Oryzias latipes (Japanese medaka): 101165780 Help Entry 101165780         CDS       T02443                                  Symbol fdft1 Name (RefSeq) squalene synthase   KO K00801   farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] Organism ola  Oryzias latipes (Japanese medaka) Pathway ola00100   Steroid biosynthesis ola01100   Metabolic pathways Module ola_M00101   Cholesterol biosynthesis, FPP => cholesterol Brite KEGG Orthology (KO) [BR:ola00001]  09100 Metabolism   09103 Lipid metabolism    00100 Steroid biosynthesis     101165780 (fdft1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:ola01006]     101165780 (fdft1) Enzymes [BR:ola01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.21  squalene synthase      101165780 (fdft1) Prenyltransferases [BR:ola01006]  Terpene biosynthesis   Squalene/phytoene synthase    101165780 (fdft1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SQS_PSY Motif Other DBs NCBI-GeneID:  101165780 NCBI-ProteinID:  XP_004083804 UniProt:  A0A3P9LLH7 H2MSH7 LinkDB All DBs Position 24:complement(16914678..16919378) Genome browser AA seq 412 aa AA seqDB search MDILKSLGHPEEIFNLFRFKMGGCRAVMPKLDYDSMSQTLRTCYVYLNQTSRSFAAVIQA LDGELRHAVCIFYLVLRALDTVEDDMTIPLDKKVPMLTHFHTYLYQEDWCFTESQEKDRQ VLADFPTISLEFRNLALVYREVISDICHHMGVGMAEFLEKKVGSMKEWDQYCHYVAGLVG IGLSRLFSASQLEDPEVGQDTELANSMGLFLQKTNIIRDYLEDTKEGRAFWPQEAWSQFA GRLEDLAQPDKLESALSCLNLLVTDALRHVPDVIAYLSRLHNQSVFNFCAIPQVMAIATL SSCYNNPMVFQGVVKIRKGQAVTLMMEATNMQAVQTIIFQYSQEILQKVSLTDPSRDKTL HILAVIQGKSTMSQSRTHHLSPMYLSAAMLLAVLSWQYISTAAAQAQGTGDV NT seq 1239 nt NT seq  +upstreamnt  +downstreamnt atggacatcttgaagtctctgggacatccggaggagatttttaaccttttccggtttaaa atggggggatgtagagctgtcatgccgaagttggattatgactccatgagccagactttg cggacgtgctacgtttatctgaaccagaccagccggagcttcgcggctgtgatccaggcg ctggacggggagctgagacatgcggtttgcatcttctacctggtgctgcgggcgctggac actgtggaggatgacatgaccatccccctggacaagaaggtgcccatgctgactcatttt cacacctatctgtaccaagaggattggtgcttcactgagagtcaggagaaggatcgacag gttcttgcagacttccctacgatatctctggagttccgaaacctcgctctggtatacaga gaggtcatctcggatatctgtcaccatatgggagtcgggatggccgagtttctggagaag aaggtgggatccatgaaggagtgggaccagtactgccactacgttgccggtctagtcggc atcggtttgtctcggctcttctcagcctcccagctggaggatccggaagttgggcaggac acagagctggccaactctatgggcctgttcctccagaagaccaacatcatcagagactat cttgaagacacaaaagagggtcgggccttctggccccaagaggcgtggagtcagtttgca ggccgcctggaggatctcgctcagccagacaagctggagtcagctctgtcctgtctcaac cttctggtcaccgacgctctgcggcacgtgcccgacgtcatcgcctacctgtctcgcctg cacaaccagagtgtctttaacttctgtgccattccacaggtgatggcaatagctactctt tcatcgtgctacaacaaccccatggtgtttcagggagtggtgaagatcagaaaggggcag gctgtcactctcatgatggaagcgactaacatgcaagctgtgcagaccatcatctttcag tatagtcaggagatcctgcagaaggtctccctcactgacccatccagagacaagactctg cacattctggctgtcatccagggaaagtccaccatgtcccagtccaggacccaccacctg tctccaatgtacctgtctgctgccatgctgctggctgtgctcagctggcagtacatcagt accgctgcagcccaggcgcagggcacaggagacgtgtag

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