG
SGKQLNLLFSKVREMLKMRDSNGARMLTLITEQFMADPRLALWRQQGTTMTDKYRQLWDE
LGALWMCIVLNPHCKQEQKSSWLRQLRRWNSVDVCPWEDGNHGNELPNLTHSLPQGAHGN
QEMRPHRTVFTRAIEACDLHWQDRHLQHIIASDLYANYCYHDNQEGSLFDSRGWPLWHEH
VPTACARVDALRSHGYPREALRLAIAVVNTLRRQQQRQLEHFRRHKKELLHKGHTSITNM
EGWVGHPLDPIGTLFSTLTESGRVGDEGANICLDLSDCSSVVSRADLQRMPVQRLLGDGE
SYMALAVETALIGLGQQRVMPDGLYAQEKVCRNEEQLLAKLQEVELDDSLVKIFRKQAVF
LLEAGPYSGLGEIVHRESVPMHTFARYLFTSLLPHDAELAYKIALRAMRLPVLESTASSG
DLSRPHHIVSVVPNRYPRWFTLSHIESQQCELASTMLTAAKGDSRKLETVLESIQKNIHS
SSHIFKLAQDAFKIATLMDSLPDITLLKVSLELGLQVMRITLSTLNWRRREMVRWLVTCA
TEVGVYALDSIMQNWFTLFTPTEATSIVATTVMSNSTIVRLHLDCHQQENLASSARTLAL
QCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAAATGMSYTQLFTIARYMEHRGYPMR
AYKLATLAMAHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAVIPLVVKSVKCATVLS
DILRRCTLTTPGMVSALHSRRNSGKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRH
YSEFIEFLGKARETFMMAHDGHIQFTQFIDNLKQIYKGKKKLMMLVRERFG
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcgagtccagcagcccccggccaagcggcactgctggcggcccggctataac
tcggcatgcaggcaggggcagcgggctggaggggtcctgtgtggcggtacgggctccgct
ccgggaggctctgggaacggaaaaacgcacaaccccgagtcgctgctcgacatcgcggca
cgtcgagtcgcggagaagtggccgtttcagcgggtggaggagcgcttcgagaggatcccg
gagcccgtccagcggaggatcgtatactggtcatttcctagaagcgaaaaggagatctgt
atgtattcttctttcaacgccggaggagaggaaagtggaactagcggggacaacaatgat
gagacccagctgcctttcctacggggtgtcactctgttggagagtggctgggtggacaac
gtattacaagtcggtttccatctgagtggaacggtgacggaccccgccacgtctccggag
ctcgtctgcaatgtcagcgtcagctttgaccgctgcaagataactgctgtgacgtgcaca
tgcggaaacaaggacatcttctactgcgcccacgtagtggcactttccctttacagagtc
cgaaaacccgagcaggtcaagctgcatctgcccatctcagaaaccttattccaaatgagc
agagaccagctgcagaagtttgtccagtacctgatctcagtccaccacactgaggtgctg
cccaccgcacagaaactggcagacgagatcctgtcgcagaactcggagatcaaccaggtt
cacggggccccggaccccacggctggggccagcgtggacgatgaaaactgctggcacctg
gacgaggagcaggttcaggagcaagtgaagctcttcctgtcccagggaggataccacggc
tcgggcaagcagctcaacctgctgttcagcaaggtgagggagatgctgaagatgcgtgac
tccaacggagcgaggatgttgacgctgatcacagagcagttcatggcggaccctcggctg
gcgctgtggagacagcagggcaccaccatgaccgacaagtacaggcagctctgggatgag
ctgggtgccctgtggatgtgcatcgtactgaacccccactgtaagcaggagcagaagtca
tcgtggctgcgccagctgcgcagatggaacagcgtagacgtctgcccgtgggaggatgga
aaccacggcaatgagctgcccaacctcacccactccttgcctcagggtgctcacggaaac
caagagatgcgtccccacaggactgtttttacacgagctatcgaggcctgcgacctgcac
tggcaggaccgacacctccagcacattatcgccagtgacctctatgccaactactgttac
catgacaaccaggagggctccctcttcgactcgcgtggctggcctttatggcacgaacat
gtcccgacggcgtgtgctcgagtggatgccctgcgttcccacggttaccccagagaagca
ctgcgactggccattgctgttgtgaacacgttacgaaggcagcagcagaggcagctggag
cactttagacggcacaaaaaagaattgctccacaaaggccatacttccataaccaacatg
gagggctgggtgggacaccctctggatcccatcggtactctgttcagcaccctgacagag
tcgggacgggtgggcgatgaaggtgccaacatctgtttagatctttcagactgttccagt
gttgtgagcagagcagacctccaacgaatgcccgtgcagcgattgctaggggacggtgaa
tcgtacatggcgttggcagtggagacggctctgattggcttgggccagcagagagtaatg
cctgatgggctgtacgctcaagaaaaggtgtgtcgcaacgaagagcagctgttggccaag
ctgcaggaagtggaactggacgactccttggtcaaaatcttccgtaaacaggccgtcttt
ctgctggaagccggcccgtactctggcctcggagagattgtccacagagagagtgttccc
atgcacaccttcgcccgctatctcttcacctctctcctacctcacgacgctgaactggcg
tacaaaattgcactgagagccatgcggttgcccgtgttggagtccacggcctcgtctggt
gatctctcccgaccgcaccacattgtgtctgtagttcccaaccgctacccgcgctggttc
accctcagccacatagagtctcaacagtgtgagctggcctccaccatgctcactgccgcc
aaaggtgacagccgcaagctggagacggtcctggagtcgatccagaaaaacattcactcc
tcgtctcatattttcaaactggcacaggatgcgttcaagattgccactctaatggatagc
ctccctgacatcactcttctcaaagtttctctggagctgggactgcaggtgatgagaata
actctgtccacactgaactggaggagaagagagatggtgcgctggttagtcacatgtgcc
actgaagttggggtgtatgcactggacagcatcatgcaaaactggttcaccctcttcacc
cccacggaagcaaccagtattgtggccaccaccgtcatgtccaacagcaccatcgtccgc
ctccacctggactgccaccagcaggagaacctggcttcatctgcacgcacgctggccctg
cagtgtgccatgaaggacccccagaactgcgccctctctgctcttacactctgtgaaaag
gaccacattgccttcgagacagcctaccagattgtactggatgcagcagccacaggaatg
agctacacgcagctgttcactattgcacgctacatggagcaccgcggatacccgatgcga
gcgtataagttggccacattagctatggctcatctgaacctgagttacaaccaggacacg
cacccagccatcaatgacgtactgtgggcctgtgcgctcagccactccctgggcaagaac
gagctagccgctgtaattcccctagtggtcaagagcgtaaagtgcgccactgtgctctca
gacattttgcggcgttgcacgctgaccacgcccggcatggtttcggctctgcacagccgc
aggaactctgggaagttgatgtcactggacaaagcgccgctcaggcagctgctggacgcc
accattggggcgtacatcaacaccacgcactctcggctcacgcacatcagcccgcggcac
tacagcgagttcatagagttcctgggaaaggcccgggagacgtttatgatggctcatgac
ggacacatccagttcacccagttcatagacaacctgaaacagatctataagggcaaaaag
aaactaatgatgctcgtgagggagaggtttggctga
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