KEGG   Oryzias latipes (Japanese medaka): 101165682
Entry
101165682         CDS       T02443                                 
Name
(RefSeq) laminin subunit beta-1
  KO
K05636  laminin, beta 1
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04510  Focal adhesion
ola04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:ola00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101165682
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101165682
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C Alanine_zipper Lipase_GDSL
Other DBs
NCBI-GeneID: 101165682
NCBI-ProteinID: XP_004083323
UniProt: H2MQD3
LinkDB
Position
23:complement(20565125..20592568)
AA seq 1778 aa
MLLLIFTFTAWALWCPVWTQEPEFADVCTEGSCYPATGDLLIGRAHKLSASSTCGVSQPT
RFCIVGHLEEEKKCFLCDSRQMYDEETNNISHTIENVVTTFAPNRLKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMMIERSMDFGKSWQIYRYFAYDCETSFPGISTGPM
VRVDDIICDTRYSDIEPSKEGEVIFRVLDPAYDIEDPYSLRIQNMLKITNLRVKFIKLHT
LGDNLLDSRDEVTEKYYYALYDMVVRGNCFCYGHASECAPMDGEPSGAEGMVHGRCMCNH
NTEGLNCERCQDFYQDLPWRPAQGKNTHACKRCDCNHHATSCHFDLAVFMMTGNVSGGVC
DNCQHNTMGRQCEQCARFFYQHPNRHLRDPNICEPCDCDPDGSVEGGNCDPRTDVAAGLI
SGQCRCKANVEGERCDNCRRGYYGLGKHPEGCLPCTCNQLGTMPGGAHCDSETGKCICKR
LVDGHNCDQCLPEHWGLSNDMDGCRPCDCDHGGAVHNNCDPDSGQCVCREHMFGRRCDQV
ESGFYFIDLDHYTYEAEDAKHGPGVAVVPRPYPLNRSPTWTGMGFVNVPEGAYLEFNVNN
IPESMDYDILIRYEPQLPQQWEQLVLRVERPVFNPPNRSGHCTNSIQSGDEQSISLSPGS
RHVLLVRPVCFEKGLNYTIRLTLPLYSTNSHVQNPYTLIDSLVLMPRVRELEMFHGTKGE
AEWDTFQRYRCLESSRNVIKSPMTDICKDYIFSVSALLHKGAMACQCDPQGSLSSVCESS
GGQCRCRPNVVGRNCDHCAPGTFLFSPAGCRPCNCDPLGSVRAFCHELTGQCECVRGATG
RQCSQCLPGFWGFPQCRMCQCNGHSDYCHPNTGECQGCRDFTTGHHCERCMNGYHGNPEL
GSGEHCRPCMCPDGPRSGRQFSDSCYLLADSDHLVCVCSSGYKGSRCDECAPGYYGNPLV
PGGRCMACQCNNNIDMHDPKSCDSRTGACLKCLYHTEGHACQHCKPGYYGNAATQSCTKC
MCSPFGTEQEACSSAEGCQCDRRSGQCPCQPNVVGQNCDHCAPDTWGISSGKGCQRCDCD
PVHSVGSSCDEVTGQCVCKPGFGGRTCRECKELFWGDPKVKCHACDCDPRGISSGQCHRA
TGHCACLESASGPRCDTCARGHWGEFPACEPCHRCFPVWDTVVSELANQTRRLQAQVTEL
HAIRVTAPYKDLISSLESNAKAVREILENKTASAKMEKIAEDSHQIIGLMSYLSGVMNST
EETLTFLQGDANMTEANLDALTAEADQLDANVQELRRLVHNIKNANIQGAMSTISAAHLE
STVAERRSTASTSGPGSPLQESAALRKTAGDKLSRSQRDFDRKNQRHTQKLEKLSKELEK
LNLTHLSEKTCGGAGEDAGCPPCGGLGCSGDDGQPRCGGEGCGGLLSASQTALTSAERLD
QQIRAAMREVDELSRMVWEANIRAKEAKERAVEAQQNSNRSKERVERSNQQLRGLITEIR
DLLSNDKADVSVIEAVANEVLALEMPASAEKLQELTREIREKVGTLTSVETILRQSAEDI
RAAESLLRRAKEASAKASDMKEEAQVVKGALEETERAQNTAMDAILLAQNNTRGTMDLLN
TVEQETAASELRLSNTTRRLVQLEREVGRLRQNGLRMNQLVDRAEQDSHQAKQEAELAEK
EFEDDVRDGFEEAQEQVEDQGAALLEARRRADELQREAGELLEQSSNKLQRLGELERSYE
DNQRILEEKAAELEQMERTARRILEEISHKVTLYSTCL
NT seq 5337 nt   +upstreamnt  +downstreamnt
atgttgcttctaatcttcactttcacagcttgggctctgtggtgccccgtctggactcag
gagccggagtttgcagacgtttgcacggagggcagctgctacccggccaccggtgacctt
