Oryzias latipes (Japanese medaka): 101166345
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Entry
101166345 CDS
T02443
Symbol
usp9x
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ola01002
]
101166345 (usp9x)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101166345 (usp9x)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101166345 (usp9x)
Peptidases and inhibitors [BR:
ola01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101166345 (usp9x)
Ubiquitin system [BR:
ola04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101166345 (usp9x)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
DinB_2
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
101166345
NCBI-ProteinID:
XP_023806292
LinkDB
All DBs
Position
21:complement(6863512..6918403)
Genome browser
AA seq
2615 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQGQAPDAQSQPPLPQNQTSSPNSSNENSPVSPPDEQSQVDRPP
QLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQR
FFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMAT
NPHCKFHIYNGTRPSETVPAGAQLPDDELYARPPDPRSPKGWLVDLINKFGNLNGFQILH
DRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKEA
KNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEV
NKVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRF
VIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNA
SKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALNAHIKILDYS
CSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKRPIYIETNL
EGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQLSKEEQAEFDPQTVRPG
SRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLM
GDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDD
LELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKA
SYDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKH
ITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRAILNRIKANAAHTKVELFIGGEVVDPAD
DRKLIGQLSLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESC
LPGVIMSLHLRYISFLWQIADLGCSLNMPLLRDGARVLMKLMPPDNTTVENLRAVCLDHA
KLGENSLSPSLDSCFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGLPL
VLSMLTRNNFLPSADMETRRGAYVNALKIAKLLLTAVGFGHVKAVAEACQPNADGNIPVS
PINQATHDQALVLQSALQSIPNPASECMLRNVAIRLAQQISDENSICHQNFFQASKYIPD
ICVIRAIQKIVWASGCGTVQLVFSSNEEISRIYEKTNAAKEPDGEDEQVCCEALEVMTLC
FALMPTALDTLSKEKAWQTFIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFIT
LLFTVLGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVK
RTGETGVEETILEGHLGVTKELLAFQTPEKKYYIGSEKGGANLIKELIDDFIFPASNVYL
QYMKTGEFPTEQAIPVCSTPASINAGFELLVALAVGCMRNLKQIVDTLTDMYYSGGETLT
EWEYLPPVGPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMS
GDEKQENESNVDPRDEVFSYHHQFDDKPSSKSEDRKEYNIGVLRHLQVIFGHLAASRLQY
YVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQ
KICQGCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTV
KRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVN
PENQVIQQNEPSESTPPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFD
DGDVTECKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDK
