Oryzias latipes (Japanese medaka): 101165800
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Entry
101165800 CDS
T02443
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ola04030
]
101165800
G protein-coupled receptors [BR:
ola04030
]
Rhodopsin family
Vision
Opsin
101165800
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
MpPF26
Cytochrom_B_N_2
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
101165800
NCBI-ProteinID:
XP_004069142
UniProt:
H2MGD1
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Position
5:26391083..26392928
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AA seq
357 aa
AA seq
DB search
MAEEWGKQVFAARRHNEDTTRGSAFTYTNSNHTRDPFEGPNYHIAPRWVYNVATVWMFFV
VVLSVFTNGLVLVATAKFKKLRHPLNWILVNLAIADLGETVFASTISVCNQFFGYFILGH
PMCVFEGYVVSTCGIAALWSLTIISWERWVVVCKPFGNVKFDAKWAIGGIVFSWVWSAVW
CAPPVFGWSRYWPHGLKTSCGPDVFSGSDDPGVQSYMIVLMITCCIIPLAIIILCYLAVW
LAIRAVAMQQKESESTQKAEREVSRMVVVMIVAYCVCWGPYTFFACFAAANPGYAFHPLA
AAMPAYFAKSATIYNPVIYVFMNRQFRTCIMQLFGKQVDDGSEVSTSKTEVSSVAPA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggagtggggaaaacaggtttttgctgcgaggcgacacaatgaagacacaaca
agaggctctgcttttacttacacaaacagcaatcacacccgagatccctttgagggtcct
aactaccacattgctcctcgatgggtctacaacgttgccacagtttggatgttttttgtg
gtggttctgtccgtcttcaccaacggcctggtcttggtggccacagcaaagttcaagaaa
ctgcgccacccactaaactggattttggtcaatcttgccatagctgacctgggagagacg
gtgtttgccagcaccattagtgtgtgtaaccagttctttggttacttcattctgggacac
cccatgtgcgtgtttgagggctatgtggtctccacttgtggtattgctgctctttggtct
ctgaccataatctcctgggaaagatgggtagtcgtgtgcaaaccttttggaaatgtcaag
tttgatgccaagtgggccattggtggaatcgtcttctcctgggtctggtctgcagtttgg
tgtgctcctcccgtctttggatggagcaggtactggcctcatggactaaaaacctcctgt
ggacctgatgtgttcagtggaagcgatgaccctggagtgcagtcctacatgattgttctg
atgatcacatgctgcatcattcccctggccatcatcatcctgtgttaccttgctgtctgg
ctggcaatccgagctgttgcaatgcagcagaaggaatcagagtcaacccagaaggctgaa
agagaagtgtccaggatggtggtggtcatgatcgttgcttactgtgtgtgctggggaccc
tacacctttttcgcctgctttgctgcagccaaccccggatatgccttccatcctctggct
gctgccatgcctgcctattttgcaaagagcgccacaatctacaaccccgtcatctatgtc
ttcatgaacagacagttccgcacatgcatcatgcagctctttggcaaacaggtggatgat
ggttctgaagtttctacatcaaagacagaggtctcctctgtggctcctgcataa
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