Oryzias latipes (Japanese medaka): 101166338 Help Entry 101166338         CDS       T02443                                  Symbol synpo2 Name (RefSeq) synaptopodin-2   KO K24066   synaptopodin-2 Organism ola  Oryzias latipes (Japanese medaka) Pathway ola04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ola00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     101166338 (synpo2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:ola04990]     101166338 (synpo2) Domain-containing proteins not elsewhere classified [BR:ola04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    101166338 (synpo2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 PDZ_2 Pept_S41_N_bact Motif Other DBs NCBI-GeneID:  101166338 NCBI-ProteinID:  XP_023804645 LinkDB All DBs Position 18:complement(10305478..10323531) Genome browser AA seq 1583 aa AA seqDB search MGTGDYVCVTLSGAAPWGFSLAEGEVDNQRSFLVSQVEQGGRAFLAGIQDGDVVVSINGK PCADLTLLRASALIDTSTDSLQLCLKRNVFIPAERLESEGRSLSSEVLESTTLNIFSPDH RFQLPKELYISESRHEADFGHSENDTDSPKTSQLCSVQQDTSSCENQGSNHEEGAEWSVS PGDILELQVSLSKQTLSDAGSTALGSAHGIEGEFSKREVIKALHKTTATSLCTPCPVREP LGQHGVVVTPTSMLGQVEVILQQPAASGAGRGILSVGGPKVSESLGSQSERQEGGGISEG VPGSFTISFKTPSEEASGEEQGSDSEGDQEKPSKHHARHARLRRKDSISEKQLKEAKSKC KRIALLLTAAPSNPNNKGVLMFKKHRQRAKKYTLVSYGTGEDEQEYSDEEDEENGDIKQE IPAAEITFLATINSATDKTFIRDATSSKCVLNFNLDKALMDIEQNLQNQAEMECLPETKG KGALMFAQRRLRMDEISAEHEELRRQGMPVEAVQETNKRAAELSFMQSATEGRTYMDVNI HQQSQQQYQQYQEQQYYEQQQNYQQQHQYQQFQQQQYEQSQYQQQQIYQQQQQQQQQQQY LQEQKQMQQYPAIINGTNQQQANEIQSSFNNLSAKPFAAENMVATPYSHGASGTIQDFAA QGEQIASRDERISTPAIKTSFLQDARRRNTGKPMFTFKEAPKMSPNPELLNLLNRSDKKL GFESGPEEDYLSLGAEACNFLQSQRVKPKIPPPVAPKPVINPNSPAWSPQIEAANQNMPQ CAENSISTPAVAPTENTAPTPELEPTIAPAVEHPPPLAPHETPANAVTEKQHAWPPTETE SQQQPLQVTLPEENMEMKPSLQAESSQKTTWIAKQAQTQQQSPAGWHPPQVKEPPSGQTP TQPSWVTHQPAQSQAQPQTPTSTWTPQSQPNWSHPQGQIQSQPQPPWIKPQEEPQSQQQH QVQSSWAQTNEQQQSQQIQPAWLQTQEHPQQQAQNQWTHLSQMDSQQQAPWVQQPQQKVQ PPWVQQVQQEPQPQPPWVQQPQHQALQQSWAQPQASHQPQQTWVSGQPQHQLSVDAWGQS QIQVQVQPPWIQAAQPPSQPQPHPQPQPQPKANLNPWAPVPAQAQSQSQWAQHPLENNQH HMNSWNQEQNQPQHQPPWVQTPPTQSTPYPGWQQQISSTPPQPQGDTWAPAQTQLQTHVD SWTSQSQQTSTNVSVSKINNRPSPKPWQPLQNTSQNLATPPPPRRMQSFTIGQRPLPINP MATVLNPKSSPGSAFEMPVVKGKGADMFAKRQSRMEKFVVDSETVEANKASRSTSPAASL PNEWKYTSNVRAPPPRAYNPIQSPLYPPAASKQPAAASPSTKAKKKDQEKQTPAPKPLNV IDVMKHQPYQLDSSLFIFGPGAEAVKPPISKPSPPNPPNENQPITYGQTAPVQQTGPYSS PYPQQAFGMPMQPPMHDSLYQQAQANVYPYQQPSGGQYPQQYNQQYQQPAQPSYHPQSPQ PSNSPYSQPLQAAYQPANSPPYMAPPPVPYEQQSTSCYIAPSFPVVGRADSVSGGSNAAA PRPKFTANKSSAQVWKPAAAEKE