Oryzias latipes (Japanese medaka): 101166585
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Entry
101166585 CDS
T02443
Symbol
shroom4
Name
(RefSeq) protein Shroom4 isoform X1
KO
K18625
protein Shroom
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
101166585 (shroom4)
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
101166585 (shroom4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASD2
PDZ
PDZ_6
PDZ_4
Motif
Other DBs
NCBI-GeneID:
101166585
NCBI-ProteinID:
XP_011485947
LinkDB
All DBs
Position
18:complement(21122316..21185150)
Genome browser
AA seq
1841 aa
AA seq
DB search
MDRQERMETVEQLVSFLHIQVQLSGGAPWGFTLKGGLEHGEPLIIIKMEDEGKAAQCKKL
KVGDELININGSPLYGSRQEALILIKGSYRILKLTVRRRSVPLIRPHSWHLAKLPEPPLP
LPPPSPATPPCIPTADSPPLILPSPLTAMHPHPGPYTLPRHTTDNSDLPIQWALLSRPNS
STDRGSSLGSVESLDTPTLPIQSYSNSLTPPVDSTLFSNKRDSAYSSFSASSNMSDYATV
PLKPGEANSMNNLLQSFEPTYQDYPCDTLALGRTSGNSLSEANLSVQKSRSLTRPRPRPN
EEKDRPFSCLCEKQLRELDLDIFHIEETVGNKKITPPQPPTRKDSFRATRSRPTVSEEHT
LALSDNVCPSHEEGSNSSLNTKWRIESVPVTEDKKHKHSEDETVDSDFIQTHTQHCKELR
CDSCNDSETDSNVDLLLEASSPSKEPIIIPGSTSLSSELDDHEQSFVIRHQTKKSSTLLH
RHSAPGKLLAAQLQLLELNTNSCSLAPQNPSEIFEYSSSLCGSQQFNLSVPHPKTEDKGT
FHSSFLKSNQVGSSQRSSPESLFSEEDSKNLSERQGVVNVNVSSLPHGHHQMPLNRSASV
PDDPIRSISQEGLSPVLLVNSKFLPIGGAASVDNLVKEAVDADMRRTSEKKEDDRAECVN
KSDSLRTNRQNRRRSERFATNLRNEIQRKKAQLQHSHGSDRLPCSGETVHEEGLELNEEE
DPKGSVKRKSSKGTLVSPQISQVSQTSATPKNLNMSSGSRCDVLQTQPTTFSLNNNPPRQ
VQNADPNTRRFGVGIRVVEEIAPVGKARRWRWTPEHKLQPQTDGDRPCEVPGGRVLGVTG
SIHGVCAFTSSFTPYCSGSPSYFQMEECDILPFADRMKFFEETSKGTAMPSVSNMSIHRQ
KKHMYRSENHAGELSTKQRKFSYQGGPLQESIQSQNSVEFRRRSVSTITERQNEMDREQE
KSRERELKLREMEKFERDLLKDSGRLKETEQEREQEGHDRQRLRIKQTELGSGKDDKGRV
QSYIKQRGKELEGGKSTEKDEDYPLVLCHECCTNFAMTERNQGFQQMHNHPNCHANQQTS
HCCQTQNHVFRSAFHLVSPPEQPMESQQSFSQKYRTRSYTPTEMYHSKQLGASKLSRNYS
LSERNYPSWSEKSKPLQRSDQHQTQQSRCNVLQAQSGPDNFHFSPTFTPPSFLRGRAMSE
NDLSFDPSKHWSSQISAATIQVLTEVEEGAVLFGRDAEGTTKQIRKKTPPPPRPPPPKWE
QYYQRRASHHALLSCAAARLSNPHPFDNAEPPSFAPNPPPDTSRQRSYSLPLERQEVSEG
YLPCRCNHIKPQEHGCCHAQPNQNEAISQGSCYPLPQPTPVFSEQLFRPVAVPHMDRMND
VREQTPAPTPTPPLPTESGASSSSSLSVVHSQDRVKVEKPSERPGSYQERIPSPDGYSNP
PPPTDGFPPESNLNQISTEQQKELLIKKSFPVEEQHTLSKSEPEPELLSPSPAYSLESDL
NVPMETDIDDFQEEEEPPKMDEMISSELPCFALPVTVLETDIDTLLLHPACTMQSESCTA
EKKMECGESSMDRLSLQDLLLQNREADSGGETCKGPFQAEGGDTSSLERRSGASSSSSFY
STSGSTDQLFSQMKDFTDNKDWEDDNELSYKRQLLQSLRKKLGVLREAQRGLQEDIKANS
QLGDEVESMVVSVCKPNEVEKFHMFIGDLDKVLSLLLSLSSRLLKVEALMDALNPDTDHH
ERLRLLEKKRQLTRQLSEAQDLKEHIDRREQAVSRVLGRCLTPEQHKDYSHFVKMKAALL
VEQRQLEDKIRLGEEQLRGLRESLGLGLGIAKGIQMGYGHY
