Oryzias latipes (Japanese medaka): 101166224
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Entry
101166224 CDS
T02443
Symbol
dcaf1
Name
(RefSeq) DDB1- and CUL4-associated factor 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ola01001
]
101166224 (dcaf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101166224 (dcaf1)
Enzymes [BR:
ola01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101166224 (dcaf1)
Protein kinases [BR:
ola01001
]
Serine/threonine kinases: Other
Other
101166224 (dcaf1)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101166224 (dcaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
WD40
ANAPC4_WD40
Beta-prop_WDR19_1st
LisH
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
101166224
NCBI-ProteinID:
XP_011475537
LinkDB
All DBs
Position
7:complement(16271046..16286747)
Genome browser
AA seq
1558 aa
AA seq
DB search
MASAPASVDSKAELTALLEQWEREQHGSTQDLVNLLTKISELVEKETEEYHKADPDPFDD
RHPGRADPECMLGHLLKILFKNDDFMNTLVNNYVMTSREFPLNAAACRLLQNIMPGLETA
VVFQEKEGIVERLFKWAQEAEQPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLHRL
RELQDKDAENKREIKRISPRKSLSAPLLPLDEETVDRSFEEKPFTPSRNGADKQGMGPEE
DREISFSPNEPENELSFHLNSPHKTSSRVNSAVKTMMKPMSASGLSTHPGLPDGSSYLKR
RTERETARTSKQKHSFSLPEPERSFSELSNSSWSEMSPWVIGNNYHLYPLTPEIEQRLIL
QYLTPLGEYQELLAVFMQMGACELLMHYMDLKQTNDVQLTFEALKYLASLLLHKKFAAEF
VANGGVQKLLEIPRPSMAATGVSLCLYYLAYNQDAMERVCMLPHSILSDVVAYTLWLLEC
SHASGCCHATMFFSISFSFRAVLELFDRQDGLRRLVNLISTLEILNPEDQGALLSDDEIF
SSRQTAKHTCMALRRYFEAHLAIKVEQVKQSLQRTEGGAPIHSQPYYKAVSYSREQVVEM
MEFLIEYGPLRLYWEPAEVFHKLSCVQLLLQLISIACEWRTYYGRSDTVRYALDILSILT
VVPKTQILLCESIAVLDDGGATVSTVGMSIVLAVAEGEIFVNDAEIQKSALQVIINCVCA
PDKRMCSIGKFIAGTPRRRLPQQSKSSENVLTKMWNVVQSNNGIKVLLSLLTVKMPITDA
DQIRALACKALVGLSRSTSVRQIISKLPLFSSGHIQQLMKEPVLQDKRSEHVKFCKFAAE
LIERISGKPLLIGTDVSLAWLQRASVVAQSRITFPEKELLLLIRNHLLAKGLHDTATALT
KEADLPMTCLSHTSHSTSAFPSVAPPPPASPVATIPRAPRLASGVGARLGNHPSHTPIQA
SSHPQSRPSTSQPVVCSSNVLPSTSASHCNSSSPLIGRIIFSRERQTTCGTMSCKKARVL
RQKSDHGAFSQSPAMKKQFDRHLPSPPALDSIITEYLREQHARCKNPVATCPPFSLFTPH
QCPEPKQRRQAPTNFTSRHTRRVIYPKYGGVDGGCFDRHLIFSRFRPISVFREADEDESG
FMCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHSSAITHLEPSRDGSLLLTSAS
WSYPLSALWGMKSVFIMKHSFLGDHYVEFSKLSQDRVIGTKEHVARIYDIQTGQVTLTLN
NPDLANNYKKNCATFNPTDDLVLNDGVLWDVRTAQAIHKFDKFNMNISGVFHPNGLEVII
NTEIWDLRTFHLLHTVPALDQCRIVFNNSGTVIYGAMLQADDEDEMMEMQMKSPFGSSFR
TFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSVNTDTVCRLYEVGRQRLAEEE
EEDEEDQEDDDQDEDDDDDDDSDDDVDTDPLIAELENENGGEDDDDDGNEALSPSDEEVA
