Oryzias latipes (Japanese medaka): 101166396
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Entry
101166396 CDS
T02443
Symbol
uvssa
Name
(RefSeq) UV-stimulated scaffold protein A isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
101166396 (uvssa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ola03400
]
101166396 (uvssa)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
101166396 (uvssa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
Ribosomal_L20
Motif
Other DBs
NCBI-GeneID:
101166396
NCBI-ProteinID:
XP_011478847
UniProt:
H2M5A6
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All DBs
Position
10:27398269..27436653
Genome browser
AA seq
764 aa
AA seq
DB search
MELPQRERTAELIEELTTSGQGQLNPDKMKELKKICKVSNDCIDHVYHLLMSQLNQDHCE
IRLSAFQIASELFSRSHHFRTLLVDNFQEFLELTVETDTEQPLPPPKEVAKKLRSLAIQT
VQSWQASYGSAYKKLALGYHFLKQVKKVDFQDLEARTISERRREEERQRKMERIYKARVE
AAAKEMEESYQEMESTLTEMESCLRLLLPEFGVADFQTDTSSHSNTQPASEGLPDVQQPC
CSKALTDVETESGIRGREDGPEEENRTPAGNKNQDTGNEEEEKTFTDCSDPPKKGTENKE
HNKEEKRQSEVKDGSEEGESSEEEESVEECLPLRSSGLISHAYSLDLNLSPGLHVKETED
NEAVVSTVIELHKLIQTKHLPAVQGWVQVFTKSRADEQLLRRALDLKRSLEGAVQKHKEL
HIDYQTRSCREKTDTSDDDDDDFDEVPEKEGYEPHIPEHMRAEYGLDPSPSTSTAQPKQK
RPPVKRPAPPPPQTTSRRLMRLLEEQQDPTSAAATLSLLRQKISLPHQSSSSSGAASSSS
QSASGQQAAQAPVVPFGLDLYYWGQEQPNAGKIIKSASQHQFWVPAEVEEEVENKELLEQ
SKSRYISFPGRFVPVSHFCRAPLGSGKLCQRQDRLKCPFHGPIIPRDEEGRPCRPEDRQR
EEQEERRKREQEPDWRDAELMRDIEAATGEDLGSDRLGGKKKKGKKKKKYPNLSDLKQSS
DTSRSRLERKVFNKSTMRRVAQVLSKADRRKHDKFSNQFNYALN
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggagttaccccaaagggagaggacggcagagctcatagaggagctgaccacatctgga
cagggtcaacttaacccggacaaaatgaaggagctgaagaagatctgcaaagtgtcgaat
gactgcatcgatcacgtgtaccacttgctgatgtctcagctcaaccaagaccactgcgag
atccgactgtcagccttccagatagccagtgagctcttttccagatcgcaccacttcagg
acactgctggtcgacaactttcaggagttcttggagctgactgtggagacggacacggag
cagcccctccctcctcccaaagaagtagccaagaagctgcggtcactggccatccagacc
gtccaatcatggcaagcctcttatggctctgcttacaagaaactggctctgggctaccac
ttcctcaaacaggttaaaaaggtggactttcaggatctcgaagcaaggacgatatcagag
agaaggagggaggaggaaagacagaggaagatggagaggatctacaaagccagagtggag
gcggcggccaaagaaatggaagagtcctaccaggaaatggagtcgacgctcacagagatg
gagtcctgcttgaggcttctcctgcccgagtttggggtggcagatttccagacggacacc
agcagccactcaaacactcagccggccagcgagggtctgcctgatgtccagcagccctgc
tgcagtaaagccctgacggacgtcgagacagagtcaggaatacgaggaagagaggacggg
ccagaggaggagaaccggactccagcgggaaataaaaaccaggatacaggaaatgaggaa
gaggagaaaacatttacagattgttctgatcctcctaagaaaggaactgaaaacaaagaa
cacaacaaggaggagaaaagacagagtgaagtgaaagatgggagtgaggaaggagaaagt
agcgaggaagaggagtctgttgaggagtgtttgcctctgaggagctctgggctcatttct
cacgcttacagtctggacctgaacctcagtcctggtcttcatgtgaaggagacagaagac
aacgaggcggtggtttccacggtgattgagctccataaactgatccaaaccaaacacctt
ccagctgtgcagggctgggtccaggttttcacaaagtcgcgtgccgacgagcagctgctg
agaagagcgctggacctgaagaggtctctagagggcgctgttcagaagcacaaagaactt
cacatcgactaccagaccagatcctgcagagagaagacggacacctcagatgacgacgac
gacgattttgacgaagtgccagaaaaagaaggctacgagccgcacattcccgagcatatg
cgtgccgagtacggtctggatccttctccgtccacctccaccgcccaacctaagcagaaa
aggcctcctgttaaacgacccgcgcctcctccacctcaaaccacctcccggcgtctgatg
agacttttagaagaacaacaggatcccacctctgcagctgccactctgagcctcctcagg
cagaagatctctctgccccaccagtcaagcagctcctctggagccgcttcttcttcttct
cagagcgcttcaggccaacaggcagctcaggctccagtggttccgttcggtttggacctc
tactactggggtcaggagcagcccaacgctggcaaaatcatcaagtcagcctcacagcat
cagttctgggttcctgcagaggtggaggaggaggtggagaacaaggagctgttggaacag
agcaagagccgatacatctccttccccgggaggttcgtccctgtcagtcacttctgccgg
gcgccgctggggagcgggaagctgtgccagcggcaggaccgcctcaagtgtcccttccac
ggccccatcatcccccgagacgaggagggccgaccctgcaggccagaagaccggcagagg
gaggagcaggaggagaggaggaagagggagcaggagcctgactggcgagatgcggagctg
atgcgcgacatcgaggcagcgacgggggaggacctgggctccgatcgcttgggcgggaaa
aagaagaaagggaagaagaagaagaagtaccccaacctgagcgacctgaagcagagcagc
gacacgtcccggtccagactggagaggaaagtcttcaacaagagcaccatgcgcagagtg
gctcaggtgctgagcaaagccgacaggaggaaacacgacaagttctccaatcagttcaac
tacgccctcaactga
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