KEGG   Oryzias latipes (Japanese medaka): 101165784
Entry
101165784         CDS       T02443                                 
Symbol
cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101165784 (cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ola03041]
    101165784 (cdc5l)
   03400 DNA repair and recombination proteins [BR:ola03400]
    101165784 (cdc5l)
Spliceosome [BR:ola03041]
 Complex B
  Other components
   Prp19 complex
    101165784 (cdc5l)
 Complex C
   Prp19-CDC5 complex
    101165784 (cdc5l)
DNA repair and recombination proteins [BR:ola03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    101165784 (cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 Rap1_C VIGSSK
Other DBs
NCBI-GeneID: 101165784
NCBI-ProteinID: XP_004084717
UniProt: H2MWI0
LinkDB
Position
15:complement(1348300..1357513)
AA seq 812 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAQRDNEEEVGDDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIAVARKRKKKRGVDYNAEIPFEKKPAPGFYDTSMENYEALEPNFK
RLRQQHLDGELRNEREERDRKKDKQKIKKKKESDLPSAILQTSGVAEFTKKRSKLVLPAP
QISDAELEEVVKLGVASEVARQAAEESESGNSASSALLSEYNITNNMAAGLRTPRTPAAQ
DRIMQEAQNLMALTNIDTPLKGGLNTPLHESDFSGVTPQRQQIQTPNTVLSTPFRTPGPG
QTSDGMTPQAGGAVTPRGLGTPGLTPGRTPLRDKLNINTDEQATDPTFAKHTQKESLQQL
RQGLMSLPAPKNDFEIVLPENAEKELEEMEAETGFVEDSADIEARKQAQRDAQREKELKL
RHTPVQRNLPRPSEVNESVLRPASMEPPSDLQMAEELVKQEMITMLHYDCLHHPTANATN
PLQRGKAKGPASTSNNASHIAYLEAHTYKPVSPEDMEQAKAILAAEMEVVKAGMGHGDLS
LEAYSQVWEECYGQVLYLPAQNRYTRANLASKKDRIESLEKKLEVNRSHMTADARRAAKL
EKKLKILLGGFQSRALGLLKQHNELWEQVEQAATELQTFAQLKKQEDTAIPRRQAALRED
VERQMEREKELQQRYGELLMEREALLNTSQKF
NT seq 2439 nt   +upstreamnt  +downstreamnt
atgcctcgtattatgataaaaggaggggtttggcgtaacactgaggatgagatcctcaag
gcggcggtaatgaaatatgggaaaaaccagtggtcccgcatcgcctccctgctgcaccgc
aagtctgccaaacagtgcaaagccagatggtacgagtggttggaccccagcattaagaaa
acggagtggtccagagaggaggaggagaagctgcttcatctggccaagctgatgccgacg
cagtggaggaccatcgctcccatcataggacgtactgctgcccagtgtctggagcactac
gagtacctgctagacaaagctgcacagagagacaatgaggaagaggtgggagatgatccg
aggaagttgaaaccaggagagatcgacccaaatcctgagaccaaacctgccagaccggac
cccgtggacatggacgaagacgagctggagatgctgtctgaagccagggctcgcctggcc
aacacacagggcaagaaagccaagaggaaggccagagagaaacagctggaggaggccagg
cgtttggctgccctgcagaaacgcagggagctgagagcagcaggaattgctgttgcgagg
aagaggaagaagaagcgaggagtggactacaatgctgaaatcccgtttgaaaagaagccc
gctccgggtttctatgacaccagcatggaaaattacgaagcgctggagcccaacttcaaa
cggctgcgacagcagcacctggatggagaactacgcaatgagcgtgaagagagggaccgg
aagaaagacaaacagaaaataaagaagaagaaggagagcgacctgccatctgccatcctt
cagaccagcggcgtggcagagttcaccaagaaacgctccaagctagtgctacctgcacct
cagatcagtgatgctgagctggaggaagtggtcaaactgggtgtggccagtgaagtggca
cgccaggctgccgaggagagtgaaagtggaaactccgcctcctccgcccttttgtcagag
tacaacatcacaaacaacatggctgccggactgcggacccctcgcacccctgcggctcag
gacaggataatgcaggaagcccagaacctgatggctctgaccaacattgacacccctctg
aagggggggctcaacacgcctctgcacgaaagcgacttcagcggagtgacgccccagcgg
cagcagatccagacgcccaacacggtcctcagcacgccgttcagaacccccggacccggt
cagacctcggatggcatgaccccccaggccggcggggcagtgaccccgcgagggctgggt
acgccaggactgactccggggcgcacgccgctgagagataagctgaacatcaatacagat
gagcaggcgacggatcccacgttcgccaaacacacgcaaaaggaaagcttgcagcagctc
aggcagggtctgatgtcacttcctgctccgaaaaacgactttgagatcgttcttccggaa
aacgcagagaaagagcttgaagaaatggaggcggagactggatttgtggaagactcggcg
gacattgaagcgcgaaagcaggctcagcgagacgcccagagagagaaggagctgaagctg
cggcacacgcccgttcagaggaacctgccgaggccgtcagaggtcaacgagtccgtcctc
cggcccgcctccatggagccgccgtctgacctacagatggctgaggaactggtcaaacag
gaaatgatcaccatgctgcattacgactgcctccatcatccgacggctaacgcaacaaac
cctctgcagcgcggcaaagccaaaggccccgcctccacctcaaacaacgcttcacacatt
gcttacctggaagcacacacctacaagcctgtcagccccgaggacatggaacaggcgaag
gccatcctggcggcagaaatggaggtggtgaaggctggaatgggtcatggcgacctcagc
ttggaggcctacagccaggtgtgggaggaatgctacggacaggtgttgtacctgccggct
cagaacaggtacaccagagccaacctggcctccaagaaggatcgcatagaaagcctggag
aagaagctggaggtgaaccgcagtcacatgacggcagacgctcgcagagccgctaaactg
gagaagaaactgaaaatcctgctgggggggtttcagtccagagcgcttgggctcctcaag
cagcacaatgaattatgggagcaggtggagcaggcagcaactgaactgcagacgtttgct
cagctgaagaagcaggaggacacagccattcccaggagacaagcggctctgcgggaggat
gtggagcggcagatggagagggagaaagagctgcagcagaggtacggcgagctgctgatg
gagagggaggctctgctcaacacctcccagaagttctga

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