Oryzias latipes (Japanese medaka): 101165827
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Entry
101165827 CDS
T02443
Symbol
samd4b
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101165827 (samd4b)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101165827 (samd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
101165827
NCBI-ProteinID:
XP_023817071
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All DBs
Position
13:11078460..11089820
Genome browser
AA seq
671 aa
AA seq
DB search
MMFRDQVGILTDWFKSWNECEQTVALLSLLKRASRTQARFLHICLEHWLADCTEIHILEA
EANNAAIVSQWHQEPKEKVVSLLLSHLPLLQPRNSEAKCEYMKLLQKVLSHTIESSLFVE
ESRQLLSYALIHPATTLDDRTSLAMWLNHLEEHLSGGYPPRPPSSPYHPRQGSDEWPSSA
EALDPGNAWHDKSPSSSTSPAGQNGHMPFPGGMSSPINSNNTGVVGHLQPSPLKKSMSNI
PSSPQACGSEWLSQDDIGGRQNFIPTDHAPLSPQSSVASSGSEQTEEQGSARNTFQEDGS
GMKDVPAWLKSLRLHKYASLFSQMTYEEMMILTEQHLESQNVTKGARHKIALSIQKLRER
QSVLRSLEKDILEGGNMRNALQELQQIIITPIKAYTPPSAAQPATDSASSPSEIPKTGAE
KESVSEAFQSHSTPPCDGESSATPISDGDIAGQFTRVMGKVCTQLLVSRPDEENISCYLQ
LIEKSLSHEAFSETHKKRLVSWKQQVLKLLRLFPRKAMLDMPAYRQKGWNYGSNSLPTAG
SVSGGVGRRGQRQFQMTPRGLPAGRICLPGGIGGASPRHTLTNPALAGQGRQSLWFANPG
GSNSMPSQSRSSVQRTHSLPVHTSPQTMLMFQQQECQVPGADLEINPTLESLCLSMTEHA
LGDGTDRTSTI
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaggtgggcatcctcacagattggttcaaaagttggaacgagtgt
gaacagacagtggcactcctgtccctcctgaagagggcatctcgcacccaagctcgcttc
ctacacatctgtctggaacactggctggcagactgcacagagatccacatccttgaagct
gaagccaacaatgcagcaattgtcagccagtggcatcaggagccaaaagagaaagtggtg
tctctcttgttgtctcacttgccgctgttgcagccacgcaacagtgaggccaaatgtgag
tacatgaaactgctccagaaggttttgagtcacaccatcgaaagtagcctattcgtggaa
gaaagccgacagctgctctcttacgcactcatccaccccgccacaacactggatgatcgc
acctcactggccatgtggctcaaccacctggaggaacatctttctggtggctatccgcct
cggcccccatccagcccatatcacccacggcaaggctcagatgaatggccgagctcagct
gaggctctagacccagggaatgcatggcacgataagtccccgtcatccagcacatctcct
gcaggccagaatggacatatgccttttccaggcgggatgtcctcacccattaacagcaat
aatacaggtgtggtggggcatttgcagcctagccctctgaaaaagtccatgtccaatatt
ccttccagtccccaggcttgtggctcggaatggttgagccaggatgatatagggggccga
cagaacttcatcccaacagaccatgcaccactttcgccccagagcagtgtagcttcctca
ggcagcgaacagacagaggagcagggctcagctcgcaacaccttccaggaagacggcagt
ggcatgaaagatgtccctgcatggttgaagagtctccgccttcataaatatgcatcacta
ttctcacaaatgacctacgaagagatgatgatcctcacagagcaacatctggagtctcag
aatgtcacaaaaggagcgcgacataagatcgccttgagtatccagaaactgcgagaacgg
caaagcgtactcaggtctttagaaaaggatattttggaaggggggaacatgcgcaacgct
cttcaagagctgcaacaaatcatcatcacacccattaaggcctacaccccgcccagtgca
gcacagcccgcaacagattctgcaagctccccatctgaaatcccaaaaacgggagcagag
aaagagtcggtgtcagaggccttccagtcccacagcacgcccccctgtgatggagagtct
tcagccacgcccatttcagacggtgacatcgctggacagttcacccgtgtcatggggaaa
gtgtgcacacagctgttggtgtccaggccagatgaggaaaatattagctgttaccttcag
cttattgaaaaaagtttgtcacatgaggcgttcagtgaaactcacaagaaaaggctggtg
tcctggaagcagcaggtcctcaagctgctgcgcttgtttccccgcaaagcaatgctggac
atgccagcataccgacagaaaggttggaactatgggtcaaactccctccccacagcaggc
tctgtgagcggaggcgttggaaggcggggccaaaggcagtttcaaatgacccctcgaggc
ctcccagctgggcggatatgtcttcccggtgggattggaggagcatctccacgccacact
ctcaccaatcctgcgctggctggccagggtagacaaagcctgtggtttgccaaccccggg
ggaagtaacagcatgccaagtcagagtcgcagctctgtgcagcggacccactcacttcct
gtccatacgtccccacaaaccatgctcatgttccagcagcaagaatgccaagttccaggt
gctgacctggagatcaaccctacgctggagtcactgtgcctcagtatgacagagcatgcc
ttaggagatggaacagaccggacatcaacaatatga
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