Oryzias latipes (Japanese medaka): 101166038
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Entry
101166038 CDS
T02443
Symbol
cilp
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ola04990
]
101166038 (cilp)
Domain-containing proteins not elsewhere classified [BR:
ola04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
101166038 (cilp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
TSP_1
Ig_2
I-set
CarboxypepD_reg
CarbopepD_reg_2
TSP1_spondin
Ig_5
ig
TSP1_CFP_C
Prok-E2_C
Motif
Other DBs
NCBI-GeneID:
101166038
NCBI-ProteinID:
XP_004067079
UniProt:
H2LP43
LinkDB
All DBs
Position
3:18387659..18394342
Genome browser
AA seq
1163 aa
AA seq
DB search
MWVKREIMPQRPLVFLAITAAVVLTAQGSWRRDNKASDVYHSNDHYMWTTWFNVDHPGGR
GDYEQLDAIRFYYRSRVCETPRAVEARTTEWIPARETGEIVHADPSVGFWCLNTEQSPGR
NCSNYAVRFLCPKDSSQTTQGTWGPWSNWSPCPALCGQEAMQRRYRSCRSQLVPCSGPKT
EEKPCNGPECINADCSLRCVMGRVNADCDACMCEEHILLGSVRSAGGLIATGAAILRANK
LLTLTDHNGHFRIPGICPDGNTTLTVNVKGHASLNAVVPSSTERTSVLTIQLKRAEKLHI
LSNPESKARREGQSVAFCCKVAGRPEPDKYQWFHNNTVMEMETDGMLVLRDLHSQQAGEY
YCRASGASGTIKSKPATLKVIGKDERSCNPKPESHLIRLPHDCHQNTTDSFYYDVGKCPS
SQCTGQIDNSIRCKDKLAYCCGVAKMEERQLTCQGYQLPTMVVTECGCKKCVDTKAVVHG
RAIAADNGEPMRFGHIFMNGVRVSRTGYKGTFSIQVPPDTDRFVLTFVDNMQKFVNTTKV
LPFNTKGGAVYHEVKLLRKKNPVTISSLETNTLELGEVKDQEAMVQIQIPPHSFYKENGE
VFTGNVSASVTFLDPRDVSTAAAAQSDLNFIGNEGDTLPLRTYGMFSIDFRAEENNEVLN
AGEVKVFLDSAQVKMSEHLDAMKLWSLNPDTGLWEEEGDLKIERKNRGKREERTFLIGNM
EIRERRLFNLDVPENRRCYVKVRAFRGERFMPSEQVEGVTVSLINMEPTAGYSSNPRAWG
RFDSVITGSNGACLPAFCDEQKPDAYTAFVMANLGGEELEVVPSAPKFNPSLIGVPQPYL
GKLNYRRTDHEDPRVKKTAFSINVAKPSPNTAEEANGPVYTFENLKECEEAPFSAGHFRF
SRVEGDRYDYNTVPFNEDDPMSWTEDYLSWWPKPMEYRACYIKIKINSPHEINVRSRNMG
GTHPKTVGQLYGLRDTRSIRDMDLANVSAVCLEFKCSGMLFDQDRVDRTLVKVIPQGSCR
RDGVNTMLQEYLVNHLPLAVNNDTNEFTMLGPLDPLGHNYGIYTVTDQDPRTAKEIALGR
CFDGTSDGTSRVMKTNEGVALTFTCGDRDGTRQSVFQASRGQIGAVVRGKTRNTRGRHRA
NSSRGIPKRSARNPVRKLAKATS
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgaaaagggaaataatgccacagagacctcttgtctttctggcaatcacagca
gctgttgttctaactgctcaaggatcatggagaagagacaacaaagcgtcagatgtctac
cactctaatgatcactacatgtggacgacatggttcaacgttgatcacccgggcggccgt
ggagactatgagcagctggatgccattcgcttctattaccgctccagagtgtgtgagact
ccaagagctgttgaggccagaaccacagaatggatcccagctcgagaaacgggggagata
gttcatgcagacccctcagtgggtttctggtgcctcaatacagaacagagtcctggtcgc
aactgctccaactatgcagttcgtttcctctgtcctaaagatagcagtcaaactacccaa
ggaacatggggtccttggtcaaactggagcccatgccctgccctttgtggtcaagaggcc
atgcaacgtcgttatcgaagctgtcggtctcaactggtaccatgcagtgggcctaaaaca
gaggaaaagccatgtaatgggccagaatgcataaatgcagattgctccctgcgctgtgtg
atggggagagtaaatgcagactgtgatgcatgcatgtgcgaagagcacatcctcctgggt
tccgtccgcagtgcgggcggtctcattgctacaggagcggctatcctgcgggccaacaaa
ctgcttactctaacagaccacaacggccactttcgcatccctggtatctgccctgatgga
aacacaaccctcacagtcaacgtcaaaggccatgcaagcctcaacgctgttgttcccagc