NT seq 4752 nt NT seq  +upstreamnt  +downstreamnt atgggcactggagattacgtctgcgtaacgctgagcggagctgcaccctggggattctcc ctggcagagggagaagttgacaaccaaaggtcttttctggtctcccaggtggagcagggt ggccgggccttcctggctggaatacaagacggggatgtggtggtgtccatcaacgggaaa ccatgtgctgatctaacacttttacgagcatctgctcttatcgacacttcaactgacagc ttgcagttatgtctcaaaagaaacgtcttcatcccagcagaaaggcttgaatctgaaggg aggagcctgtcaagcgaggttctagaaagcaccacccttaacatcttctctccagatcac aggttccagttaccaaaggagctctatatttctgagtcccgacacgaggctgactttgga cattcggaaaatgacacagattcccctaaaacctcccagctttgttcagtccagcaagac acatcctcatgtgagaatcaaggaagcaatcacgaagagggagcagagtggtctgtctca cctggagacatactggagctgcaggtgtctctgtctaagcaaaccttgagcgacgcaggc agcacagccctgggaagtgctcatgggatcgagggggaattttcaaaaagagaagtcatc aaagcgctacacaagacgacggcaacatctctctgcacgccatgccccgtcagggagccg cttggccagcacggtgtggtggtcactccaacctcgatgctgggacaggtggaggtcatt ctgcagcagccggcagcatcaggagcagggaggggcatcctgagcgtgggtggcccgaag gtcagcgaaagccttggatcccaaagtgaaagacaggaaggaggagggatcagtgagggg gtcccggggtccttcactatctcatttaaaactccatcagaggaggcgtcaggagaagag cagggctccgattctgagggggatcaagaaaagcccagcaaacatcacgcaagacatgct cgactcaggcgcaaggacagcatttctgagaaacagttgaaggaggcaaagtccaaatgt aaacgtatagctctccttctcactgctgctccatcaaatcctaataacaaaggggtgttg atgtttaaaaagcaccgccagagggccaagaaatacactctcgtgagctacggcacaggg gaagacgaacaggagtacagcgacgaagaggacgaggaaaacggagacatcaagcaagaa atccctgctgctgaaatcacttttttagctactattaattctgcaacagacaaaactttt atcagagatgctacaagtagcaagtgcgtgctgaattttaatttggacaaagctctcatg gacattgaacaaaacttgcaaaaccaagcagagatggaatgtttgcctgaaaccaaaggc aagggtgccctaatgtttgctcagcgccgtctgaggatggatgagatttctgctgaacac gaggagctcaggcgccaaggaatgcctgtggaagcagtgcaggagacgaacaagagggct gcggagctctcatttatgcagtctgcaacagagggccgcacttacatggatgtaaatatt caccagcaaagccaacagcaatatcagcagtatcaagagcaacagtactatgagcaacaa cagaactaccaacagcagcatcaataccaacaatttcagcagcagcagtacgagcaaagt caatatcaacaacagcaaatctatcagcagcaacagcagcagcagcagcagcaacaatat cttcaagagcagaagcaaatgcagcagtatcctgcaatcatcaacggcacaaatcaacaa caagccaatgaaattcaaagttcctttaacaatctttctgccaagccttttgcagcagaa aacatggtggcgacaccctattctcacggggcaagtgggaccattcaggattttgcggct caaggagagcaaatagcctcccgtgatgagcgtatatctacccctgctatcaagaccagc tttctgcaggatgcaagacgaagaaatacgggtaaacctatgttcacatttaaagaagct ccaaaaatgtcccctaaccctgagctgctgaacctcctcaacaggagtgataaaaagttg ggctttgagtcaggaccggaggaagactatctcagccttggggctgaggcttgcaatttc ctccagtctcaaagagttaaaccaaagattcctccaccagttgctccaaagcctgtgatc aaccccaactctccggcttggtctccacagatagaagcagccaaccagaacatgcctcag