Oryzias latipes (Japanese medaka): 101165771
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Entry
101165771 CDS
T02443
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101165771 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ola03032
]
101165771 (pola1)
Enzymes [BR:
ola01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101165771 (pola1)
DNA replication proteins [BR:
ola03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
101165771 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
101165771
NCBI-ProteinID:
XP_004081285
UniProt:
A0A3B3IMG2
LinkDB
All DBs
Position
20:complement(15120874..15183242)
Genome browser
AA seq
1460 aa
AA seq
DB search
MSPVSNPEKDVDAAGSDDGGDGCSLAKSRSRREKREKVGRKSALEQLKKAKMGEKIKYKV
EEFSHVYEEVDEEQYSKLVQERQEDDWIIDDDGTGYVEDGREIFDDDLDDDVVEKRGKGG
AKGAESKKTVKKAAVTKPNTIKSLFMNSNVKKPAEKDIDLSKDDLLGDILQDLHSEKPAV
LAPPPVITLKKKKSLGSPMNPFSIRHQMPKESPMTGLKAKTVRPPPAELRPPACPSPPLE
KSSEKVEKPKEEEEENDSLALDEVDFDEPMETEPEIKEETEAEAAPSVPKVEPKKEPLSP
APLPSRVGGHWGQEEETGASDVPAEVHVDSSQLPLVEGEDGEPAFRFYWLDAFEDPYNQP
GVVYLFGKVWIQSAKSHVSCCVTVKNIERTIYLLPREYKTNPKTGEVSGEPVGMMDVYQE
FSELSEKFKVMKFKSKKVEKNYAFEIPDVPNQCEYLQIQYSAEFPALPPDLKGATFSHIF
GTNTSSLEHFLLSRKIKGPCWLDIKTPQMMHQPVSWCKVEVLALRGDTISLVKDLPPPPL
TVMSISLKTVQNPKTHHNEIVSLAALLHYGFHMDKAPPQTPYQNYFCVISKPADCIFPYD
FKEALRKKNGKVEIASTERTLLGFFLAKMHKIDPDVLVGHDIFGFDLEVLLQRINVCKVP
HWSKIGRLRRANMPKLGGRGLFAEKNATCGRLVCDVEISAKELIRCKSYHLTELAAQVLK
VERVTVPQEEVKNLYSDSPHLLYLLELTWTDAKLILQIMCELNVLPLALQITNIAGNVLS
RTLMGGRSERNEYLLLHAFHDKNYIVPDKPSFKKAQLEMGDGEEDVDAGKGKRKKKAAYS
GGLVLDPKVGFYDQFVLLLDFNSLYPSIIQEFNICFTTVQREAQNSRRKREEDESEEIPE
IPDPGLEMGILPKEIRKLVERRKQVKQLMKQQDINPDLYMQYDIRQKALKLTANSMYGCL
GFSFSRFYAKPLAALVTHKGREILMHTKDMVQKMNLEVIYGDTDSIMINTNSKSLEEVFK
LGNKVKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEHHGDGRYSVKQELKGLDIV
RRDWCDLAKECGNYVIGQILSDQSRDIIVENIQKHLVEVGERVANGDIPLNLYEIHKALT
KDPQDYPDKKSLPHVHVALWINSQGGRRVKAGDTISYLICKDGSTLAASQRAYALEQLQK
QEGLSVDTQYYLAQQIHPVVSRICEPIEGIDGVLIATWLGLDPSHFRSHQQHQREEEADG
MLGAPVQLTDEERYRDCERFTFTCPSCGTDNIYDNVFEGAGNKVEPGLMRCCHIPCQSRP
IDHPVHISNKLLLDIRRHIKKYYSGWLVCEDQACQNRTRRLPIAFSRHGPICPACSRATL
RPEYSEKALYNQLCFYRFIFDWEHAFSKVLTQEERLLVNQMKMQKEVYRKLKEVPEKALA
ASGYSEVNLAKLFQAFSSLK
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgtctccagtttcaaacccagagaaagacgtggacgctgcgggaagtgatgatggcggc
gatggctgcagcctggccaaatctcgctccaggcgagagaagagggagaaggtcggcagg
aagtccgctttggagcaactaaagaaagccaagatgggagagaagatcaaatacaaggtg
gaggagtttagtcatgtgtacgaggaggtggatgaggagcagtactccaagttggtacaa
gaaaggcaggaagacgactggattatcgacgatgatggtacgggatatgtggaggacgga
cgagaaattttcgatgacgatttggacgacgacgtggtggaaaaacggggaaaagggggc
gcaaagggagcggagtccaagaaaactgtgaagaaagctgcagtaaccaaacccaacacc
ataaagagccttttcatgaacagtaatgtgaaaaagcctgctgagaaagatattgattta
tccaaagacgacctgttaggagatattctgcaggacctgcactctgagaaaccagcggtt
ctggctcctcccccagtgatcacgctgaagaagaagaagtctttgggttcacccatgaac
cccttctccatcagacatcagatgcctaaggagtctccgatgacggggttaaaggctaaa
accgtccgtcctccacctgcagagctcagaccgccggcctgcccgtctccccctctggaa
aaaagcagtgaaaaggtggaaaaaccaaaagaagaagaagaagagaacgactcactggca
ttagacgaggtggattttgatgaaccgatggagacggagcctgagatcaaagaggagaca
gaagctgaagcagcaccctcagtgcctaaagttgagccaaagaaggagcccctgagtcca
gccccccttccctccagagttgggggtcattggggtcaagaggaggagactggagcgagt
gacgtccccgcagaagtgcatgtggactccagccagctgccgttggtggagggtgaggac
ggagagccggcctttcgcttttattggctggacgcctttgaagacccttacaaccaaccg
ggtgtggtctacctgtttgggaaagtgtggattcagtcggcaaagtctcacgtgagctgc
