Oryzias latipes (Japanese medaka): 101166205
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Entry
101166205 CDS
T02443
Symbol
uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101166205 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ola03400
]
101166205 (uimc1)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
101166205 (uimc1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
zf-WRNIP1_ubi
Motif
Other DBs
NCBI-GeneID:
101166205
NCBI-ProteinID:
XP_023818684
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Position
14:complement(30149236..30191057)
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AA seq
791 aa
AA seq
DB search
MSVRRKLIRGTSVQMDEEEEDDLQDGQAESAALPKMRAKRRRETKSKEMSEEEMMDLALR
LSEQEASATELRQQEEEEAMMKAIQQSMFDQTQPFQTAFSSGSPHLLSRRKLSFPNGEKL
FRGSPAGLDSGCSPEPFSEKTEEIRKKRLKKSGSHLPEMLDLSQAERTDSEASADSCNPP
PAPLDSPQSSDSTRIDESEPQESPVFPLTGCRAVVHVDRLSEEVVDSCRHSGFVSSSQDT
WSWTQKSTWTRSPTFPQSNPKTPGSPTAGPELVSSSQESPTPPLSCRSPVFLRSPSEILS
TAASQQRSPPHMQTPGRDDQNCRQLPAVAEEQRNASCSYTPPGSNMMLVWSDEDDVTLLR
SPSPVFPKERRLYGTEAPAASMDNAAPNHSSSDQHSSSTSAPACRKEPATSTEEVLRPAC
RETPGGQTVHYFWGIPFCPLGLDPDAYTQVIEAQMEVYEKSLKQAQRRLPRKAEWAEPIL
PEPEKASSPETAAGSPRLRASQRPGLMLRRGRTTEEHPDQEEEEQHQEEEQKDADICPET
QLSGEDGAGGRSLPTEPPFPGCPEPPEVQVILQDDHSDGSAQTVDRGPASPGGVEVTEAG
DPTSEAAVVPGSPPTSVDCPICQLSFPAGDIEMHAAFCNGGVADDGTSLSGFQESPKPRR
QRARRAEAAESSQPSDACRILEKCFICQSAIPLREYSHHTELCIRRRRSKLAAKGNLLSA
LQDTESRSADLQASGSKVQPDDVIDLRNDDPDASRVTDSPIRTLTPISEVTDCLVDFKKQ
NRAKKPSQRRR
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaggaggaagctcatcagaggaacctctgtgcagatggatgaagaagaggag
gatgacctccaggacggccaggccgagtctgcagctctgccaaagatgagagcgaagagg
cgcagagagaccaagtccaaagagatgtcagaggaggagatgatggacctggccctccgt
ctgagtgaacaggaggccagcgccacagagctgcggcagcaggaggaggaggaggcaatg
atgaaggccatccagcagagcatgtttgaccaaacccagccgttccaaaccgccttctcc
agcgggtcaccacaccttctgtctcgacggaagctctcgtttccaaacggggagaagctg
tttcgaggcagtccggcaggtctggacagcgggtgctcacctgaacccttctcagaaaag
acagaggagatccggaaaaaaaggttgaagaaatcaggaagtcatctgccggagatgctg
gatctgtcccaagcggagagaacagactctgaagcttcagctgactcctgcaaccctccc
cctgctcctctagactccccacagagctctgactccacccggatcgacgagtctgagcct
caggagtcgccggtgttcccgctgaccggctgcagggctgtagtccacgtggaccgactg
agcgaggaagtggtggatagctgcagacactctgggtttgtgtcttcttctcaggacact
tggagctggacgcagaagtccacctggaccagaagccccacctttccccagagtaaccct
aaaacccccggtagcccaaccgcaggcccagagcttgtctcctcctctcaggaaagtccc
acgccccctttaagttgcagaagcccagtgttcctccgaagcccctcggagatcctcagc
actgctgcctcacaacagaggagccccccacacatgcagaccccagggcgggacgaccag
aactgcagacagcttcctgcagtcgcagaggagcagaggaatgcatcgtgcagctacacg
ccgcctggcagcaacatgatgctggtctggtcagacgaggacgacgtcacgctgctcagg
tctccaagtccggttttccccaaagaaagacgcctttacgggactgaagctccagcagct
tcaatggacaacgctgcacccaaccacagcagctcagaccaacactcctcttctacatct
gctcccgcctgcagaaaagaaccagccacctccacagaggaagttctcaggcctgcgtgc
agagagacccctggtggacagacggtgcactacttttggggtatccccttttgccccctt
ggtctggaccctgacgcatacacccaggtaatcgaggcgcagatggaggtttacgagaag
agcctgaagcaggcgcagaggcgtttgcccaggaaggccgagtgggcggagccaatcctg
ccggagccagagaaagcttcatcacctgaaacagcggcgggatctcctcgtcttcgtgct
tctcagagaccaggcctcatgctgagaagaggaaggaccaccgaggagcatccagaccag
gaggaagaggagcagcaccaggaggaagagcagaaggatgctgatatttgtccagaaacg
cagctgagcggagaagacggcgcgggggggcggagcctgccgacagaaccgccttttcct
ggatgccctgagccgccggaggtccaggtgatcctgcaggatgatcatagtgacggctca
gcacaaactgtggaccgaggtcctgcatctcctgggggggtggaggtgacagaagcagga
gatcccacttcagaggcagctgtggtccccggcagcccccccacctcggtggactgcccc
atctgtcagctgtccttccctgccggcgacattgagatgcacgctgcattctgcaacggg
ggggtggcggatgatgggacgagcctctcaggtttccaagagtccccgaagcctcgacgg
caaagagcgaggagagcagaggcagcagagagcagccagccgtcagacgcctgcaggatt
ttagagaagtgcttcatctgccagagcgccattcctctcagagagtacagccaccacacg
gagctctgcatccggcgccggaggtccaagcttgcagctaaggggaacctgctgtcggcg
ctgcaggacaccgagagcaggagcgcagatctccaagcatccgggtccaaagtccagccc
gatgatgtcatcgacctgcgcaacgacgaccccgacgcctcccgggtcactgactccccc
atcagaaccttgactcccatctctgaggtcacggactgcctagtcgacttcaagaagcag
aatcgggccaagaagcccagccagaggaggagatga
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