Oryzias latipes (Japanese medaka): 101166215
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Entry
101166215 CDS
T02443
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101166215
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101166215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
101166215
NCBI-ProteinID:
XP_011472886
UniProt:
H2MSR1
LinkDB
All DBs
Position
4:complement(32380031..32412533)
Genome browser
AA seq
1014 aa
AA seq
DB search
MAASNYFGFTHGAGPQYSTQPPPSYSLPSTATYSVQQASAVPHVVTASYSPASVQAARPV
ASSPYPTYQSHQAPPDFTYRQPDPPQPTTTPQTYQVFSDMENYNYGRPAAVTTYDNKQYY
QTSIASAQRAHTENYYQSGVKSAYSPASSTIYNQPPPTQRQVAALKPLVPSSSVSTTYNV
YPVATSVQQPPAPISSYTLGSTFSSSAAATSYSGLNYSSYDSAGYTSASTPSYYQPAQQT
LPQGPPPQSQQPQPSVQQQPKQLTSSSWSNSGSNMVTAPAGNAYKKPAFHQNKLQRPKGP
PKQSQLHYCDICKISCAGPQTYREHNEGQKHKKKEAALKAGAQSGASNGPRGVQTQLRCE
LCDVSCTGVDAYAAHIRGAKHQKVVKLHTKLGKPIPSSEPVLVNSAPILASSSAGKPPAS
PASSSPSTAAAPAAKLKQTAGNPPAKAVLPVKKPAFSKMSAAAHKPVGARAVTSAAEEPV
LPPVPKLKPQSEDEGAGGQGDIQPVGHDYVEEVRNDDGKVIRFHCKLCECSFNDPNAKDM
HLKGRRHRLQYKKKVNPELPVEIKPSNRARKLQESKLKKLKQKAVLKRQRDDEQHWHLEM
RRYEEDIYWRRLEEEQMYWGDQRRRIAPPPLMSRPGMPVPPLLTCVRRPDSSDDRHIMAK
HSTIYPVEEELQAVQRIVSHTERALKLVSDSLLEKEVPAPASTSEDGEEKSADSAARLLK
GVMRVGILAKGLLLRGDRNVELILLTAKKPTVTLLKTVAKQLPKELEIFSEDQYEVQARP
EEANIVIISSKEPQMQVTISLTSPLMREDPAAETDKQAGGKAAEKDAFDKDPPDLLSKKK
CLENLAALRHAKWFQARANGLQSCVIIIRVLRDLCQRVPTWGKVPSWALELLVEKAISSA
AGPLSPGEAMRRVLECISTGVLLPDAPGLLDPCEKEQTDALKGVNLQAREDITASAQHAL
RLLAFRQIHKVLGMESLPASKASARNRKRRRDVGEAGEGEGEGKKDKKEEATSA
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaagcaactattttggcttcacacatggtgccggtccacagtacagtacccag
cctcccccttcctactccctcccctccacagccacctacagcgtccagcaggcctcagcc
gtgccccatgtggtgacggcgtcctactctccagcttcagttcaagctgctcggcctgtt
gcctcgtctccttaccccacctaccagagccaccaggcgccccccgacttcacctacagg
cagccagatccgcctcagccgaccaccacgccacagacgtaccaggtattctcggacatg
gaaaactacaactacggacgtcctgctgccgtgacaacctacgacaacaaacagtactac
cagaccagcatagcctcagctcagagggcacacactgagaattactaccagagcggagta
aagagtgcttacagcccagcctcctcaactatttataaccagcctcctccaacccagagg
caggtggccgccctaaagccgctggttccctccagctctgtgtccaccacttacaacgtc
tatcccgtggccaccagtgtccagcagcctccggcgcccatttcctcctacaccctcggc
tccacctttagctcctcggctgctgccacttcctactcgggcctaaactactccagttat
gattcggccggctacacctctgcatccaccccctcgtattaccagccggcccagcagact
ctgccccagggtcccccgccgcagtcgcagcagcctcagccgtccgtccagcagcagccc
