Oryzias latipes (Japanese medaka): 101165682
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Entry
101165682 CDS
T02443
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04510
Focal adhesion
ola04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101165682
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101165682
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Alanine_zipper
Lipase_GDSL
Motif
Other DBs
NCBI-GeneID:
101165682
NCBI-ProteinID:
XP_004083323
UniProt:
H2MQD3
LinkDB
All DBs
Position
23:complement(20565125..20592568)
Genome browser
AA seq
1778 aa
AA seq
DB search
MLLLIFTFTAWALWCPVWTQEPEFADVCTEGSCYPATGDLLIGRAHKLSASSTCGVSQPT
RFCIVGHLEEEKKCFLCDSRQMYDEETNNISHTIENVVTTFAPNRLKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMMIERSMDFGKSWQIYRYFAYDCETSFPGISTGPM
VRVDDIICDTRYSDIEPSKEGEVIFRVLDPAYDIEDPYSLRIQNMLKITNLRVKFIKLHT
LGDNLLDSRDEVTEKYYYALYDMVVRGNCFCYGHASECAPMDGEPSGAEGMVHGRCMCNH
NTEGLNCERCQDFYQDLPWRPAQGKNTHACKRCDCNHHATSCHFDLAVFMMTGNVSGGVC
DNCQHNTMGRQCEQCARFFYQHPNRHLRDPNICEPCDCDPDGSVEGGNCDPRTDVAAGLI
SGQCRCKANVEGERCDNCRRGYYGLGKHPEGCLPCTCNQLGTMPGGAHCDSETGKCICKR
LVDGHNCDQCLPEHWGLSNDMDGCRPCDCDHGGAVHNNCDPDSGQCVCREHMFGRRCDQV
ESGFYFIDLDHYTYEAEDAKHGPGVAVVPRPYPLNRSPTWTGMGFVNVPEGAYLEFNVNN
IPESMDYDILIRYEPQLPQQWEQLVLRVERPVFNPPNRSGHCTNSIQSGDEQSISLSPGS
RHVLLVRPVCFEKGLNYTIRLTLPLYSTNSHVQNPYTLIDSLVLMPRVRELEMFHGTKGE
AEWDTFQRYRCLESSRNVIKSPMTDICKDYIFSVSALLHKGAMACQCDPQGSLSSVCESS
GGQCRCRPNVVGRNCDHCAPGTFLFSPAGCRPCNCDPLGSVRAFCHELTGQCECVRGATG
RQCSQCLPGFWGFPQCRMCQCNGHSDYCHPNTGECQGCRDFTTGHHCERCMNGYHGNPEL
GSGEHCRPCMCPDGPRSGRQFSDSCYLLADSDHLVCVCSSGYKGSRCDECAPGYYGNPLV
PGGRCMACQCNNNIDMHDPKSCDSRTGACLKCLYHTEGHACQHCKPGYYGNAATQSCTKC
MCSPFGTEQEACSSAEGCQCDRRSGQCPCQPNVVGQNCDHCAPDTWGISSGKGCQRCDCD
PVHSVGSSCDEVTGQCVCKPGFGGRTCRECKELFWGDPKVKCHACDCDPRGISSGQCHRA
TGHCACLESASGPRCDTCARGHWGEFPACEPCHRCFPVWDTVVSELANQTRRLQAQVTEL
HAIRVTAPYKDLISSLESNAKAVREILENKTASAKMEKIAEDSHQIIGLMSYLSGVMNST
EETLTFLQGDANMTEANLDALTAEADQLDANVQELRRLVHNIKNANIQGAMSTISAAHLE
STVAERRSTASTSGPGSPLQESAALRKTAGDKLSRSQRDFDRKNQRHTQKLEKLSKELEK
LNLTHLSEKTCGGAGEDAGCPPCGGLGCSGDDGQPRCGGEGCGGLLSASQTALTSAERLD
QQIRAAMREVDELSRMVWEANIRAKEAKERAVEAQQNSNRSKERVERSNQQLRGLITEIR
DLLSNDKADVSVIEAVANEVLALEMPASAEKLQELTREIREKVGTLTSVETILRQSAEDI
RAAESLLRRAKEASAKASDMKEEAQVVKGALEETERAQNTAMDAILLAQNNTRGTMDLLN
TVEQETAASELRLSNTTRRLVQLEREVGRLRQNGLRMNQLVDRAEQDSHQAKQEAELAEK
EFEDDVRDGFEEAQEQVEDQGAALLEARRRADELQREAGELLEQSSNKLQRLGELERSYE
DNQRILEEKAAELEQMERTARRILEEISHKVTLYSTCL
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttctaatcttcactttcacagcttgggctctgtggtgccccgtctggactcag
gagccggagtttgcagacgtttgcacggagggcagctgctacccggccaccggtgacctt
ctgatcggtcgggcgcacaaactcagcgcctcctccacctgcggcgtgtctcaaccgact
