Oryzias latipes (Japanese medaka): 101166400
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Entry
101166400 CDS
T02443
Symbol
lhx5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101166400 (lhx5)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
101166400 (lhx5)
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GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
101166400
NCBI-ProteinID:
XP_004074682
UniProt:
H2L9K6
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Position
12:3168026..3187633
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AA seq
396 aa
AA seq
DB search
MMVLCAGCERPILDRFLLNVLDRAWHAKCVQCCDCNCNLTEKCFSRDGKLYCKMDFFRRF
GTKCAGCLQGISPNDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKEDYL
SPGSIKEVSLNSVSSCTDRSLSPDLPDPTQDDIKETDNSTSSDKETNNIENEEQNSGAKR
RGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRGPRRMRPLGGRLEDPDILGPGAYGYYGEYQGDYYGPGINYDFFPHGP
PSSQAQSPAESPYILGSGPGAMEGSGHHPSDDQRFTDMISHAETPSPDPSLPSSLQPVPG
EAYGGGPSPPFSLASNSSYSAPMSHQGQEMGEAAAW
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcctgtgcgccggctgcgagcggcccatcctggaccggttcctgctcaacgtg
ctggaccgagcctggcacgccaagtgcgtgcagtgctgcgactgcaactgcaacctgacg
gagaagtgcttttcccgggacgggaagctctattgcaaaatggactttttcaggcggttt
ggcacaaagtgcgcgggctgccttcagggaatctcccccaacgacctggtgcgcaaagcg
cgcagcaaggtgttccacctgaactgcttcacctgcatggtgtgcaacaagcagctgtcc
acgggcgaggagctctacgtgatagacgagaacaagtttgtgtgcaaagaagactacctg
agccccggaagcatcaaagaagtcagcctaaactcggtgtcctcgtgcacggacaggagt
ttatccccggatctgccggacccgactcaggacgacatcaaggagacggacaattccacg
tcctcggacaaggaaacgaacaatatcgagaacgaggagcagaactcgggggcaaagagg
cgggggcctcggaccaccatcaaggccaagcagctggaaacgttaaaggcggcgtttgta
gccacgccgaagcccacgcggcacatccgggagcagctggcgcaggagacggggctgaac
atgcgcgtcatccaggtctggttccagaatagaaggtccaaagaacggcgaatgaagcag
ctgagtgctctgggggcccgacgccacgctttcttcaggggtccgaggaggatgcggcct
ctgggaggccggctggaggatcccgacattttaggacccggagcttacggttactacgga
gaataccaaggtgactactatggacctgggatcaactacgacttcttcccccatggcccc
ccgtcctcacaggcgcagtccccggcggagtctccctacattttgggctctgggcctgga
gccatggagggatcgggacaccacccgtcagacgaccaaaggttcacggacatgatctct
catgcagaaactcccagccccgacccaagcttacccagttcccttcagccggtgccgggg
gaagcgtacggaggtgggcccagcccccccttttccctggccagcaattctagctacagc
gctccaatgtcccatcagggccaagagatgggagaagcagcggcgtggtaa
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