aagcagctgaccagctcctcctggagcaactcggggagcaacatggtgacggctccagct
ggaaatgcctacaagaagccggcgtttcatcagaacaagctgcagagacctaaagggccc
cccaagcagtcgcagctgcattactgtgacatctgcaagatcagctgtgctggaccgcag
acgtaccgggagcacaatgaaggccagaagcataagaagaaggaggcggcgctgaaggcg
ggggcccagtctggggccagcaatgggcccagaggcgttcagactcagttacgctgcgag
ctgtgcgacgtgtcctgcactggcgtggacgcctatgccgcccacatccgtggagccaag
caccagaaggtggtgaaacttcacacaaagcttggcaagcctatcccatcatcggagccg
gttctggtgaattctgctcccatcctcgcttcctcgtcggcggggaaacctccagcatct
cccgcctcctcgtcgccctcgaccgctgcagcgcctgctgctaaactcaagcagacggct
ggaaacccccccgccaaagcagtcctgccagtgaagaaaccagcttttagcaagatgtct
gccgccgctcacaagccggtcggcgcccgtgcggtgacatcagcggcagaagagccggtt
ctgccccctgtcccgaagctgaagccacagagcgaagacgagggagctggaggccagggg
gacatccagcctgttggacacgactacgtggaagaggttcgtaacgatgatggaaaagtc
attcggttccactgcaaactatgcgagtgcagcttcaatgacccgaacgctaaagacatg
cacctgaaaggcaggaggcaccggctgcagtacaagaagaaggtgaacccggagcttcct
gtggagatcaaacccagcaacagggccaggaagctacaagagagcaaactgaagaagctg
aagcaaaaggccgtcctgaagagacagcgagacgacgagcagcactggcatctggagatg
aggcgctatgaggaggacatttactggaggaggctggaggaggagcagatgtattgggga
gatcagaggcgcagaattgcacctcctcctctgatgagtcgccccggtatgccagtgccc
cctctgctgacttgtgtccgtcggccggactcctctgacgatcgccacatcatggcgaag
cactccaccatttaccccgtggaggaggagctgcaggctgttcagaggatcgtctcgcac
acggagagagcgctcaagctggtgtcagactccctgctggaaaaggaggtgccagctcct
gcttcaacctctgaggatggggaggaaaagagtgctgacagcgcagcgcggctgctgaaa
ggtgtgatgagggtgggtattctggccaaaggcttgttgctgcgcggggacagaaacgtg
gagctcatcctgctgacggccaagaaacccaccgtcacgttactgaagaccgtcgccaaa
cagctgccgaaggagctggagatattttctgaagatcagtatgaggtgcaggctcgcccc
gaagaggccaacatcgtcataatttcaagcaaggagccccaaatgcaggtgaccatttct
ctcacctcgccgctgatgagggaggaccctgccgctgagacggacaagcaggcaggagga
aaagcggcggagaaagatgcttttgacaaagatcctccagatcttctcagcaagaagaaa
tgtttggaaaacctggcagctcttcggcatgccaagtggtttcaggctcgtgctaacggg
ctacaatcctgtgtgatcatcatccgagtgctgagagatttatgccagcgggttcccacc
tgggggaaggtgcccagttgggcgttggagcttctggtggagaaggcgatcagcagcgcc
gccggtccactcagccccggcgaggccatgcggagagttctggagtgcatttccacgggc
gtcctgctgccggatgcgccgggtctgttggacccttgtgagaaggagcaaacggatgct
ctgaagggcgtgaaccttcaggcccgggaggacatcacggccagcgcacagcacgcgctg
cggctgctcgctttccgtcagatccacaaagtcctgggcatggagtcgctgccggcgtcc
aaagccagcgctcgcaaccgcaaacgcagacgggacgtcggcgaggcgggggaaggcgag
ggagagggcaaaaaggacaagaaagaagaagcaacaagcgcttga
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