Oryzias latipes (Japanese medaka): 101165590
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Entry
101165590 CDS
T02443
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101165590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101165590
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101165590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Motif
Other DBs
NCBI-GeneID:
101165590
NCBI-ProteinID:
XP_011484938
LinkDB
All DBs
Position
17:21107575..21131514
Genome browser
AA seq
2464 aa
AA seq
DB search
MAVVLLQVLERTELNKLPKGIQNKLEKFVTELQNANEALKTQHERLKADSEQQYFDIEKR
LAEGQEQMLSATKELQTLQEENKKLNEELCALKGIEGDSNESKPMQQQTKTKYEIEAEKR
ELARVLEKKTQEVENLTEEMKRLNENLAETNKVRMELQLKLDEIQSSAASVQHREKRMEQ
EKELLEKKIEWLTAELKTKTEELLNTERDKGNEILELQANLKSRSEQVFTLESQLTSLKE
TSESQSRRAEDLNSKLKQVKDEQNAMEEKYRNELNAHVKLSSLYKGAATDMEVKNQELNR
AVEELSKLVKDTGEANKALEKKVSESEEQKMRLEAELKEKIKKMEKELENAAVKAAAKRC
CVPSLTEDQLNSMCPSAAAIAAIVKPDMKFFDLYNAYAECQTQLQLEKQETKRVSRVLDE
IVHEVESKAPVLKRQREEYESMQRSMASLCSKLEQARAEIYSLQKEKEEAKQRCDELERD
KLKTERQLEDASSQLCALLVELEEARGNQVSKSDGSSADISSTSEDAGSSPLTYRSVVEL
QRQNQSLLGRLRDLEEEKDKQQARFTTARIAELESGVDKLQKEVELLKEQRNQQKQLADS
SARQRDMFKTLLTQSTGFSLPTQGQDPSPQPDRPSAPATRSTPQRAAAAEAAQTAQTKAA
LKQLSDAFTLYKKEKAENDRMLNETNDRLQKQLTELRSSHAKLTSQLEFSNRRYEMLQET
LAAYRREIAALQERNHKMIATTQQQEHIIHTMSHELRQATEKLALEEVRVENITKERDMI
RQAETRLCREKEATLAEQCNQKLLLTNIKSIQLSMERTETETRQRLNNRIEHLEKELVSM
KARIEQEVSQRHALGRTMDAQLLEAKKQLETQNTLQQKTRELLRSSEQQVAALKAQLASA
SFAEATTSSSSTSAPVTRAAGLRVPLRVRSPGPAASQQPSQSEQEQSELKGLLRSAEEQS
TELAEQLKTANSTVEQYRSVVLALEDSLKKEKELRSPLESRLKETEELQRQLETRILELE
KMKEQEQEEKRKSVEAVEKQVCELQRSLKASQTEQQEALERAAAAVTQEQKAIQDSLLQT
KLAAEAQGKYERELMLHAADVEALQQLKKTSQQHAARIRQLEEELKKTDALLQEKSAALN
TVEKQLKENLANQIRRCDELGKQNNLLHQQMDEMAAKSRLQQQQQQQQQQQQLDLSFSEE
EKTTEQILEILRFVRREKEIALAQCEAYEGEALRHKQRVEHQDRELKELQEALNSEREKM
QLTTKTLAQQQEQLKRMESINALQETNKMLKMDRNKLEQELQQAQAKVTKLQSDISPLQN
SLSLLSEKNSSLQADKRLLEEDLKRCRNRIQQLISQQKTGDSEERQKLTSEREAQQKRIS
QLVEESAKLKTELARSNAGSNSAHSQIQALKDSMVHLMSERDTLKKDLEAKNNDIQEKNK
TITQVKKIGRRYKTQFEELKAQHDKLVSESATKGGGEPSPSQEAQQELTKTQEELKKTQE
ELNSLREELQKKQEEAQKSQQELEEAQKDNQQTKKKLQEIQNQLTQLQSQLSQTQNQLQQ
SQNQLTQSQKELQQAKNQTQQVQHQFKSAQAQALTRQTMIQQIQRELQQAKDQNLTKNKE
LQQATQEVNNLRSALTQAENKVTELQGQLDSVQKTVAEREQDVKRLQDQLNEAKQPNEAG
TAVQANQSQSGLVAVDSKDEVEKLKQELAESKSREEQLKQQMAEKEEKTKKAIVGAKAKI
SQVNSAKEKLSQEVEELKQTKEELEVRMNALKSQYEGRILRLERELRETQAHSDSREEPQ
DQSGAKVSDHSRSSEQRQISLKSPAQDRGSSSLAEPPTANIRPTTSTPSPSNKPSTSAGS
KATPRASIRPMVTPATVPTPTPTATVMPTTQAESQESLMSAGASVHSTSSSLMNTQTSIG
QPTSTQATAFVQPTQQQATSQDAGSSTEVERPSTSSSLAGTATSKRTREEEEEEEQSSRP
ESSHVPPTTKKLRLKQTIALQIKSDEEEELRNEEGERDSPDDTQELPDEDFPVLVAEVEE
DSVSQSVPYDQSSQGSAIIRDVIVIDTDSESRESKEGEQTQEGEGEEEEAEEEEQEEEFD