RLLEDDGDVEEDDDEDEDEEDDDNEEDDSDNDDADLEGDNDSSDNSDLEDDIILSLNE
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagcacccgccagtgtggactcaaaagcggagctgactgctctgctggagcag
tgggaaagggaacagcacggcagcacacaagacctggttaaccttcttacaaaaatatct
gagcttgttgaaaaggagacagaggagtaccacaaagcagaccccgacccgtttgatgat
cggcatcctgggagagctgatcctgaatgtatgttagggcatctactgaagatcctgttc
aagaatgatgacttcatgaacactttggtgaacaactatgtgatgacgagcagggaattc
cccctcaatgcagcagcttgccgtctgctgcagaacatcatgcctggattagagacagct
gtggtttttcaagaaaaggagggaatagtggaacggctgtttaagtgggctcaagaggcc
gagcagcctctcagaatttatgccacaggattgttggcaggtgccatggagaaccaggac
attgctgccaactacagagaggagaactctgttttggttcctttgatgctgcatcgtttg
cgtgagcttcaagataaagatgccgagaacaagagggaaatcaagcgaattagcccaagg
aagagtctaagtgcacctttgttacctttagacgaggaaactgttgaccgaagctttgaa
gagaagcccttcacaccaagtagaaatggagctgacaagcaggggatgggaccagaggaa
gatcgggaaatttctttttcgcccaacgagcctgagaacgagctttcattccatctcaac
tctcctcacaagacgagcagccgcgtcaactcagccgttaaaaccatgatgaagcccatg
tccgcctcaggtttatcgacgcacccaggtttgcctgacggtagcagttacctgaaaaga
aggactgaaagggagactgcaaggacgtcaaagcagaagcatagtttctctttgcctgag
ccagagaggagcttcagtgagctttcaaacagcagctggtctgagatgagtccctgggtg
atcggcaacaactatcatctgtaccctttaacccccgagatcgagcagaggcttatcctg
caatatcttactcctttgggggagtatcaggagctgctggcagtgtttatgcagatgggt
gcttgtgaactactcatgcactatatggatttaaagcagaccaatgatgtacagctaaca
tttgaagctctcaagtatctggcctcactgcttttgcataaaaagtttgcagccgagttt
gttgctaatggtggagttcagaagttgctggaaattcccaggccttcaatggctgctact
ggagtctcactgtgcctttattatctagcctacaaccaagatgccatggaaagggtgtgc
atgctgccccactccatcctgtcagatgtggttgcttacacactctggttgctggaatgc
tcacatgcttccggctgctgccacgcaaccatgttcttctccatctcgttttctttccgt
gctgttctggagctttttgacagacaggatggactccggcggctagtaaatctgattagc
acactggagatcctgaaccctgaggaccagggagcgcttctgagcgatgacgagattttt
tccagcaggcagacggccaagcacacctgcatggctctgcgcaggtactttgaagcccat
ctggcaataaaggtggaacaggtgaagcaatcgctgcagcgcaccgagggcggtgccccc
attcactcacagccgtactacaaggcggtcagctacagtcgtgagcaggtggtagaaatg
atggaatttctgatagagtacggtcctcttcgactgtactgggaaccagctgaggtcttt
cacaagctctcatgtgtccagctacttcttcaacttatctccattgcttgtgaatggagg
acctattatggcaggagcgatacagttcgttatgcccttgacatcctgagcatcctcaca
gttgttccaaaaacccaaatattgctgtgtgaatctattgctgtgctggacgacggagga
gccacagtttccacagtggggatgagtatagtcctggctgtagcagagggagagatcttt
gtgaatgatgcagaaattcagaagtccgccctgcaagttatcatcaattgtgtttgcgcg
ccggacaaacgcatgtgcagcatcggcaagttcattgccgggaccccccgccgtcgcctc
ccacagcagagcaaatccagtgagaatgtgctcactaagatgtggaatgtggtgcagtcc