tgtgctgaaaatagtatatccacacctgctgttgcccccactgaaaacactgcccctact ccagaactagagccaaccattgcacctgccgtagaacaccccccccctctcgctccacat gaaactcctgccaatgctgtaacagaaaagcagcatgcatggcctcccacagagacagaa tcccagcagcagcctttgcaagtgacacttccagaggaaaatatggagatgaagccttct ttgcaggccgagtcctcccagaagacaacttggattgcaaaacaagcgcaaacccagcaa cagtcacctgctggttggcacccacctcaagtgaaggaaccaccctcaggtcagactccc acgcaaccttcatgggtaacacatcagcctgctcagagccaagcacagcctcagactccc acaagtacttggaccccccaaagccagccaaactggagccatcctcaaggacaaattcaa agccagcctcagccaccctggattaagccacaagaagaaccacagtctcaacaacagcac caggttcagtcatcttgggcacagaccaatgaacagcaacagtcccaacaaattcagcca gcatggttacaaacccaagaacatccacagcaacaagcccagaaccagtggacacacctt tcacaaatggactcccaacaacaagccccatgggtgcagcaacctcagcaaaaagtgcaa ccaccgtgggttcaacaagttcagcaagaaccccagccacagccaccatgggttcaacaa ccacagcatcaggctttgcaacaatcgtgggcacaaccccaagcatcacatcagcctcag caaacatgggtctcaggacagcctcaacatcagctctctgttgatgcttggggccaatca cagatccaggttcaagttcagccaccatggatccaagcagcccagccaccatctcaacct caaccacatccccagccacagccacaacctaaagctaatctgaatccgtgggcacctgta cctgctcaggcccaatcacagtctcaatgggctcagcaccctcttgaaaataatcaacac cacatgaattcatggaaccaagaacaaaatcagcctcaacatcagccaccttgggtccaa acacccccaacccagtcaacaccatatccaggctggcagcagcaaatttccagtactcca ccccagccacaaggggatacatgggcacctgctcaaacacagcttcagacacatgtggac tcctggacttcacagtcacagcaaacatcgacgaatgtttccgtgtctaaaatcaacaac cgcccctctcctaaaccttggcagccactacaaaatacatcacaaaacctggccacgcct cctccacccagacgaatgcaatcatttactattgggcaaagaccattacctatcaacccc atggccacagtcctaaatcctaaatcttctccaggttcagcttttgagatgccagtggtt aaagggaaaggagctgatatgttcgccaagaggcagtctcgtatggagaagtttgttgtg gactctgaaactgtggaagcaaacaaggcaagccgatcaacatcaccagctgcttcttta ccgaatgaatggaaatatacttccaatgtacgtgctccccctccacgagcatataatcct attcaatctccattgtatcctcctgctgcatccaaacaacccgctgcagccagtccttca accaaagcaaagaaaaaagaccaagagaaacagacacctgcccctaagcctctaaatgtt attgatgtcatgaagcatcaaccatatcagttggattcttcactttttatctttggccca ggagcagaggctgtcaagccccccatttcaaaacccagccctcccaatccacctaatgaa aaccaaccaattacgtatgggcaaactgccccagtccagcaaactggaccatacagctcc ccgtatccccaacaagcctttgggatgcccatgcagcctccaatgcatgatagcctttat cagcaagctcaagctaatgtttatccttatcagcagccttcaggtggtcaatacccacaa caatataaccaacaataccagcaacctgctcaaccttcttatcatccccagtcccctcag ccttcaaactctccctattcacagcctctacaggctgcttaccagccagcaaacagccct ccttatatggcacctccgcctgtaccctatgagcaacaatccaccagttgctacattgcc ccgagtttccctgtggttggtagagcggattctgtatcagggggtagcaatgcagctgct cccaggccaaagtttacagctaacaaaagctcagctcaggtgtggaaacctgcagcggct gaaaaagaatga

DBGET integrated database retrieval system