VAADNGTRGEDEGDEESREAETEEEASSGGTNPEESACGVSSGSQIASEQTQSGEGTSGV
ASESEAPRDPTHLPPSCSSSHLTPVTSRLLHIRRPRDTLLPQLNIQPPAPELGPPHSQRQ
YSQSRRTSAGRGPQLTPGIGAMPFFDEDDRMVPSTPTLVVPHRTDGFAEAIHSPQVSHLP
ISFRFGAPEDLLPQTSASHSDLGQLASHGGLGLYESPLFLAAHDEDGGGRSVPTTPLQVA
APMTVFTETLPSDTGDNMASQSVPMVTASTEMVAAPDDGDEVFMEQEGDGASMESSLESM
ESTRQPTEGSSLPSTSQDPDMSSAAQRRAVTSQPLISRLTSSGRKMFLSRPGGRGGPSGR
GGVS
NT seq
7395 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggttctgctgcaggtcctcgaacggacggaacttaacaagcttccgaaaggc
atccaaaacaagctcgagaagtttgtgacggagttgcagaatgctaacgaagcgctcaag
acgcagcatgagcgcctcaaagcagatagcgagcagcaatactttgacattgaaaagagg
ctggcagagggtcaggaacagatgctttctgctaccaaagaactacagaccctacaggaa
gaaaataagaagctaaatgaagagctgtgtgctctcaagggaatagagggagactccaat
gaaagcaaaccaatgcagcagcaaaccaaaaccaagtatgaaattgaggcagagaagcgg
gagttggctcgggtactggagaagaaaacgcaggaggtggagaatctgacagaggaaatg
aagcgtcttaatgaaaacctggcagaaaccaacaaagtgaggatggagctgcagttgaaa
ctggatgaaatacagtcgtctgcagcctctgtgcagcatagagaaaaacggatggagcag
gagaaagaacttctggagaagaagattgagtggctgacagcagagttgaaaacaaaaaca
gaagaactactgaacactgaaagagacaaaggcaatgagattctggagctgcaggccaac
ctcaagagcagatctgagcaggtgttcacgttggaaagtcagctgacttctctgaaagaa
accagtgaaagtcagagtagaagagctgaagacctcaacagcaaactgaaacaggtgaaa
gatgagcagaatgccatggaggagaaataccgcaatgagctcaatgcccatgtcaagctg
tcctcactttacaagggggcagcaactgacatggaggtcaagaaccaagagctgaataga
gcagtggaggagctgagcaagctggttaaagacacaggtgaagccaacaaggctcttgag
aagaaagtctcagagagtgaagagcaaaagatgcggcttgaggcagaactcaaagagaag
attaagaagatggagaaggagctggaaaatgctgcagtaaaggcagcagccaagcgctgc
tgtgtgccctctctgactgaggatcagctgaactctatgtgtccgtcagccgctgccatc
gcagccatcgttaaacctgacatgaagttctttgacctatataatgcgtatgctgagtgc
caaacacagctgcagctcgagaaacaggagacaaaaagggtgagccgagtcctggatgaa
attgtccatgaagtggagtccaaggcgccggttctcaagcggcagagagaggagtatgag
agcatgcagaggtccatggcctccctgtgcagcaaactggaacaagctcgggctgagatc
tacagcctgcagaaggagaaggaggaggccaagcagcgctgtgatgagctggaaagagac
aaactgaagacggaaagacagctggaagatgcatcttcacagttgtgtgctctgctggtg
gagctggaggaagccagaggaaaccaggtgagcaagagtgacggcagctcagcggatata
tccagcacctctgaggacgctggctccagcccgctgacctaccgcagtgtggtggagctc
cagaggcagaaccaaagcctgctgggaaggctgcgggatctggaggaggagaaggacaaa
caacaggcccgctttacaacagcacgaatagcagagttggagtcaggtgtggataagctt
cagaaggaggtggagctgctgaaggaacagaggaaccagcagaaacaacttgcagactcc
agcgccaggcagagagacatgttcaaaacgctgctgactcagagcacaggcttcagcctt
ccaactcaaggtcaagacccctccccgcagcccgaccgtccctcagctccagccactcgc
tccactcctcagagagctgcagctgcagaggctgcacagactgctcaaactaaagcagct
ttaaagcagctcagcgacgccttcactctgtacaagaaggagaaggcggagaacgaccgg
atgctgaacgaaacaaacgatcggctgcagaaacagctgacggagctgcgctccagtcac
gccaagctcacgtcgcagctggagttcagcaacaggaggtatgaaatgctccaagagact
ctagcggcgtaccgcagagagatcgctgctctgcaagagcggaaccacaaaatgatcgcg