agcaccgaacgcacctctgttttgaccatccagttgaaaagagccgaaaagttgcatatc
ttgagcaaccctgagagcaaagccaggagagaggggcaaagtgttgccttttgttgtaaa
gttgcaggaagaccagaaccagacaaataccagtggttccataacaacacagtcatggag
atggagactgatggcatgctagtcttgagagatctacactcccagcaggccggagagtac
tactgcagagcaagtggggcatctgggaccatcaagtctaagccagccactcttaaagta
attggtaaagatgagcgctcgtgcaaccccaagcctgaatctcacctaatccgccttcca
catgactgccaccaaaacaccacagactctttctactatgatgttggaaagtgtccgtct
agtcaatgcactggacagatagacaacagcataaggtgcaaggacaaactagcttattgc
tgtggagtggcaaagatggaggagagacagctgacatgccaaggataccaactaccaacc
atggtggttactgagtgtggctgtaagaaatgtgtggacaccaaggccgttgtgcatggc
agggccattgctgcagacaacggtgagccaatgagattcggtcatattttcatgaatggc
gtcagagtcagcaggacgggctacaaaggcaccttctccatccaggtccctccagacact
gacagatttgtgctaacttttgtggacaacatgcaaaaatttgtcaacacaacaaaggtg
cttccatttaatactaaagggggggctgtttaccatgaggtcaaacttctgcggaaaaaa
aatcctgtcactattagttccttagaaactaacactcttgagcttggggaagtaaaagac
caggaggccatggttcagatccagattcctcctcattccttctacaaagaaaatggggaa
gtctttacaggtaatgttagtgcaagtgtgacatttctagaccccagggatgtctccaca
gctgctgctgctcaaagtgatctaaactttataggaaatgaaggtgatacactcccactg
agaacatacggaatgttctcaatcgatttcagagccgaggaaaacaatgaggtcctgaat
gcaggtgaagtcaaggtgtttctggattctgcccaagtaaaaatgtcagaacaccttgac
gccatgaaactgtggtctcttaatcctgacacaggtttatgggaagaggagggtgatcta
aaaatagaaaggaaaaatagaggtaaaagagaagaaaggacatttctgattggaaacatg
gagatcagagaaagaaggttattcaacttggatgttcccgagaaccgaaggtgttatgta
aaagtgagggcctttcgtggtgaacgcttcatgcccagtgaacaagtggagggagtcacg
gtgagtctcattaatatggagccaacggctggatattcctccaacccacgtgcctggggt
cgatttgacagtgtcattactgggtcaaatggtgcctgccttcctgccttctgtgatgaa
caaaagcctgatgcttacactgcttttgtaatggccaacctaggaggggaggaactagaa
gttgttccatctgcccctaaatttaatccaagtctcatcggagtgccccagccatacctg
ggtaaactgaattacagacgcactgaccatgaggaccccagagtgaagaagacagcattc
agtatcaatgtggcaaaaccaagtcctaacacagcagaggaagccaatgggcctgtgtac
acttttgagaatttaaaagaatgtgaggaggctccatttagtgcgggacacttccgcttc
tcaagggtggaaggagaccgctacgattacaacacagtgccattcaatgaagatgaccca
atgagctggacagaggattatcttagctggtggcctaaacccatggaataccgcgcctgt
tacatcaagatcaaaatcaacagcccacatgaaatcaatgtacggtctcgcaacatgggt
ggcacccatccaaagactgtaggccagctatacggcctcagagacactcgcagtatccga
gacatggacttggcaaatgtttcggctgtgtgcctggagttcaagtgcagcggcatgcta
tttgatcaagaccgtgtggatcgcaccttggtgaaggtgatcccacaagggagctgcagg
agagacggtgtgaacacaatgctccaagagtaccttgttaatcacctgcctttagctgtc
aacaatgacaccaatgagttcaccatgctgggacctcttgatcctttgggccataactat
ggaatctatactgtgactgatcaggatccccgaacagccaaagagatagcactaggacgt
tgctttgatggtacttctgatggaacgtcacgagtcatgaagaccaatgaaggtgtagcg
ctaactttcacctgtggagaccgcgacggaacacgccagagcgtcttccaagcctctcgg
ggtcagataggtgcagttgtgagaggaaaaaccagaaacaccaggggtcggcatagggcc
aatagctcccgcggcatccctaaacgtagtgccagaaatcctgtgagaaagcttgcaaaa
gccacaagctaa
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