DSDLVKYISDLTISTKPHQVKMPTVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNS
VYLNPPPGQDHLLPEAEEIAMISTQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHS
KNVRYWFAHNVLFAYPNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPTASPG
PSAQGCDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKSQLLKLNV
PATFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCEVSSRMQSSINGNPPLPNPYGD
PNLTAPVMSVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFCCWENPQFSSTVLSEL
LWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQ
KRAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNN
WSPPVQSNETSNGYFLERSHSARMTLAKACELCPEELKCTQESPGKEPDEQEAPDDQDSS
PPEDTSLYPHSPGSTQFQQNNHPHGQPYTGPAAQHMNNPQRPGPASAPTPGPAQTPASGP
GTAPGSGPRAQEHWEGTEEVAPAPASTPAPVPPKE
NT seq
7848 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctctccagtggggggcaatgacagccagggccagggccag
gcacctgatgctcaaagccagcccccactgccacagaaccagacatcctctcctaactca
tcgaatgagaactccccagtgagcccaccagatgagcagagtcaggttgataggccccct
cagctggaggaggaagagcctgctttccctcacactgacctagccaagctcgatgacatg
atcaacaggcctcgttgggttgttccagttttgccaaaaggagaattagaagttctcttg
gaagctgctatagacctgagtaaaaaagggctggacgtgaagtgtgaggcttgtcagagg
tttttcagggatggtctgaccatttccttcacaaagatcctgacagacgaggcagtcagt
ggctggaagtttgagattcatagatgtatcattaataacacacaccgtttggtggagctg
tgtgttgcaaagctctctcaggactggttccctttattggagctgttagccatggccacc
aacccccactgcaagttccacatttacaatggcacacggccctcggagaccgtccctgct
ggcgcacagctgcctgatgatgagctctatgcccgaccaccagacccgcgatctcctaag
ggttggttggtggacttaataaacaaatttggcaatttaaacgggtttcaaatattgcac
gatcgcttcatgagcggccaagcactgaacgtccagatcatcgctgcacttatcaaacct
tttggccagtgttacgagttcctcacattgcacacagtaaagaagtacttccttccagtc
atcgagatggttcctcagtttctagagaatctcacggatgaggagcttaaaaaagaggcc
aagaacgaagccaaaaatgacgcactgtccatgataatcaagtctctgaagaatctggcc
tctcgtgtaccaggacaggaggagactgtgaagaatttagagatttttaggttaaaaatg
attcttaggttattgcaaatttcttcttttaatggcaaaatgaatgcactaaatgaagtt
aacaaagtgatctccagcgtgtcctactacactcatcgtcataaccccgaggaagaggaa
tggctgactgctgagcggatggcggaatggatccagcaaaaccacatactgtctatcgtg
ctaagagacagtttgcaccaaccccagtatgtggaaaaactggagaagattcttcgcttt
gttattaaggagaaagctcttaccatgcaagatttggacaacatctgggcagcacaggct
ggaaagcatgaggctattgtaaagaatgtccatgaccttctggctaagctagcatgggac
ttctcacctgagcagcttgatcatctttttgactgttttaaggcgagctggaccaatgcc
agcaagaagcagcgtgaaaagctgctggaacttatccggcgcttagcagaggacgacaaa
gacggggtgatggcccacaaggtcctcaacctgctgtggaacctggcgcacagtgatgac
gttcctgtagatattatggaccaggcactcaatgctcacatcaaaatattagactacagt
tgctcacaggacagagacacgcagaagattcaatggatcgatcgttttatagaggagctg
cgaaccaatgacaaatgggtgatccctgccttgaaacaaatcagagaaatctgcagcctc
tttggtgaagctcctcaaaatcttagaaagaaaaggccaatttacattgaaacgaactta
gaaggccaaacccagagaagtccacacgtgttttaccggcacgacctgatcaaccagctg
cagcataaccacgctctggtcaccctcgtggccgagaacctctctgcttacatggagact
atgaggcagctatccaaagaagaacaagcagagtttgatcctcagacagtcagaccagga
agccgctacagtcacgtccaagaagttcaggagcgactcaacttcctgaggtttctttta
aaagacggccagctgtggctgtgtgcccctcaagccaagcagatctggaagtgtctggct
