Oryzias latipes (Japanese medaka): 101166307
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Entry
101166307 CDS
T02443
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein isoform X2
KO
K10890
fanconi anemia group C protein
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
101166307 (fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ola03400
]
101166307 (fancc)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
101166307 (fancc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
Motif
Other DBs
NCBI-GeneID:
101166307
NCBI-ProteinID:
XP_020561464
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All DBs
Position
9:8971860..9003110
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AA seq
633 aa
AA seq
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MTELQQPLSQLQETSEPLLDAQKMQFWLDKAVAWDQAGGAHAQKDILRHLRGLTDFLKQV
LAQISNIGSTAESMKELPFLGQIVGRLCWNPYVTVGDTNRGLLLQCLWGLYSENPSNAVE
RKANQWIRKVLCRLATEEENPAAEILMKSTGVPPKEYHLRVLKKMVKQHQENIGKTCCPK
KSTDPSCRCSCDVIQTTSEAFVPLIDCPEASPVICSLLQHPGTSFTDALSEDFLDALNST
DSNLALDETALVSVWYHSLPRLEEAVLDLLESVISTGSAPQNLEQQVLKTQLPKACAHHC
SMFLVVNDIFRSILRQAEGNLVVQSVIQTFTRCFLKELEELEPQTSTSLKAFFPQSPPSL
LVPLLTLPSEMPQEAWKNHLEWLTASLQRLTEQEEEEEDSQSSRSHHNGFETWFLLVQCS
HWVQVAGELLVTSEAEPCSPLLWLLTFYYHPTNRWHCRAAHLEEAKKAWSHLHALSSSSV
VSPTADHLQPLITLLSPKPQPPSPAPLLTLSLTVYSAVFCRLPHSQSVEFFHTVVHAAGL
HHEAACVLRSLQHRLNEGSCSSSDTVHVRITKLQSTVTHMQAGGNSHTALNSRAQEDTPA
VTKLSVKKQPLAHVRPLAEFPHNINASHSAEAE
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgacagagctgcagcagccattgagccaactccaagaaacttcagagcctttgctggat
gctcagaagatgcagttttggctggataaagctgtggcctgggaccaggctggcggtgca
cacgctcagaaagatatcctccgacatttgaggggcctgacggatttcctcaagcaagtt
ctcgcacagatcagcaacataggctccacagcagaaagcatgaaggagctgccctttttg
ggccagattgtaggccgcctgtgctggaacccttatgtcactgtgggagatacaaacaga
gggctgctcctccagtgtctgtggggactgtactccgagaaccctagcaatgctgtggaa
agaaaagccaaccagtggattaggaaagtattatgtcgactcgcgacagaagaagaaaat
cctgcagctgaaatacttatgaagagcactggtgttccacctaaagagtaccatctgaga
gtactaaaaaagatggtaaaacagcatcaggaaaacatcggaaagacctgttgtccaaag
aagagcacagatcctagttgcaggtgctcatgtgatgtgattcagacaacatcagaggcg
tttgtcccccttatcgactgtcctgaggcttctcctgtcatttgctctttgctacaacat
cctgggacatccttcacagacgctctgagtgaagacttcctcgatgctctaaactcaaca
gattcaaacttggccctggacgagacggctttagtctctgtgtggtatcacagtcttcct
cgtctggaggaggcggtgcttgacctgctggagtctgtgatcagcacaggctcagcacca
cagaacctagaacagcaagtactaaagactcaactgcctaaagcttgtgctcatcactgt
tcgatgttcctggtggtaaatgacatcttcaggtcaatccttcgacaagcagaaggaaac
ctggttgttcagtctgtcatccaaacctttaccaggtgtttcttgaaggaactggaagag
ctggagcctcagacgtccacatctttgaaagccttcttcccgcagtcaccccccagtctg
ctggtccccctcttgactttgccatcagagatgcctcaagaggcttggaaaaatcacctg
gagtggcttactgcctcattacagcgactgacggagcaggaggaggaggaggaagacagc
caaagctccaggagccaccataatgggtttgagacctggttcctgctggttcagtgctcc
cactgggtgcaggtggcaggggagctgctggtcacatcagaggcagagccctgcagtccc
ctcctgtggctgctgaccttctactaccaccccaccaacaggtggcactgcagagcggca
catctggaagaggccaaaaaggcgtggagtcatctgcacgctctctcctcctcctcagtc
gtttctcccactgctgaccacctgcagccacttatcactctgctgtcccccaaacctcag
cctccatcaccggctccactgttgaccctcagcctcacagtttattccgcagttttctgc
cggctcccacacagccagtcggtggagtttttccacacggtggtgcatgcggctggcctg
caccatgaagcagcatgtgttctccgctcactgcagcacaggctgaatgaaggaagctgc
tcatcaagtgacacagttcatgtcaggattacgaaactgcagagcacagtaacacacatg
caggcaggtgggaactctcacacagccctcaacagcagagcccaggaggacactccagcg
gtgacaaagctcagtgtaaagaagcagccgctcgcacatgtccgcccactcgctgaattt
cctcacaatataaacgcctcacactctgcagaggctgaatga
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