Oryzias latipes (Japanese medaka): 101166504
Help
Entry
101166504 CDS
T02443
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04020
Calcium signaling pathway
ola04080
Neuroactive ligand-receptor interaction
ola04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
101166504
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101166504
04082 Neuroactive ligand signaling
101166504
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101166504
Ion channels [BR:
ola04040
]
Ligand-gated channels
Glutamate (ionotropic)
101166504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
101166504
NCBI-ProteinID:
XP_023805425
LinkDB
All DBs
Position
19:13953755..14028821
Genome browser
AA seq
1385 aa
AA seq
DB search
MTIHRGYFSTSLWPHIFLLLVSSPLLRARPLLIHSSINVAVVFSGSSYQNEVRGRLSGEN
FVDLPVVVSPVTVLVNDTNPRDLLTRLCDTMATEKLHGVVFEDDVGLGVGAQVAEVAQIL
DFLSTQTALPIVGISGGSAVVIPFKAEGSSFLQMGASLEQQVISMFKILEEYDWGEFAVI
TSLLPGYDTFVDIVQSYTDTSYFLWDLQDVMTLEMSVGANDLKTKRMLQQVDSQVLLAYC
SHDEAQYLFRQAAEVGLLGPGYIWILPSLAVGNPNSPPPASFPVGVIGVITDQWRKSLRQ
RVREGVAIVAKGAEGFKRDYGFIPEGYGDCSKPAKQFDNNTLFRHMLNVTWERKDLSFNS
QGFLSNPSMVIITLDRERQWDKVGTFARGILQVRYPIWPRYGSFLEHVSDDRHLTVATLE
EHPFVMVENVDPGTGTCVRNTVPCRRQSNYTESVFGPTESYTKLCCKGFCIDILKKLSRN
IKFSFDLYLVTNGKHGKLVHGVWNGMIGEVRNAQLPQRADMAIGSLTINEERSEIIDFSV
PFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNR
SLVSAKAPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYT
ANLAAFMIQEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHTHMM
RYNQKGVEEALQSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALV
KDSRWKRPIDLALLQFLGDGDTERLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLV
AMGLSMVVFAWEHLLYWKLRHSLHKSDKVDFLLAISRGIYSCFKGVEDPGRSSGLAKPDL
TSNYAQANMLKMLRTAKDLVSTANVESSLDNATKTIEHLTRHGGSLPVRVPQITTEAVPG
GFAYVTENHCSLPQRAFSPPLTGVSSLKQERSVTRPTPLRYTLPTRSSTCLYDRPLPVSS
LSSPHLAMVDPHQHPQHYQTTGRIYVDSHSQSPFISYTDLPNMYASHPVSSPQNQHIQLS
FSQRKRRSRSFQCENGDVEMRKHGEQRKSDKSSIGFSELKANQLQENHLSAPSVDNIYTG
EGMCPRVENYSSWPPEDLVLRGRRRHRRPSFLKATWGGEDIHPLDESQSSLSSQPSTLPD
LFPCVQTSLTSAKTYNPAHLRNNLCLPRNQAYLHIREDQRKPNGRKAQRLRYSHSTHLPT
YGEAVRHGTGFGRGMVRRATSLLNRQYTHYLNSYPGLPLYHGPLDLQHHSQASSPVCQLL
ACGSGRCGGQRALLYQDSVYGAYGAYQGSQIGTEAQGGQGAGAQLAGSPCVLRPWRRVSS
LESEV
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgaccattcacagaggatatttttccacctctctgtggcctcacatcttcctcttgctc
gtctcctccccgctgctgcgtgcccggcctctcctcatccactcgtccattaacgtggcg
gtggtgttcagcggttccagctaccagaatgaggtcagaggtcgtctcagcggggaaaac
tttgtggatctgccggtggtggtcagcccagtgactgtcctggtcaatgacacaaacccc
cgagacctgctaacccgcctctgcgataccatggcaacggagaagctgcacggggtggtc
tttgaggatgatgtgggcttaggtgtgggtgctcaggtggctgaagtggctcaaatcctg
gatttcctctctactcagacagctctgccaattgtgggcatcagcggaggctctgcagtg
gtcattccgttcaaggctgaaggatcctcctttctgcagatgggggcttctctggagcag
caggtcatctccatgtttaagatcttggaggagtacgactggggcgagtttgctgtgatc
accagtttgctgccaggctatgacacctttgtggacatagtgcagtcatacacggacacg
tcctacttcctgtgggatctgcaggacgtcatgactttagaaatgtctgttggagcaaat
gacctgaagaccaaacgcatgttgcagcaggtggactcccaggtcctgctggcgtactgc
tctcacgacgaggcgcaatacttgttccgtcaggcagctgaggtgggtctgttgggcccg
gggtacatctggattctccccagcctggccgtaggcaatcccaacagccccccacctgcc
agcttccctgtgggtgtgattggtgtgattacagaccagtggaggaaaagcttgaggcaa
agggtgagggagggtgttgccattgttgccaaaggggcagaaggtttcaagagggattat
gggttcattcctgaaggatacggggattgcagcaagccagcaaaacagtttgacaacaac