gagaatgctgtgtttctctgcgatcgcgaagcttgcttcaaatggtactccaagctgatg
ggggatgaaccagacctggatccggacatcaataaggacttctttgagaataacgttctg
cagttggatccgtctctgctgacggaaaatggcatgaagtgctttgagaggttcttcaag
gccgtcaactgcagggaggggaagctggttgcaaagcgcagggcttacatgatggatgac
ttggagctaataggcctggactatctgtggagggtggtaattcaaggaagcgatgacatt
gctagccgagccatagacctgctgaaagagatttacaccaaccttggtcccaaactacaa
gtcaatcaggttgagattcacgaggatttcatccagtcctgcttcgaccgtctgaaggcg
tcttatgataccctttgtgttttggacggagacaaagacagcattaactgtgctaggcag
gaggccatccgcatggtacgcgttctgactgtgctcaaggagtatatcaacgagtgtgac
agcgactaccacgaggagagaaccatactgcccatgtccagagctttcaggggaaagcac
ataactttgattgtgcgtttcccaaaccaaggtcgccaagtagatgatttagatatctgg
tcccacaccaacgacacgattggctcggtgaggcgggcgattctaaacagaataaaggct
aatgctgcgcatacaaaggtcgagttgtttattgggggtgaggtggtggatccagctgat
gacaggaagttgatcgggcagctcagtctgaaggacaaaacgttgatcacggccaagctg
acccaggtgagtgccaacatgccctcaagtccagacagctcctctgactcgtctactggc
tctcctggtaaccatggaaaccactacagcgacgggcccaaccctgaggtggaaagctgt
ctgcctggcgtgattatgtcgctgcatctgcggtacatctccttcctgtggcagatcgct
gatctaggctgcagcctcaacatgcctctacttagagatggagctcgtgttctcatgaag
cttatgcctcctgataacaccacagtagagaatctgagagctgtgtgtttggaccatgcc
aagctgggagagaacagcctgagtccctcactggactcctgcttctttggcccctccccc
tcacaagtgctctacctcatagaggtcgtgtatgctttgctgatgccagccagtgccact
ctcggtgaagacgccagcgacttccaatacaacttcctgaagagcggcggcctgcccttg
gtgctgagcatgctcaccagaaacaactttctcccatcggcagacatggaaactcgaagg
ggcgcctatgtcaacgcactaaagatcgcaaagctcctactgaccgctgtgggttttgga
cacgtgaaggcggtagctgaggcctgccagccaaacgccgacggaaatattcccgtctct
ccaattaatcaggcaacgcacgaccaagcgctggttcttcagagcgccctgcaaagcatc
cctaacccggcctcagagtgcatgctgcgtaatgtagccattcgcctggcccaacagatc
tctgacgagaactctatttgccatcagaactttttccaggcgtcgaagtacatcccagac
atttgtgtaatccgagcaatacagaaaatcgtgtgggcatcaggctgtggtacagtgcag
ctcgtctttagctccaatgaggagatcagcaggatatatgagaagacaaatgctgccaag
gaaccagatggagaggatgagcaggtgtgctgcgaggccttggaggtcatgaccctgtgc
tttgccctcatgcccacggctctggacacactaagcaaagagaaggcgtggcagactttt
atcatagacctgttactacactgccacagcaagtccgttcgacaaatggctcaggagcag
tttttcctcatggccacaagatgctgcatgggccaccgacccctcctcttcttcatcacc
ctgttattcactgtgttggggagcacggccaaagagagagccaaacatgcgggggactac
ttcaccttgctcagacacctgctaaactatgcttacaacagcaacatcaacctgccaaac
gccgaggtgctgcttaacaatgagattgactggctcaagagaatacgggatgaggtgaag
agaacaggagagactggtgtggaggagacgatcctggagggccaccttggagtcaccaaa
gagctccttgcttttcaaacaccggaaaagaagtactacattggcagcgagaagggagga
gccaaccttataaaggagctgatcgatgacttcatattcccagcatcaaatgtttacctg
cagtacatgaagacgggagagttccccacagagcaggccatcccagtctgcagcactccc
gcctccatcaatgctggctttgagctcctggtggctctggccgttggctgcatgcgcaat
ctgaaacaaatagttgacaccctgactgatatgtactactcaggcggggagacgttgaca
gagtgggagtacttgcctccagttgggccacgacccaataaaggctttgtaggtctaaag
aacgccggtgccacatgttacatgaactctgtcattcagcaactgtacatgatccctccc
attcgcaacggcattctggctattgagggaacaggcacggatgtggacgatgacatgtcg
ggggatgagaagcaggagaatgagagtaacgtcgatcctcgtgatgaggtcttcagctac
catcaccagtttgatgacaaaccgtccagtaagtcagaggacaggaaggagtacaacatc
