KEGG   Oryzias latipes (Japanese medaka): 101166294
Entry
101166294         CDS       T02443                                 
Symbol
wdr1
Name
(RefSeq) WD repeat-containing protein 1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ola04990]
    101166294 (wdr1)
Domain-containing proteins not elsewhere classified [BR:ola04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   101166294 (wdr1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_TEP1_C eIF2A Beta-prop_HPS5 Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_RIG_1st Beta-prop_DCAF12 Beta-prop_WDR11_1st WD40_RFWD3 WDR54 Beta-prop_ELP1_2nd DUF5711 Beta-prop_IP5PC_F WD_LRWD1
Other DBs
NCBI-GeneID: 101166294
NCBI-ProteinID: XP_004068911
LinkDB
Position
5:complement(17031089..17043187)
AA seq 605 aa
MPYELKHVFASLPQMERGVAKVIGGDPKGNNFLYTNGKCVIIRNIDNPAIADIYTEHAHQ
VGVAKYAPSGFYIASGDASGKIRIWDTTQKEHMLKYEYTPISGKIKDIAWTEDSKRIAVV
GDGREKFGAVFLWDSGSSVGELSGHSKLINSVDIRQKRPYRLAAASDDTCGSFFEGPPFK
FKFTLRDHSQFVNCVRFSPDGNRFATAGADGQIFLYDGTTGESVGTLGGEKAHGGGIYAL
SWSPDSSQLISASGDKTVKLWDVGAGTAVTTFNLGSDVTDQQLGCLWQKDHLLSISLSGY
INYLDKNNPNRPIRTVKGHSKSIQCLTVHKKDGRSFVYSGSHDGHINYWDAETGQNDCFS
GKGHSNQVSKMVTNAANELVSCSMDDTLRYTKLDKKEYSASDVVKMDFQPKSVSVAGGIS
LAVCIGQVVLLKDKKKLFTLDNLGYEAEVGALHPSGTTAAVGGTDGKIRLYSIQGNTLKD
EGKTLEAKGPITDMAYSNDGAYLAVIDEKKAITAYSVPDGYSVKNEFYGHHAKPVSLAWS
PDNEHFATGGMDMMVYVWTLSDPDRRIKLADAHRLHHVSSLAWIDEHTLATTSHDASIKL
WTITY
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgccgtacgaactcaagcacgtatttgccagcctcccacagatggagaggggagttgcc
aaggtgatcggtggcgatcccaaaggaaacaacttcctctacactaatgggaaatgtgtc
atcatcagaaatattgacaacccggccattgccgacatttacactgagcacgcacatcaa
gtgggcgtggccaaatatgctcccagcggattctacatcgcatctggagatgcatcagga
aaaatccgtatctgggacaccacccagaaggagcacatgctcaagtatgagtacacccct
atctcagggaagatcaaggacattgcatggacagaagatagcaagaggattgctgttgtc
ggagatggacgagagaagtttggtgcagtgttcttgtgggactcgggttcatcagtggga
gagctttcaggccattcaaaattaatcaacagtgtggacataaggcagaagcgtccgtac
cgccttgctgccgccagtgatgacacctgcggatctttcttcgaaggacccccgttcaag
ttcaagttcacactgagggaccacagccagtttgtcaactgtgtccgcttctctccggat
ggaaatcgcttcgccacagccggtgctgatggtcagatttttctctatgatggaacgact
ggtgaaagtgttggaactcttgggggcgagaaggctcacggtggaggaatttacgcgctc
agttggagtcctgacagttcccagttgatctccgcctctggggataagactgtgaagctc
tgggatgttggtgcaggaacggctgtcaccacttttaacctgggctctgatgtgacagac
cagcagctgggctgcctttggcagaaagaccacctcctcagcatctccttgtctggatac
atcaactacctggacaagaacaaccctaaccgacccatacggacagtcaagggtcacagc
aaatccatccagtgtctgacggttcacaaaaaagacgggcgatccttcgtttattcgggg
agtcatgacggacacatcaattactgggatgctgaaactggccaaaatgactgtttctca
ggaaagggccacagtaaccaagtgagtaaaatggtgaccaacgcagccaacgagctggtg
tcgtgcagcatggatgacacacttcgctacaccaaactcgacaagaaagagtacagtgca
tcggatgtggtaaagatggatttccagcccaaaagtgtgtctgtagctggaggaatatca
ctggctgtgtgcatcggacaggtcgtcttgctgaaggataagaagaagctcttcacatta
gacaatcttggctatgaagcagaggttggagccctccatcctagtggcaccacagctgca
gtgggaggaacagatgggaaaatccggctgtactcaattcaaggcaacactctcaaagat
gagggtaaaactctggaagccaaagggcccatcacagacatggcctactccaacgacgga
gcctatctggctgtcattgatgagaagaaagctattacagcctacagcgtgcctgatgga
tactctgtaaaaaatgagttttatgggcaccatgcaaaaccagtgagcctggcgtggtca
cctgataatgagcactttgctactggagggatggatatgatggtctacgtttggacactg
agtgatccagaccgcaggatcaaacttgcagatgctcatcgcttgcaccatgtcagcagc
ctggcctggatagatgagcacaccttagccaccacttcccacgacgccagcatcaagctg
tggacgattacatactga

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