acactgttcaggcacatgctgaatgtgacgtgggaaaggaaagatttgtcgtttaacagc
caaggcttcctctccaacccgtccatggtcatcatcactttggaccgagaaagacaatgg
gacaaggttggaacattcgctcggggcatccttcaagtccgctaccccatctggccgcgg
tatggcagcttcctggagcatgtgtctgacgaccgtcacctgaccgtagccaccctggag
gagcatccctttgtcatggttgagaacgtagacccgggaaccggcacatgtgtgcgcaac
actgtgccctgcaggcgtcagtccaactacacagagagtgtttttggccccacagagtct
tacaccaaattgtgctgcaaaggtttctgcatagacatcctcaagaagctgtcccgaaac
atcaagttctcctttgacctttatttggtcaccaatggaaaacacggcaaactggtccac
ggagtttggaacggcatgatcggggaggtgagaaatgcacagctgcctcaacgagccgac
atggccatcggctctctgaccatcaatgaggagcgctctgaaattatcgacttttctgtg
ccatttgttgagacgggcatcagcgtgatggtagcacgcagtaacggaacggtatcccca
tctgcttttcttgagccgtacagtccagcagtctgggtcatgatgttcgtgatgtgcctg
accgtggtggctgtgaccgtatttgtgtttgaatacttcagcccggttggctacaaccgc
agtttagtgagcgccaaagctcctggcgggccaaccttcacaattggaaagtctgtgtgg
cttttgtggggcatcgtttttaacaactccgtccccattgaaaaccccaaaggaaccacc
agtaaaatcatggtgctggtctgggccttttttgccgtcatctttctggcttcttatact
gccaacctggcggctttcatgatacaggaacaatacatcgacacagtgtcaggcctctct
gacaaaaagtttcaaaaaccacaggagcattaccctccttttcgctttgggacggtccca
aatgggagcacagaaaggaacatacgcagcaactatccagacatgcacacacacatgatg
agatacaaccagaagggcgtggaggaagcgctgcagagcctcaaaactgggaaactggat
gccttcatctatgatgctgccgttttgaactacatggctggcaaagatgaagggtgcaag
ctggtgacgataggtagcggcaaagtgtttgccactactggatacggcattgccctcgtg
aaagattcgcgctggaaacggcctatagatctggctctgctacagttccttggagatgga
gacactgagcgattggagacagtctggctgtctggtatctgccagaatgagaaaaatgag
gtgatgagcagtaagttggacattgacaacatggcaggtgtcttctacatgctgctggtg
gctatgggcttaagcatggtggtttttgcatgggaacatctgctctactggaaactaaga
cactccctccacaagtctgacaaagttgacttcctgttggccatcagcaggggaatttac
agctgtttcaaaggagtggaggatcctggccggtcatctggtttggccaaacccgacctt
acctcaaattatgctcaagcaaatatgcttaagatgcttcgcactgccaaggatctggtg
tccaccgccaatgtagaaagctctctggacaatgctaccaagactattgagcacttgact
cgtcatggtggcagcttgcctgttcgtgtgccacaaattaccactgaggctgtgccagga
ggcttcgcttacgtcacagaaaaccattgctctcttcctcagcgcgccttttccccacct
ctaactggcgtcagctctctgaaacaggagaggagtgtcaccaggccaacgccactgcgc
tatacacttccaactcgctcttctacctgtctgtatgacagacctcttcctgtgtccagc
ctgagcagccctcatctagccatggttgaccctcatcagcatccgcaacactatcaaacc
actgggcgtatctatgtggactcccactcccaatcaccatttatctcctacactgatctg
ccaaacatgtatgcatctcatccagtctcctctcctcaaaaccaacatatccaactgagc
ttttcccaaaggaaaagaaggtccaggagttttcagtgtgagaatggtgatgtggagatg
agaaaacatggggagcaaagaaaaagtgacaaaagttctataggttttagtgagcttaaa
gctaaccaactccaagagaaccatttgtctgctcctagtgttgataacatttacacgggg
gagggcatgtgtcctcgggttgaaaactacagctcctggcccccggaggacctagtgtta
agagggaggcgccggcaccgtcggccctcttttcttaaagcaacttggggaggtgaggac
attcacccacttgacgagtcccagtcctctttgtccagccaaccttcaaccctgccagac
ttgtttccatgtgtccaaacctcattaacgtctgctaagacttacaacccagctcatctt
cgaaacaatctgtgcctgccaagaaaccaggcctacctccacattagagaggaccagagg
aaacctaatggtcgaaaggcccaaaggctacgctactcccactccacccatctcccaaca
tacggagaagcagtgcgacatggaactgggtttgggcggggtatggtacggagagccaca
agcttacttaaccgacagtatactcactacctgaactcataccccggactccccctctac
cacggccctctggacctgcagcatcacagccaggcttcaagtcctgtgtgccagctattg
gcatgcgggagtggaagatgtgggggccagcgggccctgctttatcaggacagcgtctat
ggggcctatggggcgtatcagggatcccagattggaaccgaagctcaaggaggacaggga
gcaggtgcccagctggcaggaagcccttgtgtacttcgaccctggcgaagggtgtccagt
ctagaatcagaagtctga
DBGET
integrated database retrieval system
