Oryzias latipes (Japanese medaka): 101166390
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Entry
101166390 CDS
T02443
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
101166390 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ola01002
]
101166390 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101166390 (usp30)
04121 Ubiquitin system [BR:
ola04121
]
101166390 (usp30)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101166390 (usp30)
Peptidases and inhibitors [BR:
ola01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101166390 (usp30)
Membrane trafficking [BR:
ola04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
101166390 (usp30)
Ubiquitin system [BR:
ola04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101166390 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
101166390
NCBI-ProteinID:
XP_020561595
LinkDB
All DBs
Position
9:12972627..12978722
Genome browser
AA seq
499 aa
AA seq
DB search
MLWLRHRSCDKLVGRFLGTGSVIRNKMIKNWGVIGGIAAAVAAGVYVLWGPITVKKKRKK
GMSPGLLNLGNTCFLNALLQGLAACPSFVRWLEKFSGLPSIQSCKDNQLSTTLLQLLKAL
SSDEPGEDVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVITSSLEEERDRQPKVTHLFD
VQFLESFPNQDDKALTCISRAPLHPLPGSWKFQHPFHGRLTSNMSCKRCETQSPVRYDSF
ESLSLSILLPQWGRPISLDQCLQHFISSETIKEVECENCTKLQQHSSINGQLLESQRTTF
VKQLRLGKLPQCLCIHLQRLMWSNEGSPIKRQEHVQFSEYLSMDRYKHDSSTLRTQRVRC
APKTIKAESFDSIEKSMANGTEHHNNNKPFLNGTCSSMFLGSGVKNPFGLTHHDNSSAEY
LFQLVAVLVHLGDMHSGHFVTYRRSPSSSRSSSNFSSQWLWVSDDSVRKASLQEALSSNA
YMLFYERVQKPALGQQLEE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggctcagacatagaagctgcgataagcttgttgggaggtttcttggcaccgga
tccgtaatcagaaacaaaatgatcaaaaattggggcgtcatcggggggattgcagctgct
gttgcagctggagtttatgtcttgtggggcccgattacagtgaaaaagaagagaaagaaa
ggcatgtctccgggtctgctgaatctgggaaacacctgctttttgaacgctttgctccaa
ggcctggcagcgtgtccgtccttcgtcaggtggctggagaaattttcaggtttgcctagc
attcaatcatgcaaagacaaccagctgtcgacaacgctgctgcagctactcaaagctctg
agtagcgatgaacctggagaagatgttcttgacgctggttgcctccttgatgtactcaga
ctgtatcgctggcacatcagttcttttgaagagcaggatgctcatgagctttttcatgtc
atcacatcctctctggaggaggagcgagatcgtcaacctaaggtcacacatttgtttgat
gtgcagtttcttgagagttttcctaatcaagatgacaaagctcttacctgcataagcaga
gccccccttcaccctttaccaggatcttggaagtttcaacatccttttcatggccggtta
accagcaacatgtcatgcaagcgctgtgaaacgcaaagtccagtgcggtacgactcattt
gaaagcctttctttgtccatcctgttacctcagtggggtcgcccaatctcactagatcag
tgtctgcagcactttatttcctcagaaaccatcaaagaagtggaatgtgaaaactgcaca
aagcttcagcaacattcatcgataaacgggcaacttctagaaagccagaggacgacattt
gttaaacagctgagactaggaaagctccctcagtgcctttgcatccatttacaaagactg
atgtggtccaatgaagggtctcccatcaagcgacaggagcacgtgcagttctcagagtat
ctatcaatggatcgttacaaacacgacagctccacactgaggacgcagagggtcagatgt
gctcctaaaaccatcaaagcggaaagttttgattccatagaaaagtccatggctaatggg
acagaacatcataacaacaacaaaccttttttgaatggaacctgttcttctatgtttctt
ggttctggggttaaaaatccatttggcctcactcatcacgacaacagttctgcagagtac
cttttccagctggtggctgttctggttcatctcggcgacatgcactcgggacactttgtc
acgtatcgccgcagcccctcctcctctcgcagctcttcaaacttcagctcccagtggctt
tgggtgtcggacgactcggtgcgtaaagccagcctgcaggaggcgctgtcctccaacgct
tacatgctcttctatgagagagttcaaaagcccgcactaggccaacagttggaggaatga
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