cgcttctgcatcgtaggtcacctggaggaggagaagaaatgttttttgtgcgactcgagg
cagatgtacgacgaggagaccaacaacatcagtcacaccatagagaacgtggtcaccacc
ttcgcccccaaccgcctgaagacctggtggcagtccgagaacggcgtggagaatgttacc
atccagctggacctggaggctgagtttcatttcacacacctcatcatgaccttcaagacc
tttcgtcctgctgctatgatgattgaacggtccatggactttgggaaatcctggcagatc
taccgttactttgcctacgactgcgagacgtccttcccgggcatttccaccgggcctatg
gtcagagtggacgacatcatctgtgacacccgctactcagatatcgaaccatccaaagag
ggagaagtgatattccgagtgctggaccccgcgtatgacattgaagacccctacagtttg
aggatacagaacatgctgaagatcacaaacctgagagtgaagttcatcaaactccacacg
ctgggcgataatctgctggactcccgtgacgaggtgacagagaagtactactacgctctc
tacgacatggtggtccgaggaaactgcttctgctatggtcacgcctcggagtgcgccccc
atggacggagagccaagtggagctgaggggatggttcatggtcgctgtatgtgcaaccac
aatacggaagggttgaactgtgagcgctgccaggacttctatcaagatttaccctggagg
cctgcacaaggaaaaaacacacacgcctgcaaaaggtgtgattgtaaccatcacgccaca
tcgtgccactttgacctcgccgtgttcatgatgaccggcaacgtgagcgggggcgtgtgc
gacaactgtcagcacaacaccatgggccggcagtgcgagcagtgtgcgcgtttcttctac
cagcaccccaacagacacctgagagaccccaacatctgcgagccgtgcgactgtgacccg
gacggctcagtggagggtgggaattgtgaccctcgaactgatgtggcagcggggctgatc
tcaggtcagtgtcgctgcaaggccaacgtggaaggagagcgctgcgacaactgcaggcgg
ggctactacggcctgggaaaacaccccgagggctgcctgccatgtacctgtaaccagctg
ggaacgatgcctggaggagcccactgtgactcagagacggggaaatgcatctgcaaaagg
ctcgttgatggacacaactgtgatcagtgtctgccagagcactggggtctgtcaaatgac
atggatggatgcagaccatgtgactgcgatcatggtggggccgtccacaacaactgtgac
cccgactctggacagtgtgtgtgcagggagcacatgtttggacgccgctgcgaccaggtc
gagtctggtttttacttcatcgatctagatcattacacttacgaagcagaagatgccaag
catggacctggtgtggcagtggtaccaaggccttatcctctaaaccgaagccctacatgg
actgggatgggctttgttaatgtgccagaaggagcttatctagagttcaatgtcaacaac
atcccagaatccatggactacgacatccttatccgctacgagccacagcttccacagcag
tgggagcagctcgtcctccgggtggagcgtcctgttttcaatcccccaaaccgctctggt
cactgcaccaactctatccagagcggagacgagcaatccatctccttgtcacctggatcc
agacatgtgctgctggtgaggcctgtgtgctttgagaagggcctgaactacaccatccgc
ctcacactgccgctgtactcgacgaacagccacgtccaaaatccatacacactcattgac
tctctggtgctaatgcctcgagtcagggagcttgaaatgtttcatggaacaaagggcgaa
gcagagtgggatactttccagaggtaccgatgtctggagagcagcaggaacgtcattaaa
agccccatgaccgacatctgtaaagattacatctttagtgtttctgctttgctgcacaaa
ggagccatggcatgccagtgtgatcctcagggttccctcagcagtgtatgcgagtctagt
gggggtcagtgccggtgccggcctaacgtagttggcagaaactgtgaccactgcgctccg
gggaccttcttgttcagtcccgctggctgcaggccttgcaactgcgaccccctgggctcc
gtcagagctttctgccacgagttgaccgggcagtgcgaatgtgtccgaggagccactgga
cgccagtgttcccagtgtctgcccggcttctggggcttccctcagtgccgaatgtgccag
tgtaatggccacagcgactactgccaccccaacaccggggagtgccagggctgccgagac
ttcaccactggacaccactgtgagagatgcatgaacggttaccatggtaaccctgagctg
ggttcaggtgagcactgccgcccctgcatgtgtccggatgggccgcgcagtggcaggcag
ttctcagacagctgctacctcctggccgactcagaccatctggtgtgtgtgtgcagcagc