tgcgtcaccgtcaagaacatcgagcggacaatttaccttctacctcgtgaatacaaaacc
aaccccaaaaccggcgaagtgtctggcgagcctgtaggaatgatggacgtttaccaagaa
ttcagcgagctctctgagaaatttaaggtcatgaagttcaaatcaaagaaagtggagaag
aactacgcttttgaaattcctgatgttcccaatcagtgcgaatacctgcagatccaatac
tctgccgagtttccagctctgccgcccgacctgaagggggcgaccttctcccacattttt
ggaacgaacacctccagtctggagcactttctcctcagcaggaaaattaaaggcccctgc
tggttggatatcaagacaccacagatgatgcaccagccggtcagctggtgtaaggtggag
gtcctggctctgaggggcgacaccatttctttagtcaaagacctgccacctccgccgctc
acggtcatgtccatcagcctcaagactgtgcagaacccaaagacgcaccacaacgagatt
gtgtccctcgctgccctccttcactacggcttccacatggacaaagctcctcctcagact
ccgtatcagaactatttctgtgtgatcagtaaaccagcagactgcattttcccgtacgac
ttcaaagaggctctaaggaagaagaacgggaaggtggagatcgcttccacggagcggact
ctactcggcttctttttggccaaaatgcacaagatcgaccccgatgtgctggtgggtcac
gacatctttggttttgatctggaagttctcctgcagaggatcaatgtgtgcaaagttccc
cactggtctaaaatagggcgtctcagaagagccaacatgcccaaattagggggtcgaggt
ctcttcgcggagaagaatgcaacctgcggccgtctggtgtgtgatgtggagatctccgcc
aaagagctgattcgctgcaaaagttaccacctgactgagctggccgctcaggtgctgaag
gtggagagagtcaccgtcccccaggaggaggtcaagaatctgtacagcgactctcctcac
ctgctgtacctgctggagttgacgtggaccgacgccaagctgatcctccagattatgtgc
gagctcaatgtgcttcctctcgccctgcagatcaccaacatcgccggaaatgtcctgtct
cgcacgctgatgggtggccgttcagagaggaacgaatacctgctgcttcatgcattccac
gacaagaactacattgtccccgacaaaccgtcctttaaaaaagcacagctggagatgggt
gatggagaggaggatgtggatgcaggaaaagggaaaaggaagaagaaggcagcatattct
ggaggtctggttctggaccccaaagtgggtttctacgatcagtttgtgctccttctagac
ttcaacagcttgtatccctccatcatccaggagtttaacatctgcttcaccaccgtgcag
agggaggctcagaactcccgcaggaagagggaggaagatgaatcagaagaaattccagag
attccagatcccggcctggaaatgggaattctccctaaagaaatcaggaaactggttgaa
cggcgtaaacaggtcaaacagctgatgaagcagcaggacatcaacccggatctgtacatg
cagtatgacatccgtcagaaggccctgaagttgacggccaacagcatgtacggctgcctg
ggattcagctttagccgcttctatgcaaagccgctggctgctctggtgacgcacaaaggc
agagagatcctgatgcacaccaaagacatggttcagaagatgaacctggaagtcatttat
ggagatactgactccatcatgatcaacaccaacagcaagtcgctagaagaagttttcaaa
cttggaaataaggtgaaggcagaagtgaacaagctgtacaaactcttggagatcgacatc
gacggggtgtttaagtcacttctgctgctcaagaagaagaaatatgcagcactggtggtg
gagcaccatggcgatggacggtacagcgtgaagcaagaactcaaaggcttggacattgtc
cgcagagattggtgcgacctggccaaggaatgtggcaattatgtgattggtcagatcttg
tccgaccagagtcgtgacattattgtggagaacatccagaagcacctggtggaagtggga
gagcgggtcgccaatggagacatacccctgaacctgtatgaaatacacaaggccttgaca
aaggatcctcaagactacccagacaagaaaagccttcctcatgtccacgttgctctatgg
atcaactctcagggcggacgaagagtcaaagccggagatacgatctcttacctcatctgc
aaggatggttccacgctagcagccagtcagagggcttatgctctggagcagctgcagaaa
caagagggtctcagtgtggacacgcagtactacctggcccagcagatccacccggtggtg
tcccgcatctgtgagcccattgagggcatcgacggcgtgctcatagcaacgtggctgggt
ctggacccgagtcatttccgatcccaccagcagcatcagagggaggaggaggcggacggc
atgctgggagctcccgtccagctgacagacgaggagcgctacagagactgtgagaggttt
accttcacctgcccttcatgtggcaccgacaacatctatgacaacgtcttcgagggagct
ggtaataaggtggagcccggtttgatgcggtgctgtcatattccctgtcagagtcgcccc
atcgaccacccggttcacatcagcaacaaactcctactggacatccggcgccacattaag
aaatactactcaggctggttggtgtgtgaggaccaagcctgccagaacaggaccaggcgt
ttgcccatcgccttttcccgccacggccccatctgccccgcctgctccagagcaacactc
aggcctgagtactccgagaaggccctgtacaaccagctctgcttctacagattcatcttt
gactgggagcacgccttttccaaagtgctgactcaggaggagagactgctggtgaaccag
atgaaaatgcagaaggaggtgtatcggaagctgaaggaggtgccagaaaaggccttggcg
gccagcgggtactcagaggtcaacctggccaaacttttccaagcattctcctccctcaag
taa
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