aacaatggcatcaaggttttgctctcgctgttgacggtgaagatgcccatcacagatgct
gatcagatccgagctttggcctgcaaagctctggtgggcctgtcgcgctccacctctgtc
agacagatcatcagcaagctgcctctgttcagcagcggacacattcagcagcttatgaag
gagcctgtgctgcaggataaacgcagcgaacatgtgaagttctgcaagtttgcagcagag
ttgattgaaaggatctctgggaaaccgctgcttattgggacagatgtgtccctggcttgg
ctgcagagagcaagcgttgtggctcagtccagaatcaccttcccagagaaagaactgctg
ctgcttatcagaaaccaccttctggctaaaggccttcatgatacagcaaccgcactcacc
aaagaagcagatctccccatgacatgtctgtcacatacttctcattcaacctctgctttc
ccatctgtggcccctccgccgcctgcttcacctgttgccacaataccccgtgccccacgg
cttgccagtggcgttggggcaagacttgggaaccacccctcacacactcccatccaggca
tccagtcatcctcaaagccgcccctccacgtcccagccggttgtgtgctcttctaatgtt
cttccctccacatctgcctcacattgtaacagcagctctccgctgattggacgcatcatt
ttctcccgtgagcggcaaacaacgtgcggtacgatgagctgcaagaaagccagagtgctg
cggcagaagtccgatcatggtgctttcagccagagtccagcgatgaagaagcagtttgac
cgccacctgccctccccgcctgctttagacagtattatcacagagtacctccgggaacag
cacgcacgctgtaaaaacccagttgctacctgcccacctttttctcttttcaccccccac
caatgtcccgagcccaagcagagacgccaagcccccaccaatttcacctcaagacacacg
cggagagtgatttatccaaaatacggaggcgtagatggaggatgctttgacagacacctc
atttttagcaggttccgtcccatctctgtgttcagggaagcagacgaggatgagagcgga
ttcatgtgttgtgccttttcagctcgtgaacggtttctgatgctggggacgtgtacaggg
cagctcaagctctacaatgtgtttacaggccaggaggaagccagctacagctgtcacagt
tcagctatcacgcacctggagccgtcacgggatggttctctcctcttgacatcagcctct
tggagttatcctttgtctgcactgtggggaatgaaatcggtgttcatcatgaagcattcc
ttccttggggaccattatgtggagttcagtaagctttcccaagatcgtgtcattggaaca
aaggaacatgtagcacgtatttatgacatccagaccggacaggtcactcttactctcaac
aacccagacctggctaacaactacaagaaaaactgcgctacttttaacccaacagacgac
ctggtgctgaacgacggagtgctttgggatgtgcgcacagctcaggccattcacaagttt
gacaagttcaacatgaatatcagcggcgtgtttcaccccaatggcttggaggtcatcata
aacactgagatttgggatctgcgcaccttccacctcctccacaccgttcctgctctggac
cagtgcagaatagttttcaacaacagcgggactgtcatctatggagctatgctgcaagct
gatgatgaagatgaaatgatggaaatgcagatgaaaagtccatttggctcatcgtttagg
acctttaatgctacagactacaaacccattgccactatagatgtgaagaggaacatattt
gacctctgcacagatacaaaagactgctatctggctgtgattgagaaccaagactctgtc
aacactgacactgtgtgtcgcctctatgaagtcggccggcagcgacttgcagaagaagag
gaggaggatgaggaagatcaggaggatgatgaccaagacgaagacgatgacgatgatgac
gattctgatgatgacgttgatacggatcctctcattgctgagctggaaaacgagaatgga
ggagaggatgatgacgatgacggcaatgaagcattatctccatccgatgaggaagtcgca
cgccttcttgaagacgatggagacgtcgaggaggacgatgacgaggatgaggatgaagag
gacgatgataatgaagaggatgactctgacaatgacgatgcagacctggaaggtgacaat
gacagctcggacaactccgatctggaggatgacatcatcttatccctaaatgagtga
DBGET
integrated database retrieval system
