Oryzias latipes (Japanese medaka): 101166476
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Entry
101166476 CDS
T02443
Symbol
farsa
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101166476 (farsa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ola01007
]
101166476 (farsa)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ola03016
]
101166476 (farsa)
Enzymes [BR:
ola01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
101166476 (farsa)
Amino acid related enzymes [BR:
ola01007
]
Aminoacyl-tRNA synthetase
Class II (U)
101166476 (farsa)
Transfer RNA biogenesis [BR:
ola03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101166476 (farsa)
Prokaryotic type
101166476 (farsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
ARM_FBXO47
HTH_47
Motif
Other DBs
NCBI-GeneID:
101166476
NCBI-ProteinID:
XP_004071891
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All DBs
Position
8:22198753..22211571
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AA seq
495 aa
AA seq
DB search
MADSASVEALLQHVEKADGGVDSLDVASSIGVDHQVIVGAVKSLQSLGDVISAEQRSSKH
WELTDEGTELAEQGSHEARVFGSIPLEGLPQSELMKLSFGKIGFSKAMSNKWIRVDKSHE
GGPRIFRSVENIQDQVREKLLLVRSGAQLEEKDKNELKKRKLLTEVTVKSYWITRGSSFS
TTLTKQETELTPEMIATGSWKDRKFKPYNFEAMGVAPDCGHLHPLMKVRTQFRQIFLEMG
FSEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFLSDPALAHEFPQDYLERVKTVHSE
GGYGSQGYKYDWKMEEAQKNILRTHTTAVSARMLYKLAQQEKFTPVKYFSIDRVFRNETL
DATHLAEFHQIEGVVADYGLTLGDLMGVLHQFFTKLGITKLRFKPAYNPYTEPSMEVFSY
HEGLKKWVEVGNSGVFRPEMLLPMGLPEDVSVIAWGLSLERPTMIKYGINNIRELVGHKV
NLQMVYDSPICRLDS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcggactccgcatctgtagaggcgcttctgcagcatgttgagaaggcggacggcggc
gtggacagcctggatgtggcgagcagcatcggagtagaccaccaggtcatcgtcggagcc
gtgaagagtcttcagtcgcttggagacgttatctcagccgaacagcgttcctcgaagcac
tgggagctgaccgacgagggcacggagttagccgagcagggcagccatgaagcccgggtc
tttggctccattcctctggaaggtctgccgcagagcgaactcatgaaactgtcctttggg
aagatcggcttcagcaaggccatgtccaacaagtggatccgggtggacaagtcccacgag
ggggggcccaggatcttccgaagcgtggagaacatacaggaccaggtgagggaaaagctg
cttctggtgcggagcggagctcagctggaggagaaggacaaaaacgagctgaagaagagg
aagctgctcaccgaggtaacagtgaaatcttattggatcaccagaggaagctccttcagc
accaccctgaccaaacaggagacggagctcacgcctgagatgattgccacaggcagctgg
aaggaccgaaagtttaaaccctacaactttgaggccatgggcgtggctccagactgcggt
cacctgcacccgctgatgaaggtgcgaacacagttcaggcagatcttcctggagatgggt
tttagtgagatgcccacaaataacttcatagaaagctccttctggaacttcgactccctc
ttccagccgcagcagcaccccgcccgggaccagcacgacaccttcttcctgtcagaccca
gcacttgcccacgagttccctcaggactacctggagagggtgaagacggtccactcagag
gggggctacgggtctcaagggtacaaatatgactggaagatggaagaggctcagaagaac
atcctccgcactcacactacagcggtcagcgcacgcatgctctataagctggcacagcag
gagaagttcactcccgtcaagtatttctccatcgatcgggtcttcaggaacgagaccttg
gacgccacccatctggcagagtttcaccagatcgagggggtggtggccgactacggcctg
acgctgggggacctcatgggcgtcctgcaccagttcttcaccaaactaggaatcactaaa
ctgcgcttcaaacctgcatataatccgtacacggagcccagcatggaggtgttcagctac
catgaaggactgaagaagtgggtggaggtgggaaactctggcgtcttcagaccggagatg
ctgctgcccatggggctgccggaggacgtgtcggtcatcgcttggggcttgtctctggag
agacccaccatgatcaaatacggcatcaacaacatccgagagctggtgggacacaaggtc
aacttgcagatggtctacgacagccctatatgccggctggactcttaa
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