gggtacaaaggcagccgctgtgacgagtgcgctcctggttactatggaaaccctctggtt
cctgggggccgctgcatggcctgtcagtgcaacaacaacatcgacatgcacgaccccaag
tcctgcgactcccgaacgggcgcctgcctcaaatgcctctaccacactgagggccacgcc
tgccagcactgcaaaccgggttactatggcaacgctgccacacagagctgcacaaagtgc
atgtgttcgccctttggaacggaacaggaggcgtgttcctccgccgagggctgccagtgt
gaccggcgcagcggccagtgcccctgccagcccaatgtggtgggtcaaaactgcgaccac
tgtgccccagacacatggggcatcagcagcggaaagggctgccagcgctgtgactgcgac
cccgtccactctgtggggtcttcttgtgacgaggtcacgggacagtgcgtttgcaagcca
ggcttcggtgggaggacatgtcgggagtgcaaagagcttttctggggggatcctaaggtc
aaatgtcacgcttgtgactgcgacccccgtgggatctctagcggccagtgtcaccgcgcc
acgggacactgcgcctgcctggagagcgcgtccggcccacgctgcgacacgtgcgccagg
ggccactggggagagttcccagcctgcgagccctgccaccgctgctttcccgtgtgggac
actgtggtttcggagctggccaatcaaacgcggcgcctccaagcccaagtgactgagctc
cacgccatcagggtcacggcgccatacaaggatctgatcagcagcctggagagcaacgcc
aaggcggtccgagaaatcctggagaacaaaacggcttcagcgaagatggagaagatcgca
gaggattcccatcagatcattggactgatgtcctatctaagtggtgtgatgaattccacc
gaggagacgttgacttttctccaaggcgacgcaaacatgacagaagcgaacctggacgcc
ctgaccgccgaggccgaccagttggatgcaaacgtccaggaactgagacggctggtacac
aacatcaagaacgccaacatccaaggcgcgatgagcaccatctctgctgcacacctggag
tcgaccgtggcggagcgccgctccacagcctccaccagcggccccggaagcccactgcag
gagtccgctgcactacggaagaccgcgggggacaaacttagcagaagccagagagacttt
gaccggaaaaaccagagacacactcagaagctggagaaactgtccaaagagctggagaag
ctaaacctgactcacctcagtgaaaagacgtgcggtggtgcgggtgaagatgcgggatgc
ccgccctgcggcgggttgggctgcagcggggatgacggacagcctcgctgtggaggagaa
gggtgcggcggcctcctctccgcctctcaaaccgctttgacgtcagccgagaggctggac
cagcagatccgagcagctatgcgggaggtggacgagctctccaggatggtgtgggaagcc
aacatccgtgcgaaagaagccaaggagagggcggtggaggcgcagcagaactccaaccgc
agcaaagagagggtggagaggagcaaccagcagctgcgcggcctgatcacagagatccga
gacctgctcagcaacgacaaagcagacgtgtccgtgatcgaggcggtcgccaacgaggtg
ttggctctggagatgccggcctccgcagagaagctgcaagaactgacgagggagatccgg
gagaaggtcggcactctgaccagcgtggagaccatcctccgtcagagcgcggaggacatc
cgggctgctgagtcgctcctgaggcgggccaaagaggccagtgccaaggcttcagacatg
aaggaggaagcccaggtggtgaagggcgctctggaggagactgagcgcgctcagaacact
gcaatggacgccatcctgctggcccagaacaacaccagaggcaccatggacctgctgaac
acggtggagcaggagaccgccgcctccgagctgcggctcagcaacaccacccgccgcctg
gtgcagctggagagggaggtgggccggctcaggcagaacggcctccggatgaaccagctg
gtggacagggccgagcaggacagccatcaggccaagcaggaggcggagcttgcagagaag
gagttcgaagatgacgtgagagacggatttgaggaggcgcaggaacaggtggaggatcaa
ggggcagcgctgctggaggccaggaggagggcggatgagctgcagcgggaagctggagag
ctgctggagcagagcagcaacaagctgcagaggctgggagagttggaaagatcctacgag
gacaaccagcgcatcctggaggagaaagctgcagagctggaacagatggagcggacggct
cgccgcatcctggaggaaatcagccacaaggtgacgctgtacagcacctgcctgtga
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integrated database retrieval system