ggcgtgcttcgtcacttgcaggtcatctttggtcatcttgctgcatccaggctgcagtac
tacgtcccaagaggcttctggaaacagtttagattgtggggtgagccagtcaacctgagg
gaacagcacgatgctctggagtttttcaactctttggtggacagtttggatgaagctctg
aaggctctgggtcaccccgccatgctcagtaaggtgctgggaggctctttcgccgatcag
aaaatctgtcaagggtgccctcacaggtatgagtgtgaggagtcgtttacaacacttaac
gtggacatcagaaaccaccaaaacctgttggactccatggagcagtatgtcaaaggagat
ctgctggaaggagcaaatgcctatcactgtgagaagtgtaataaaaaggtggacaccgtg
aagcgtctgttgatcaagaagctcccacccgtcctggccattcagctgaagcgctttgac
tacgactgggagcgagaatgtgccatcaagtttaacgactactttgagttccccagggag
ctggatatggagccttacacggtagcgggcgtggccaaactggagggcgacgacgtgaac
ccggagaaccaggtcatacagcagaacgagccgtctgaatccacaccgccgggcagctcc
aaatatcgtctggtgggagtgctggtccactcaggccaggccagtggcggacactactat
tcctacataatccagaggaacggaggggacggggagaagaaccgctggtataagttcgac
gacggcgacgtcactgaatgcaagatggacgacgaggaggagatgaagaaccagtgcttc
ggtggggagtacatgggcgaggtgtttgatcatatgatgaaaaggatgtcgtatcggagg
caaaagcgctggtggaacgcttacatcctgttttacgagcgaatggactcgttggacaag
gacagcgatctcgtcaaatacatctcggacctgacgatctccaccaagccacatcaggtc
aagatgcccacggtcatcgagtgcagcgtccgcaagcagaacgtccagttcatgcacaac
cgaatgcaatacagcctagaatatttccagttcataaagaaacttctgacctgtaacagt
gtctatttaaaccctcctccagggcaagaccacctgctgccagaggcagaggagatcgcg
atgatcagcactcagctggctgctaggttcctcttcagcacaggtttccacaccaagaaa
gtagtacggggtcctgccagtgactggtatgacgccctctgcatcctgctgagacacagt
aagaatgttcgttactggtttgcacacaacgtcctgtttgcgtaccctaaccgcttctcc
gagtatttgctggagtgccccagcgctgaggtccgcggagcatttgccaagctcatcgtc
ttcatcgctcacttctccctgcaagatggcccctgcccctcccccaccgcctcacctgga
ccgtctgctcagggctgtgataatctcagtttaagtgaccacttgttgagagctgttcta
aacctgcttaggagagaggtttctgaacatggccgacatctacagcagtacttcaacctc
tttgtcatgtatgccaatctgggcctggcagagaagtctcagctgctgaagctcaacgtt
cccgccactttcatgctggtcgctctagacgagggtcccggtccccccatcaaataccag
tatgcagaactgggcaagctctacactgtggtttcccagctggtccgctgctgtgaggtg
tcctcgcgcatgcaatcctccatcaatggtaaccctcctcttcctaacccgtatggggat
cccaacctgacggctccggtgatgtctgtgcagcagctggtggcagaaatcctgtttgtg
aggacgagctacgtcaagaagatcatcgaggactgcagcaactctgaggagaccgtgaag
ctccttagattctgctgctgggagaatcctcagttctcctccactgtgctcagtgaactg
ctttggcaggtggcatattcttacacgtatgagctgaggccttacctggacttgctgcta
cagatccttctcatcgaagactcctggcagacgcacaggatccacaatgtcctaaagggc
atccctgatgacagagacgggctgtttgacaccatccagcgctccaaaaaccattaccag
aagagggcctaccagtgcatcaagtgcatggtggccctctttagcaactgctccgtggct
taccagatcctgcagagtaatggtgacctgaaaaggaagtggacgtgggcggtggagtgg
ttgggggatgagttggagagaaggccgtacacaggaaacccgcagtacacctacaacaac
tggtcccccccagttcagagcaacgagacctccaacgggtatttcctggagcgttcacac
agtgcacgtatgacacttgccaaagcctgtgaactctgtcctgaagagctcaagtgtaca
caggaaagcccagggaaggagccggacgaacaggaagcacctgatgatcaagactcctcc
cctcctgaagacacctctctgtacccacattctcctggaagcacccagtttcagcagaat
aaccacccccatgggcagccttacaccgggcctgctgcccagcacatgaacaacccccag
cgccccggcccagcctccgctccgactcccggcccggcccagacccccgcctcaggcccc
ggcaccgcccctggttccggcccgcgagcacaagagcactgggagggcacagaggaagtc
gcccccgcccccgcctccaccccagcacctgtccccccgaaggagtaa
DBGET
integrated database retrieval system
