Oryzias latipes (Japanese medaka): 101166481
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Entry
101166481 CDS
T02443
Symbol
abcb3
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola02010
ABC transporters
ola04145
Phagosome
ola05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101166481 (abcb3)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101166481 (abcb3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101166481 (abcb3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ola02000
]
101166481 (abcb3)
Enzymes [BR:
ola01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
101166481 (abcb3)
Transporters [BR:
ola02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
101166481 (abcb3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
AAA_30
AAA_29
AAA_16
ABC_ATPase
Rad17
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
101166481
NCBI-ProteinID:
NP_001265816
UniProt:
Q8UUM0
LinkDB
All DBs
Position
11:complement(15838558..15844501)
Genome browser
AA seq
711 aa
AA seq
DB search
MADRMIRKVVALMLALCLDLSLFYASDRFSFFGHVARLWLSAALRWSAVSFTVQVILGDL
KPVLIRYITGHSLLQAVFESGSRTLHGEDSLCGRAADARCWLMFTGAALGAALFWETTIP
DADDAAETKEEKQKSRVLFMRVLRLFKPDCLLLLAGLLFLCLAVLCEMFIPFYTGRVIDI
LGSHFEQNEFLSALLFMGLYSVGSSVSAGCRGGVLMCAISSFTCRMKVKLFEALTKQEIG
FFETIKTGEITSRLSKDTTLMARTVCLNANVLLRTFIKTVGMISLMMSLSWKLTLLVLME
TPITGLIQNIYDTKYQRLFQDMQNSMARTNDTANEVVFGIRVVRSFHTETQEASRYDKRL
METHSLKKRRDTVRAIYLLARRLTGLAMQVFILYYGRLFIQKGQMTTGNLVSFILYQSDL
GVNIRTLTYIFGDMLNSVVAAGKVFEYLDRTPQISTDGKLKPDEMKGHVTYRHLSFAYPS
NPSRTVLQELSLELKPGQMTALVGPSGEGKSTCVSLLQRFYEPQNGEILLDGNPLRSYDH
HYFHKKVTAVSQEPVLLSGSIRDNITYGLSNCSMEEIKEAACKANAHDFIMKLDQGYDTE
VGEGGGQLAKSERQRIGIARALIRKPQVLILDEITSSLDIENENKVLQALANRPNQTLVV
IAHSLKTIERADQIVVIIGGKVKEKGTHQELMDLKGVYYKLKEELFTERTN
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaggatgatccgtaaagtggtcgctctgatgttggcgctttgtctcgatctc
agcttgttttacgcgtcagatcgtttcagcttcttcggtcatgtcgcgcgtctgtggctg
tctgcggctctgcgatggtcagctgtttctttcactgttcaggtcattcttggagacctt
aagccggttctgattcggtacataacagggcacagtcttctccaggcggtgttcgagagc
ggcagcaggacgctgcacggtgaggacagcctctgtggacgcgctgcggacgcgcgctgc
tggctgatgttcaccggagcggcgctgggcgctgcgctcttctgggagaccaccatcccg
gacgcagacgacgctgctgagaccaaagaggagaaacagaagtccagagttctgttcatg
agagttctccgcctgttcaagcccgactgcctgctgctgctggcaggattgctgttcctg
tgcctggctgttctctgtgagatgttcatcccgttctacacagggagagtcatcgacatc
ctgggaagtcactttgaacaaaatgagtttctatctgctctcctgttcatgggcctgtac
tctgtgggaagttctgtgagtgccggctgcagaggaggtgtgttaatgtgtgccatcagt
tcattcacgtgcagaatgaaggtgaagctgtttgaagccttgaccaaacaggaaatagga
ttttttgagaccataaagacgggtgaaatcacatccaggttgtctaaagatacaacactg
atggcaagaacagtgtgcctgaatgcaaacgtcctgctgaggaccttcatcaagaccgtc
ggcatgatctccctgatgatgagtctgtcatggaagctcacgctcctcgtgctgatggaa
accccaatcactggtctcatccagaacatctatgacacaaaataccagaggttgttccag
gatatgcaaaactccatggctcgtacaaatgacaccgcaaacgaggtggtgtttggtatt
cgagtggtacgaagtttccacacggagacgcaagaggccagtcgctatgacaaacgcctg
atggaaacacacagtctgaagaaacgtcgagacacagttagagccatttacttactcgca
cggaggttgacaggattggccatgcaggtgtttatattatactatggaagacttttcatc
cagaaaggacagatgaccacaggaaacctggtttccttcatcctctaccagtctgatcta
ggggtcaacatcaggaccctgacctacatctttggtgacatgctcaactcagtagtggca
gctggaaaagtctttgagtatctggacagaacgcctcagatcagcacagacggaaaactc
aaaccagatgaaatgaaaggtcacgtcacctatcgccatctcagttttgcttatccttca
aatcccagcagaaccgtgctgcaggagttgtctttggagctgaaaccgggtcagatgaca
gctttagtgggtccatcaggagagggaaagagcacctgtgtgagtctgctgcagcgattc
tatgagcctcagaacggagaaattcttctggacgggaatccactgagatcctatgatcac
cactatttccataagaaggtcactgcagtgagccaggagcctgtgctcctctctggttcc
atcagagacaacatcacttatggactttctaactgctccatggaggagatcaaggaagca
gcctgcaaagccaacgcccatgacttcatcatgaaactggaccaaggatatgacaccgag
gtcggtgagggcggcggtcagctggccaagagtgagagacagcgaatcggcatcgccagg
gctctgatcaggaaaccccaggtcctcattctggatgaaataaccagctctctggacatc
gagaatgaaaataaggtcctgcaggccctggccaaccgcccaaaccagactcttgtggtg
atcgctcacagtctgaagaccatcgagagggcggatcagatcgtggtgataattggaggg
aaagttaaagaaaagggaactcaccaagaactgatggatctaaagggagtctactacaaa
ctgaaagaggagctcttcactgaaaggaccaactaa
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