Oryzias latipes (Japanese medaka): 101165871
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Entry
101165871 CDS
T02443
Symbol
tp53bp1
Name
(RefSeq) TP53-binding protein 1 isoform X5
KO
K20915
tumor suppressor p53-binding protein 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101165871 (tp53bp1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
Tudor_5
RTT107_BRCT_5
Tudor_3
DUF4537
BRCT
SH3_Hsr9
Tudor_2
Motif
Other DBs
NCBI-GeneID:
101165871
NCBI-ProteinID:
XP_011485051
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All DBs
Position
3:4151240..4181980
Genome browser
AA seq
1464 aa
AA seq
DB search
MDPSGSDLDSSLPQPENPCLIVEDSQPDSVALEDDPESSYRALLARRLSILQPASRSPVL
ELISSPLGSRSSQTDSQSTSDTDRQPCGAVSGRPVQNSRGCADMDPGADSTTNCVQPEGD
SCHLGFLELSQSQDLQAEEILGCPSHTDKPRSSAERSVGAETQSLVAPRSEVSSSSSSGS
VWQANLQVLSRAPNASGCAERDLRDQEILSSQEDLFDADKTGAAVDSTVSQSDQQGHPSL
TPAHTLRLLHLSGQGTLVQDSLSQNSGDYVGPTPDSFPHTPLIVPSSPTEPEPPNGAGDA
MDTSKPQPSASTPVSQSTPGFAFERLLPVPSQPEFSHDVFAPTQSQKASQPQEKSPSSDL
GLDPAPCSTLQLSESCSRQERSLEEDSQATQIEAPEEAPSGDISPCRTPGSDARGEGGAA
EEPTITELDRDSLDVEDAGRRAHSPPPEATPSSLPSQSVISQPAVADSGGGNAMSLSEEA
HQHGAETDKGRGVGCDEGEEEEPAGGPSGLALVLSQSQLLSPEHMEEGEDEGGERPPHRE
NGHAPISNSLPHKEVQPASDGTSQTGMLGRKAQSLEDKSLSDSSADMSFHFTLPKDGELT
GPPASATPPLVSQLGQTLRHSTPIETASFSEKSDVPAEVAGADSPSVDGDGKLSLRMKLV
TPVEEGSSERFSLQKPALSEEDAAGVKVATVSMAAPSSPSVFTRVRQVHRQREAGGDLQP
GSSTTAVEEGLSASPKRSSQMPSRGCSSLPSSQPEPLQQGGSAVPQGSLKPAVEPPEEQQ
GAPQAPEPPRPGAADPQKRVSQQAVNSTVTSTPSKGEPESPLLRRAAGPAHHRHVRTIQE
VRTTITRIITDVYYEDGREVDRRVTEESEEPVVDCQVLEEVSPCRTGSSSVTLGDLADIS
SLSSKASSLQHSSGGTSSSTGPPRPDFVIPPSRGARSMRGGAVGSLQRTVAHGHTPSSSE
EEPYTLIGPPLLPVSPTDPKPPSRSDSLRSSPEVASSAGSSFVGLRVVAKWSSNGYFYSG
RIMKDAGEGRFRLRFDDGYECEVAGRDILLCDPIPVETEVTALLEDEYFSVGVVKGHRAE
GSELFYSIERDGQRHWHNRTAVILSLDQGNRLREQHSLGPYETSTPLTKASDISLDNLVE
GKRRRKGTPGGAHTPNRSSSSSPRTPGPSGKRKLMAPEENRTPSKRGRRGGGSRAAQRFT
VCNTSGSGTELPGQSGDPAETHGPLPQNASLFMGFAFMLTASSETDRLSNLAFSEDEEDY
VQTGPYNKAYTESQLQAGGGFILPDFNEEQCQAAYQSLLIADQHCRTRKYLLCVSSGVPC
VSHIWVRDCCRENKLLNYRNYLLPAGAGPDGAIVEWHPRCSPFKALHVLLLSQQPQELWA
QLATMGGASSVRQLQVDDSSDIPAGKFDVAVTDHTCPPQVRRRVTSQEVPVVPPEWLIQS
LICGKRMDFRRGWDGSSSPCSSSS
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggatcccagtggaagcgacctggactccagcctgccgcagccagaaaacccgtgcctg
atcgtggaggactcccagccggacagtgtcgctctggaggacgaccccgagagcagctac
cgagccctgctagcccgccgcctgtccatcctgcagcccgcttcccgcagcccagtcctg
gagctgatctcgtcccccttgggcagcagaagctctcagaccgacagccagtccacgtcc
gacactgaccggcagccctgtggggctgtcagcggccgtccggtgcagaacagcagaggg
tgtgcagacatggatcctggtgctgattctacaacaaactgcgttcagcctgaaggggac
tcttgtcacctgggcttcctggagctctctcagagtcaggatctccaggctgaggaaatc
ttaggttgcccctcccacaccgacaagcccagaagctcagcagagcggagtgttggtgca
gagactcaaagccttgtggcgccaaggtctgaggtgagctccagcagctcctcggggtct
gtctggcaggcgaacctccaggtcctgtcgcgcgcccccaacgcgtcaggctgcgctgag
cgggaccttcgggaccaggagatcctgtcgtcgcaggaagacctgtttgatgcagacaag
acaggagctgcagtggacagcaccgtgtcgcagtcggatcagcaaggccacccctccttg
accccagcccacaccctgcgactgctacatctgtctggacagggcactctggtgcaggac
agcctgtcccagaactctggggattatgtgggccccactccagacagcttcccccatact
cctctgatagttcccagttcaccaacagaaccagaaccaccgaatggtgctggggatgcc
atggacacctctaagccacaaccctctgcctccactcccgtgtcccagagcacgcctggt
ttcgcctttgagcgcctccttccagtgccgtctcagcccgagttctcccacgacgtgttc
gccccgacacagagccagaaggcctcacaaccacaggagaagtcgccgtcttctgatctg
ggtttggatccggcaccgtgttccactttgcagctgtctgagagctgcagccggcaggag
