Oryzias latipes (Japanese medaka): 101165760
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Entry
101165760 CDS
T02443
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCIP135
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ola01002
]
101165760 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101165760 (vcpip1)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101165760 (vcpip1)
Peptidases and inhibitors [BR:
ola01002
]
Cysteine peptidases
Family C64
101165760 (vcpip1)
Ubiquitin system [BR:
ola04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
101165760 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU1_UBXL
OTU
ubiquitin
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
101165760
NCBI-ProteinID:
XP_004078872
UniProt:
A0A3B3IAH5
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All DBs
Position
17:complement(10344460..10356496)
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AA seq
1168 aa
AA seq
DB search
MSLLPASKKKDKRILSGTCPDPKCQARLFFPAFGSVSIECTECGQRHEQKSLLNVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPVLTRYGMDKQTGKAQLLR
EMNQGEMFDCSLLGDRAFLIEPEHVATMGYGKDRSGSLIYLHDTLEEVKKANGSRECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQNFKQNLGRYKALFQDFIDAAEWEDII
NECDPLFIPPEGVPLGLRNIHIFGLANVLHRPIILLDSLVGMRSSGDYSATFLPGLVPEE
QCRGKDGKPNKPICIAWSSSSRNHYIPLVGIKNTVLPKLPAHLLPKAWGVPQELIKKYIR
LEPDGSCVIGGDRSLQDKYLMRLVNAMEEVFMEKHNIHPSLVADVHQYVYRRTGVIGVQP
EEVTEAAKKSVLEYRLHRCLICGALSELHVPSEWLVPGGKLYNLAKSTHGQLRPDKNYSF
PLNNIVCSYDPQRDALIPDYKLSGLNTCNWCHGTSVRHIRGNGSVVYLDGDRTNTRSQGG
KCGCGFKHYWEGKEYENLPEAFPITLEWGGRVVRETVYWFQYETEPALNSNVYDVAMKLV
TKHFPGEFGSEILVQKVVNTILHHTAKKNPGEYNPVSIDGAHVRRLTDTPESQQAPDPQP
PTKIILTGQKTKTLHKEELTMSRTERSIQQSISEQAFVSQKRLTDKLKGQGRAASPSGSP
EPSSSSAPSTPTKSSSPSSSSKEKKIRVTTSDGRQAMLTLQAHTTFSQLQESICNQFGVP
PSQQCIRFGFPPKELQPPKDGEENEPVALQHGDRVTVEILKGSEDKGPSTSVTRASSSQS
SLHSAKSEESVAPRMSGRELQDSIDLEMSSLCLLAALMGEDVWSYAKKLPHLFQQGGVFY
NIVKKDMGLMDGKHCTLPHLTGKTFVFNAAEDRLELCVDAAGHFPVGPEVEELVKEALVQ
LRSEAATRGSREGSPSHGLLRLGSGGVVRKKEHLQNVTAFQGKGHSLGSSESSSPPEHRP
ITRQHSSGVDLSASVSKGPPDLSDIPEDTTRELVRMAPGFVTMKDSRAVDPSLMEQQRKK
LQEMVSSIQASMERHLREQQSSAAAAGGGATQERTGRTETGSSQEKPPAHHSAGKATPGK
PERKTEDPEEMESQDADQSNPLEPMDHS
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttctgccagcctcaaagaaaaaagacaagcgaatcttgtccggtacctgcccg
gacccgaaatgtcaggcgcggctgttcttccccgctttcggttctgttagcattgagtgc
acggagtgcggccagcggcacgagcagaagagcctgctgaacgtggaggaggtgaccgat
ccagatgtcgtgctgcacaatctgctcagaaacgccctgctcggcgtcaccggggccccg
aagaaggggaccgagctggtgaaggtgatggggctctccaactatcactgcaagctcctg
tccccggtcctcaccaggtacgggatggacaagcagaccggcaaagcccagctgctcaga
gagatgaaccagggggagatgttcgactgctccctgctgggggacagagccttcctgatc
gagccggagcatgtggccaccatgggctacgggaaggaccggtccgggagcctcatctac
ctgcacgacactctggaggaggtgaagaaggcaaacggcagcagggagtgtctgatcccg
gtgcacgtggatggagacggccactgcctggtccacgctgtgtccagagcgctggtaggc
agagaactgttctggcatgctctgagagagaacctcaagcagaacttcaaacagaacctg