acaacgcaacagcaggagcacatcatccacaccatgagtcatgagctgaggcaggctaca
gagaaactggcactggaagaggttcgtgtggagaacataaccaaggagagagacatgata
agacaggcggagacccgactctgtcgagagaaggaagccactttggctgagcaatgcaac
cagaaactgctgctcaccaacatcaaatccattcagctgagtatggagcggacagagaca
gaaactcgtcagcgactcaataatagaatagagcacctggagaaagagctggtgtcaatg
aaggccaggattgaacaggaagtgtcgcaaagacatgctctggggcgcaccatggatgct
cagctgttggaagcaaagaagcagctggagacccagaacacgcttcagcagaagaccagg
gagcttctgcgcagctctgaacagcaggtggctgcattaaaggcccagctggcctctgct
tctttcgctgaggcgactacgtcctccagcagtacttctgccccggttactagagctgca
ggcctccgagtgccactgagagttcgctctccaggacctgctgcatctcagcagcccagc
caatcagagcaggagcagtcagagctgaaaggtctcctccgcagtgctgaggagcaaagc
actgaattagcagagcagctgaaaacggcaaactccaccgtggagcagtaccgatcagtg
gttcttgctctggaggacagtctgaaaaaagaaaaagagttacgctcccctctggagtca
cgactcaaggagacagaggagctgcagaggcagctggagacgaggattttagagttggag
aaaatgaaagaacaagagcaggaggagaaaaggaagtctgtggaagctgtggaaaaacaa
gtttgtgagctgcagcgcagtctgaaggcaagccagactgaacagcaggaggcgctagag
agggcagctgccgctgtaacacaagaacagaaggccatacaggacagcctactgcagacc
aaactcgctgcagaggcgcagggcaagtatgagcgggagctgatgcttcatgctgctgat
gtggaggctcttcagcagctgaagaaaacatcccaacaacatgcagcacggattagacaa
ctagaggaggaactgaagaagactgatgctctccttcaggagaaaagtgcagcgttaaac
acagtagagaaacagctgaaggagaacctggccaatcagatccgtcgctgtgatgagctg
ggaaaacagaataatcttcttcaccagcagatggatgaaatggctgcaaagagccgcctg
cagcagcagcagcagcagcagcagcagcagcagcagctggacctgtccttcagtgaagag
gagaagactacggaacagatactggagattctcaggtttgtgaggcgggagaaggaaatc
gccttggctcagtgtgaggcgtatgaaggcgaagctctacgccacaaacagcgagtggaa
catcaagacagagaactgaaggagctgcaggaagctctaaactcagaaagggagaaaatg
cagttgacaaccaagaccctggcccagcagcaggaacaactgaagaggatggagagcatc
aacgctctccaagaaaccaacaagatgctgaaaatggacagaaataaactggagcaggag
ctgcagcaggctcaggctaaagtgacaaagctgcagtcagacatcagccctctgcaaaac
tctctgtctctgctgtcagagaagaacagctccctgcaggcagataagaggctgctggag
gaagatctcaaacggtgcaggaacaggatacagcaactgattagtcagcaaaagaccggt
gactcggaggagagacaaaagctgacatcagagagggaggctcagcagaaacgcatctca
cagttggtcgaagagtcagctaagctgaagactgagctggccagatccaacgcaggcagt
aattctgctcactctcaaatacaagccctcaaggattctatggtccacctgatgtcagag
agagacactctgaagaaagaccttgaagcaaaaaacaatgacattcaggagaagaacaag
accatcacccaggtgaagaagatcgggcgacgctacaagacgcagttcgaggagctgaaa
gcccagcatgacaagctggtcagcgaatctgctaccaaaggaggaggtgagccgtctcca
agccaggaggcccagcaggagctgaccaaaactcaggaggagctcaagaagacccaagag
gagttgaattcactgagggaggagctgcagaaaaagcaggaagaggcccaaaaatcccaa
caggagttggaggaagcccagaaggacaaccagcagacaaagaaaaagcttcaggagatc
cagaaccagctgacacagcttcagtcccagttatcacagacacagaaccagctccaacag
agtcagaaccagctgacccagagtcagaaggagcttcaacaagccaagaaccagacccag
caggtacagcaccagttcaagtcagcgcaggctcaagctctgactcgtcagaccatgatt