ctgatcggtcgggcgcacaaactcagcgcctcctccacctgcggcgtgtctcaaccgact
cgcttctgcatcgtaggtcacctggaggaggagaagaaatgttttttgtgcgactcgagg
cagatgtacgacgaggagaccaacaacatcagtcacaccatagagaacgtggtcaccacc
ttcgcccccaaccgcctgaagacctggtggcagtccgagaacggcgtggagaatgttacc
atccagctggacctggaggctgagtttcatttcacacacctcatcatgaccttcaagacc
tttcgtcctgctgctatgatgattgaacggtccatggactttgggaaatcctggcagatc
taccgttactttgcctacgactgcgagacgtccttcccgggcatttccaccgggcctatg
gtcagagtggacgacatcatctgtgacacccgctactcagatatcgaaccatccaaagag
ggagaagtgatattccgagtgctggaccccgcgtatgacattgaagacccctacagtttg
aggatacagaacatgctgaagatcacaaacctgagagtgaagttcatcaaactccacacg
ctgggcgataatctgctggactcccgtgacgaggtgacagagaagtactactacgctctc
tacgacatggtggtccgaggaaactgcttctgctatggtcacgcctcggagtgcgccccc
atggacggagagccaagtggagctgaggggatggttcatggtcgctgtatgtgcaaccac
aatacggaagggttgaactgtgagcgctgccaggacttctatcaagatttaccctggagg
cctgcacaaggaaaaaacacacacgcctgcaaaaggtgtgattgtaaccatcacgccaca
tcgtgccactttgacctcgccgtgttcatgatgaccggcaacgtgagcgggggcgtgtgc
gacaactgtcagcacaacaccatgggccggcagtgcgagcagtgtgcgcgtttcttctac
cagcaccccaacagacacctgagagaccccaacatctgcgagccgtgcgactgtgacccg
gacggctcagtggagggtgggaattgtgaccctcgaactgatgtggcagcggggctgatc
tcaggtcagtgtcgctgcaaggccaacgtggaaggagagcgctgcgacaactgcaggcgg
ggctactacggcctgggaaaacaccccgagggctgcctgccatgtacctgtaaccagctg
ggaacgatgcctggaggagcccactgtgactcagagacggggaaatgcatctgcaaaagg
ctcgttgatggacacaactgtgatcagtgtctgccagagcactggggtctgtcaaatgac
atggatggatgcagaccatgtgactgcgatcatggtggggccgtccacaacaactgtgac
cccgactctggacagtgtgtgtgcagggagcacatgtttggacgccgctgcgaccaggtc
gagtctggtttttacttcatcgatctagatcattacacttacgaagcagaagatgccaag
catggacctggtgtggcagtggtaccaaggccttatcctctaaaccgaagccctacatgg
actgggatgggctttgttaatgtgccagaaggagcttatctagagttcaatgtcaacaac
atcccagaatccatggactacgacatccttatccgctacgagccacagcttccacagcag
tgggagcagctcgtcctccgggtggagcgtcctgttttcaatcccccaaaccgctctggt
cactgcaccaactctatccagagcggagacgagcaatccatctccttgtcacctggatcc
agacatgtgctgctggtgaggcctgtgtgctttgagaagggcctgaactacaccatccgc
ctcacactgccgctgtactcgacgaacagccacgtccaaaatccatacacactcattgac
tctctggtgctaatgcctcgagtcagggagcttgaaatgtttcatggaacaaagggcgaa
gcagagtgggatactttccagaggtaccgatgtctggagagcagcaggaacgtcattaaa
agccccatgaccgacatctgtaaagattacatctttagtgtttctgctttgctgcacaaa
ggagccatggcatgccagtgtgatcctcagggttccctcagcagtgtatgcgagtctagt
gggggtcagtgccggtgccggcctaacgtagttggcagaaactgtgaccactgcgctccg
gggaccttcttgttcagtcccgctggctgcaggccttgcaactgcgaccccctgggctcc
gtcagagctttctgccacgagttgaccgggcagtgcgaatgtgtccgaggagccactgga
cgccagtgttcccagtgtctgcccggcttctggggcttccctcagtgccgaatgtgccag
tgtaatggccacagcgactactgccaccccaacaccggggagtgccagggctgccgagac
ttcaccactggacaccactgtgagagatgcatgaacggttaccatggtaaccctgagctg
ggttcaggtgagcactgccgcccctgcatgtgtccggatgggccgcgcagtggcaggcag