ggtcgctacaaagccttatttcaggattttattgatgctgcagagtgggaggacatcatc
aatgagtgcgacccgcttttcatcccccctgaaggagtgcctctgggcctgcgcaacatc
cacatatttggtttagctaacgtcctccatcggcccataatccttttggactctctggtt
gggatgaggagctccggagactattccgccaccttcctgcccgggttggtaccggaggag
cagtgcagggggaaggacgggaagcccaacaaacccatatgcattgcctggagcagctcc
agccggaaccactacatccctctggtgggaatcaagaacacggtgctacccaaactgcct
gctcacctgctgccgaaggcctggggcgtccctcaggaactcatcaaaaagtacatccgt
ctggagcccgacgggagctgtgtgatcggcggcgaccgcagcctgcaggacaaatacctg
atgaggctggtcaacgccatggaggaggtgttcatggagaagcacaacatccacccgtcc
ctggtggctgacgtgcaccagtatgtctacagaaggaccggggtgatcggcgtccagcct
gaggaagtgacggaagcagccaaaaagtcagtgttggagtatcggttgcaccgctgtctg
atctgcggcgccctctctgagctccacgtcccgtcggagtggctcgttcccggcgggaag
ctctacaacctcgccaagtccacgcacggtcagctgcggcccgacaagaactacagcttt
cctctgaacaacatagtctgctcctacgacccccagagggacgccctgatcccagactac
aagctgagtggcctcaacacctgcaactggtgtcacggcacctcggtgcgccacatccgt
ggaaacggatctgtggtttacctagacggggacaggacgaacacccgctcccagggtggg
aaatgtgggtgtggcttcaaacattactgggaggggaaggagtacgaaaatctgccagaa
gcgttccccatcacgctggagtgggggggtcgggtggtgcgggagacggtctattggttc
cagtacgagaccgagccggcgttgaacagcaacgtgtacgacgtggccatgaagctggtc
accaaacacttccccggggagttcggcagcgagatcctggtgcagaaggtggtcaacacc
atcctgcatcacaccgccaagaaaaacccaggcgagtacaacccggtgtctatcgatggg
gctcacgtccgacgccttaccgacaccccagagagccagcaggcgccggatcctcagccg
cccacaaaaatcatcctgacgggtcagaaaacaaagaccctccacaaggaggagctgacc
atgagccggacggagcgcagcattcagcagagcatcagtgagcaagcctttgtctcccag
aagcggctaaccgacaaactgaagggtcagggccgggcggcgtcacccagcggttcaccg
gaaccctcctcctcctcagctccatccacccccaccaagtcctcttccccgtcctcgtcc
agcaaggagaagaagatccgtgtgaccaccagtgatggcaggcaggccatgctgaccctg
caggcccacaccaccttctcccagctgcaggagagcatctgcaaccagtttggggtcccc
ccctcacagcagtgcatccgcttcggcttcccgcccaaagagctgcaacccccaaaggac
ggggaggagaacgaaccggtggcgctgcagcacggggacagggtgacggttgagatcctg
aagggctcggaggataagggcccatccacctcggtgaccagagcatccagctctcagtcc
agcctgcactcggcgaagagcgaggagtcggtggcgcccaggatgagcggccgcgagctt
caggacagcatcgacctggagatgtcgtccctctgcctgctggcagctctgatgggggaa
gatgtttggtcgtacgcaaagaagctgccgcacctcttccagcagggcggcgtgttctac
aatatcgtcaaaaaggacatgggtctgatggacgggaaacactgcacgctgccgcacctg
acggggaagaccttcgtgttcaacgctgctgaggaccgcctggagctctgtgtggacgct
gcgggacacttccccgtgggcccagaagtggaggagctggtgaaggaggccttggtgcag
ttgcgctctgaggcggccaccaggggcagcagagaggggagcccgtcccacggcttgctg
cgtctgggtagcggcggcgtggtccggaaaaaggaacatctgcaaaacgtcactgctttt
caggggaaaggtcactcactggggagctctgaaagctcctcccctccagaacacagacct
atcacacggcagcacagcagcggggtggatctgagcgccagtgtgtccaaaggacccccc
gacctgtcggatatcccagaggacaccaccagggagctggtccgcatggcgccgggcttc
gtcaccatgaaggacagtcgcgccgtggaccccagcctgatggagcagcagaggaagaag
ctgcaggagatggtctcctccatccaggcctccatggagcgccacctcagagagcagcag
agctctgcggccgctgcagggggcggggccacccaggagcggacagggaggactgagacg
ggcagtagccaggagaaaccccccgcccatcattcagcaggaaaggccacgcctggaaaa
ccagagcggaaaacggaggacccagaggagatggagagtcaggatgctgaccagagcaat
cctttggagcccatggaccactcctga
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