cagcagatccagagggagctccagcaggcaaaagaccaaaacctcaccaaaaacaaagag
cttcagcaggccacccaggaagtgaacaaccttagatctgctctgactcaagcggagaac
aaggtgactgagcttcaggggcagctggacagtgttcagaagactgttgctgagcgtgaa
caagatgtaaagcgtttgcaagatcagctgaatgaagcaaaacagcccaatgaggccgga
accgccgttcaggcaaaccagagccaaagtggtctagttgctgttgattcgaaggatgag
gtggaaaaactcaaacaagagctggctgagagcaaaagcagagaagagcagcttaaacag
cagatggctgaaaaagaggagaagaccaaaaaggccatagttggagccaaagctaaaatc
agccaagtaaacagtgctaaagagaagctaagtcaggaggtcgaagaactgaaacaaact
aaggaagagcttgaggtgaggatgaacgccctgaagtctcaatatgaaggacgaattctt
cgactggaaagagagctgagagaaactcaagctcactcggactccagagaggaacctcag
gaccagagcggagccaaggtgagcgatcacagccgatcgtcagaacagcgacagatctca
ttgaagagtcctgctcaagacagaggaagttccagcctcgctgaacctcccactgccaac
atccgtcctactacaagtactccgtctcctagcaacaagccaagcacctctgctggcagc
aaggcaacaccccgtgccagcatccgacccatggttaccccagcaacagtcccaacgccg
acacctacagccaccgtcatgccgaccactcaggctgaaagtcaagagtctctgatgagt
gcaggagcttcagtccactccaccagctcctctctgatgaacactcaaacctccataggt
cagccaaccagcactcaggccacagcttttgttcagcccacccaacagcaggcaaccagt
caggatgcagggtccagcacagaggtggagcggccatccacatcctcgtctctggcagga
acggctacgtctaaaagaactagagaggaggaagaggaggaggagcaaagcagcaggcca
gagagttcccacgtacccccaactactaaaaaactacgactcaaacaaacaattgcactg
cagattaaaagtgatgaagaagaggagctaaggaatgaggaaggagaacgggattcacca
gatgacactcaggaactccccgatgaggattttcccgttttagttgctgaggtcgaggag
gatagcgtttcccagtctgtcccctatgaccagagctcccaaggctccgctataatccgg
gatgtgatcgtcattgacacggacagcgagagtcgggagagcaaggagggggagcaaacg
caggaaggagagggggaagaggaagaggcggaggaagaagagcaggaagaggagtttgat
gttgccgctgacaacgggacaagaggagaggatgagggtgacgaggagagcagagaagcc
gagacagaggaggaagcatcgtcgggaggcaccaaccctgaggagagcgcctgtggagtg
tcttcaggctctcagatcgcctctgagcagacgcagagcggggagggtaccagtggcgtc
gcgtcagaatctgaagcccccagagaccccacacacctccccccaagctgctcctcgtcg
cacctcacacccgtcacatcccgcctcctccacatacgaaggcccagagacactctcctg
cctcagctcaacatccaacctccggctcctgaactgggacccccccactcacagagacag
tactctcagtcacgcagaacgtctgcgggtcgtgggcctcagctgacccctggaatagga
gcaatgcctttctttgatgaagatgacagaatggttcccagcacccccaccctggtcgtt
ccacaccgcactgacggcttcgctgaagccatacactctcctcaggtgtcacatttgccc
atcagcttcaggtttggggctccagaagatttgctgcctcaaacatcagcctcacattct
gacttgggtcagctggcctctcatggaggtctgggattgtatgaatctcctcttttcctg
gctgctcatgatgaagatggaggaggaaggagcgtacccaccacacccttgcaggtggcc
gcaccaatgactgtattcacagagacgcttccttcagacactggggacaacatggcctct
cagtcggttcccatggtaactgcttccaccgagatggttgctgctccagatgatggagac
gaagtcttcatggagcaggaaggagatggtgcaagcatggagtcttcactagagagcatg
gagtcaacaagacagccgactgaagggtcgtcgctaccatcaaccagccaagaccctgac
atgagcagcgcagctcagcggcgcgcagttacgagtcagcctttgataagccgcctcaca
agctcaggcagaaagatgtttctgagccgaccaggaggaagaggaggaccgtcaggcaga
ggaggcgtgtcctaa
DBGET
integrated database retrieval system