cgcagcctggaggaggacagtcaggccacgcagatcgaggcgccggaagaggcgcccagc
ggggacatcagcccctgcaggactcccggctctgatgcgaggggagaaggtggtgcggcg
gaggaaccaaccatcacagaacttgacagggactctctggacgtggaggatgcgggcagg
cgggcgcactcgcccccgcctgaagccacgcccagcagcctgccttcacagtccgttatc
tctcagcctgccgtggctgactccggaggaggaaacgccatgagcctgtctgaagaggca
catcagcatggagcagagacagacaaagggaggggggtcggatgtgatgaaggggaggaa
gaggagcctgcaggaggcccttcaggactggctctggtcctgtcccagagccagcttctg
tcccctgaacacatggaggagggggaggacgagggtggagagaggcctccgcacagggag
aacggacacgcccccatctccaacagcctcccccacaaagaggtgcagccggcttcagac
gggacgtcccagacggggatgttggggcgtaaagctcagagcctggaggacaaaagtctg
agcgacagctcagcagatatgtcctttcacttcactcttcctaaagatggagagctgaca
ggcccccctgccagcgccacgccgcctctggtcagccagctggggcagacgctcagacac
agcacccccatcgaaaccgcctccttttccgaaaaatcggacgtccccgcagaggtggcg
ggggcggactccccctcggtggacggggacgggaagctgagcctgaggatgaagctggtg
acgccggtggaggagggcagctccgagcgcttcagcctgcagaagccagctttgtcagag
gaggacgcagccggggtcaaggtcgccaccgtttccatggcagcccccagcagtccctct
gtgttcacccgagtgcggcaggtgcaccggcagcgggaggcggggggagacctccagcct
gggagcagcaccacggctgtcgaggaggggctgtcggcgtccccaaagaggagctcacag
atgccttcgcgtggatgcagcagcctgccgagcagccagccggagcccctgcagcagggg
gggtcggcagtgccgcaggggagcctcaagcctgccgtcgagccacccgaagagcagcaa
ggggcacctcaggcccctgagcccccccgtccaggtgcagcagacccacaaaaacgggtc
tcccagcaggcggtcaacagcacggtcacctccaccccctccaagggagaaccggagtct
ccgttgctcaggagagccgccggcccggctcaccacagacacgtacgcaccatccaggag
gtgcggaccaccatcacgcgcatcatcacagacgtctactatgaggatggcagggaggtg
gatcgcagggtcacagaggagagtgaggagcctgtggtggactgccaggtcttggaggaa
gtttctccgtgccgcacaggcagcagctcggtcaccttgggggacctggcggacatcagc
tccctgtcctccaaggcctccagcctgcagcacagctctgggggcaccagcagcagcacg
ggccccccaaggccagacttcgtcattcctcccagcagaggggcaagatccatgagaggg
ggggctgttggctcgctgcagaggaccgtcgctcacggacacacgccgtcttcttcagag
gaggaaccctacaccctcatcgggcccccgctcctccccgtcagccccacagaccccaaa
cccccaagccgctcagattccctcaggtcctcgccggaagtggcgagctcggccggcagc
agcttcgtgggactgcgcgtcgttgccaaatggtcctccaacggctacttctactcgggc
cgcatcatgaaggatgccggggaggggcggtttcgcctgcgtttcgatgacggctacgag
tgtgaggtggcgggaagggacatcctgctgtgtgaccccatccccgtggagacagaggtc
acagctctgctggaagacgagtacttcagcgtaggggttgtgaagggccacagggctgag
ggctccgagctgttctacagcatcgagcgggacggccaaaggcactggcacaaccgcacc
gcggtcatcctgtctctggaccaggggaaccggctgagggagcagcacagcctgggaccc
tatgaaacgagcacccccctgaccaaagcatccgacatcagcctggataacctggtggag
gggaagaggaggcgcaaaggaaccccagggggggcgcacacccccaaccgcagctcctct
agcagccctcggacccccggcccctccggcaaaaggaagctaatggctccagaggagaac
cggacgccgtcaaagaggggacgcagagggggggggtctcgagcggctcagcggtttacc
gtctgtaacacgtccggcagcggcaccgagctcccaggtcagtccggtgacccggcggag
acgcacggcccccttccccagaacgcgtccctcttcatgggtttcgctttcatgctgacg
gcctcgtccgagaccgaccggctgtcaaacctggccttcagcgaggatgaggaggattac
gtgcagacgggtccgtataacaaagcctacacagagtcccagctgcaagccggggggggc
ttcatcctcccggacttcaatgaggagcagtgtcaggcggcctaccagagcctgctgatc
gcagaccagcactgccgcaccaggaagtacctgctgtgcgtgtccagcggcgtgccgtgt
gtgtctcacatttgggttcgggactgctgcagagaaaacaagctgctgaactacaggaac
tacttgctgccggcaggggcggggcctgacggcgccatcgtggagtggcatccgcgctgc
agccccttcaaggccctgcacgtcctgctgctgtcgcagcagccgcaggagctgtgggcg
cagctggccaccatgggcggggcctcctcagtgcggcagctgcaggtggacgacagctca
gacattcctgccgggaagttcgacgtggcggtgacggaccacacctgtccgccgcaggtc
aggagaagagtgacatcccaggaagtgcccgtggtacctcccgagtggctgattcagagt
ctgatctgcggcaagcggatggattttcggcgcggctgggatggctcctcctctccgtgc
tcctcctcctcctaa
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