ttctcagacagctgctacctcctggccgactcagaccatctggtgtgtgtgtgcagcagc
gggtacaaaggcagccgctgtgacgagtgcgctcctggttactatggaaaccctctggtt
cctgggggccgctgcatggcctgtcagtgcaacaacaacatcgacatgcacgaccccaag
tcctgcgactcccgaacgggcgcctgcctcaaatgcctctaccacactgagggccacgcc
tgccagcactgcaaaccgggttactatggcaacgctgccacacagagctgcacaaagtgc
atgtgttcgccctttggaacggaacaggaggcgtgttcctccgccgagggctgccagtgt
gaccggcgcagcggccagtgcccctgccagcccaatgtggtgggtcaaaactgcgaccac
tgtgccccagacacatggggcatcagcagcggaaagggctgccagcgctgtgactgcgac
cccgtccactctgtggggtcttcttgtgacgaggtcacgggacagtgcgtttgcaagcca
ggcttcggtgggaggacatgtcgggagtgcaaagagcttttctggggggatcctaaggtc
aaatgtcacgcttgtgactgcgacccccgtgggatctctagcggccagtgtcaccgcgcc
acgggacactgcgcctgcctggagagcgcgtccggcccacgctgcgacacgtgcgccagg
ggccactggggagagttcccagcctgcgagccctgccaccgctgctttcccgtgtgggac
actgtggtttcggagctggccaatcaaacgcggcgcctccaagcccaagtgactgagctc
cacgccatcagggtcacggcgccatacaaggatctgatcagcagcctggagagcaacgcc
aaggcggtccgagaaatcctggagaacaaaacggcttcagcgaagatggagaagatcgca
gaggattcccatcagatcattggactgatgtcctatctaagtggtgtgatgaattccacc
gaggagacgttgacttttctccaaggcgacgcaaacatgacagaagcgaacctggacgcc
ctgaccgccgaggccgaccagttggatgcaaacgtccaggaactgagacggctggtacac
aacatcaagaacgccaacatccaaggcgcgatgagcaccatctctgctgcacacctggag
tcgaccgtggcggagcgccgctccacagcctccaccagcggccccggaagcccactgcag
gagtccgctgcactacggaagaccgcgggggacaaacttagcagaagccagagagacttt
gaccggaaaaaccagagacacactcagaagctggagaaactgtccaaagagctggagaag
ctaaacctgactcacctcagtgaaaagacgtgcggtggtgcgggtgaagatgcgggatgc
ccgccctgcggcgggttgggctgcagcggggatgacggacagcctcgctgtggaggagaa
gggtgcggcggcctcctctccgcctctcaaaccgctttgacgtcagccgagaggctggac
cagcagatccgagcagctatgcgggaggtggacgagctctccaggatggtgtgggaagcc
aacatccgtgcgaaagaagccaaggagagggcggtggaggcgcagcagaactccaaccgc
agcaaagagagggtggagaggagcaaccagcagctgcgcggcctgatcacagagatccga
gacctgctcagcaacgacaaagcagacgtgtccgtgatcgaggcggtcgccaacgaggtg
ttggctctggagatgccggcctccgcagagaagctgcaagaactgacgagggagatccgg
gagaaggtcggcactctgaccagcgtggagaccatcctccgtcagagcgcggaggacatc
cgggctgctgagtcgctcctgaggcgggccaaagaggccagtgccaaggcttcagacatg
aaggaggaagcccaggtggtgaagggcgctctggaggagactgagcgcgctcagaacact
gcaatggacgccatcctgctggcccagaacaacaccagaggcaccatggacctgctgaac
acggtggagcaggagaccgccgcctccgagctgcggctcagcaacaccacccgccgcctg
gtgcagctggagagggaggtgggccggctcaggcagaacggcctccggatgaaccagctg
gtggacagggccgagcaggacagccatcaggccaagcaggaggcggagcttgcagagaag
gagttcgaagatgacgtgagagacggatttgaggaggcgcaggaacaggtggaggatcaa
ggggcagcgctgctggaggccaggaggagggcggatgagctgcagcgggaagctggagag
ctgctggagcagagcagcaacaagctgcagaggctgggagagttggaaagatcctacgag
gacaaccagcgcatcctggaggagaaagctgcagagctggaacagatggagcggacggct
cgccgcatcctggaggaaatcagccacaaggtgacgctgtacagcacctgcctgtga

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