Oryzias latipes (Japanese medaka): 101166007
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Entry
101166007 CDS
T02443
Name
(RefSeq) rho guanine nucleotide exchange factor 18 isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101166007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101166007
Membrane trafficking [BR:
ola04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101166007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH
PH_13
Motif
Other DBs
NCBI-GeneID:
101166007
NCBI-ProteinID:
XP_020566909
LinkDB
All DBs
Position
17:complement(30218055..30226754)
Genome browser
AA seq
949 aa
AA seq
DB search
MDNPDSRFRPPPEDAQSLGFAESINFEEHHYAMLQKGLESDAQNLEAESWSLTVDQNVLE
RLSKEAVKRQDVIYELIQTEMNLVRTLKIIFHVYMHELRQALQMDDPHLERLFPAVESLL
GLHQLFLLSLKELQSRSLQEGQAVISVAQLASILISQFSDLAGEHVIHSYSHFCSHQSEA
LSFFKEQMQVNRKLHILVKRIDQLPLVRRLGLPECFLLVAQRITKYPVLVERILQNTGAD
TEEHRSLQKGLGLIKDAISQVDTNVCEYMKTARLRDIGHRLEGRPQSRPKEPCPFRREDL
IQGSCSLLHEGTLTWKWSGKQKEVLAVLLSDMLLLLQEKEQKLVFASMENRVQVIPLQRL
IVREVAMEEKAMYLIYVSASAMPEMYELHSSSKDECLRWMALIRQAVDSQQEEELYKEQI
RPLQQFQDQLQKWDRQIVECLTGKLKDSAALYENLAAQKPPHTSLLLHGDTKEALQGGGL
LNGAIEEVENLQNMLFMQLMDPNVPAEGGLPRSSKQPRELRGKGEEEPGRSSKTSSDGGL
LSSGEDAVDVAEDLHLDHGEQPLPADASADLEDPAEAEVDAPPKHRSASSSGFDSGTDMC
DVVMKLVKTLYSLKAVIAKQDSRIELQQAIQLKIKQPRHHGNLLLEKERQRTLEKQKEDL
ASLHKLQAQHREEQQRWEKERERQMKRVEVLEAQLQQREEECKRREETLSEEKSQLERQK
EAYQQDLERLREATRSVEKEHRRLGQERERVDKLRQKLSRGQHNYEDATAARNPVLGSQP
SGLSSHPSLGVNGGGPKATLRPDDTPPKVPQRNESMRSRPSKQHNPPYASKTTSQVQNPP
GVQQKIPTKLATKGKEKSFKGKRTHQRAQSAASIDVTEVLPIRTTGKEGGSLRAQRSNSP
RRNLNPDAFRPSRSPQNRRRNSPEAPPPRPPPFPTEILDKGAEKLQTTL
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggataatcccgacagccgcttcagacccccccccgaggacgcccagtctctgggtttt
gcagagtccatcaactttgaagagcatcactatgcgatgctgcaaaaaggtctggagtct
gacgcccagaacttggaggcggagtcctggagcctcaccgtggaccagaacgttctggag
aggctgagcaaggaggccgtgaagaggcaggacgttatctatgagctgatccagacggag
atgaacctggttcgcacgctgaaaatcatcttccacgtctacatgcacgagctgaggcag
gcgctccagatggacgacccccacctggagcgcctcttccccgccgtggagtctctgctc
ggcctccaccagctcttcctcctgtccctgaaggagctccagagccggagtctgcaggag
ggacaggcggtcatcagcgtggcgcagctggccagcatcctcatctcccagttttcagat
ctggcgggggaacatgtgattcacagctacagccacttctgcagccatcagtctgaagct
ctcagcttcttcaaagagcagatgcaggtcaacaggaagctgcacatcctcgtcaaaaga
atcgaccagctgcccctggtgcggcggttgggactccccgagtgttttctgctggtggcc
cagcgcatcaccaagtatcccgtcctggtggagcggatcctccagaacaccggagccgac
acggaggagcacaggagcctgcagaaaggtctggggctgatcaaagacgccatctcccag
gtggacaccaacgtctgcgaatacatgaagacggcccgtctgagggacatcggccaccgt
ctggagggccggccgcagagccgacccaaagagccctgcccgttccgcagggaggacctg
atccagggcagctgctcgctgctccacgaggggacgctcacctggaagtggtctgggaag
cagaaagaagtcctggccgtgctgctgtcggacatgctgctcctcctgcaggagaaggag
cagaagctggtgttcgcctccatggaaaaccgagtgcaggtgattcctctgcagaggctg
atagtcagggaggtggccatggaggagaaggccatgtacctgatctacgtcagcgcctcc
gccatgccggagatgtacgagctccacagcagctccaaggacgagtgtctccgctggatg
gcgctcatcagacaagccgtggacagtcagcaggaggaggagctgtacaaggagcagatc
agaccattgcagcaattccaagatcaactccagaagtgggacaggcagatcgtggagtgt
ctgaccgggaagctgaaggactctgccgcgctctacgagaacctggcggcccagaaaccc
ccccacacgtctctgctcctgcacggcgacacaaaggaggccctgcagggaggggggctc
ctcaacggagccattgaggaagtggagaacctgcagaacatgctcttcatgcagttgatg
gacccgaacgttcctgcagagggggggctgccgcggagctccaagcagcccagggagctg
aggggtaaaggtgaagaggagccgggccgatcctctaagacctcctctgatggtgggctt
ctgtcctcaggtgaagatgcggtcgacgtggcggaggaccttcacctggaccatggagag
cagccgcttcctgcagacgcgtctgcagatctggaggaccctgctgaggcagaggtggac
gctcccccaaagcacaggagcgcctccagctccggtttcgactccgggacagacatgtgt
gacgtcgtcatgaagctggtgaagacgctctacagcctgaaggcggtcatcgccaagcag
gacagcaggatcgagctgcagcaggccattcagctgaagatcaagcagccccgtcaccat
ggcaacctgctcctggagaaggagcggcagaggaccttggagaagcagaaggaggacctg
gccagcttgcacaagctgcaggctcagcatcgagaggagcagcagcgatgggagaaggag
cgcgagcggcagatgaagcgggtggaggtcctggaggcccagctgcagcagagggaggag
gagtgcaaacggcgggaggagacgctgagcgaggagaagagccagctggagaggcagaag
gaggcgtaccagcaggacctggagaggctgagggaggccacgcgctccgtggagaaggag
caccggcggctggggcaggagagggagcgtgtggacaaactgaggcagaagttgtcgagg
ggacagcacaattatgaggatgcgactgcggcgaggaacccggttctgggctctcagccc
tccggtctctcctctcatccgtcgctcggcgtgaacggaggagggccaaaggcgaccctt
cgacctgacgacaccccccccaaggttcctcaacgcaacgagagcatgcgcagccgtccc
tccaagcagcacaaccccccctatgcgagcaagaccaccagccaggtgcagaacccccca
ggggtccagcagaagatccccaccaagctggccaccaaagggaaggagaagagcttcaag
gggaaaagaacccaccagagagcccagagcgcagcttccatcgacgtcactgaggtcctg
cccatccgaacgacggggaaggagggaggcagcctgagagctcagaggagcaacagtccc
aggaggaacctcaacccagacgccttcagaccctccagatctcctcagaacaggaggcgc
aacagcccggaagctcctccccccaggcccccgcccttccccacagagatccttgacaaa
ggagcagagaagctgcaaacaactctttga
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