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atggaccggcaggagaggatggagaccgtcgagcagctggtgtccttcctccacattcag
gtccagttgagcgggggcgcaccctgggggttcacgctgaaaggagggctggagcacggc
gagccgcttatcatcatcaaaatggaggatgaaggaaaggctgctcagtgcaaaaagctg
aaagttggtgatgaactcatcaacataaacggatctcccctgtatggcagccggcaggag
gccctcatccttataaagggatcgtacaggatactgaagctcacagtacggaggcggagc
gttcccctcatcaggcctcactcgtggcacctggcaaagttaccggagccccctctccct
ctgccacccccgagtccagccacgccgccctgcatcccaactgcagattcccctcctctc
attcttccttctcctttaactgccatgcatcctcaccctggcccctacacactccctcgg
cacacgactgacaacagtgatttgcccatacagtgggctctgttgtccagaccaaactcc
tccacagacagaggcagctctctcggctctgtagagagcttggacacaccaacacttcct
atacaatcatattctaattccttgactccacctgttgactccaccctattcagcaacaaa
cgggactctgcctatagctctttctccgccagctcaaacatgtctgactacgccactgta
ccactaaagcctggtgaagccaattccatgaataatctgcttcagagctttgagcccact
tatcaagactacccttgtgataccttagccctgggcagaacatctggcaatagcctaagt
gaggctaatctgtctgttcaaaagtccagatctttgaccaggccaagaccaaggcccaat
gaagaaaaagataggcctttttcctgcctttgtgagaagcagttgagggagctggattta
gatattttccatattgaagaaactgtaggtaataaaaagataaccccccctcagcccccg
accagaaaggacagttttagagcaactcggagtcgtcctaccgtcagcgaagagcacact
ttagctcttagtgacaatgtctgtccatcacatgaggagggaagtaactcttctctgaac
actaaatggaggattgaaagcgttccagttacagaagacaaaaaacacaaacattctgaa
gatgagactgtggactctgattttatccagacacatacacaacactgtaaagaactaaga
tgtgactcttgtaacgattctgagacggatagcaatgtagatctcctcttggaagcctcg
tctccctccaaagaaccaattatcattcctggctccacttccttgtcatctgaactggat
gaccatgagcagtcttttgtcatccgtcaccagacaaagaagtcttctacattgctccac
agacacagtgcccctgggaagcttctggcagcacaacttcagttattggagcttaacaca
aacagctgttctttagcgccccaaaacccatcagagatttttgaatactcatcatctctc
tgtggcagccagcagttcaatttgtcagtaccccacccaaaaacagaggacaagggaact
ttccacagcagttttctaaaatcaaaccaagtgggaagtagccaacgttcaagtccagaa
tctttgttctcagaagaagattccaagaatttaagtgagaggcagggggttgtgaatgtc
aatgtaagttcccttccccatggccaccatcagatgcctttaaatcgttctgctagtgta
ccagatgatcccattagatcaatatctcaggagggtctaagccctgtccttctggtgaac
agtaaatttcttcctattggtggtgctgccagtgtggataatttagtaaaggaggcagtg
gacgcagacatgagaagaactagtgaaaaaaaagaggatgatagagcagaatgtgtgaac
aagtcggactcactaaggaccaatcgtcaaaatcgtcggcggagtgaacgatttgctacc
aacctccgcaatgagattcagaggaagaaggctcaacttcagcatagtcatggatcagac
aggttaccgtgcagtggagaaactgtccacgaggaaggtttagaacttaacgaggaagaa
gacccaaagggttctgtcaaaagaaaaagtagcaaaggaacattagtctcacctcaaatt
tctcaagtttctcaaacatcagctacacccaagaatttaaacatgtcaagtggatcacgg
tgtgatgttttacaaactcagccaacaaccttttctctgaacaataacccacccaggcag
gtccagaatgcagacccaaatacacgaagatttggtgttggcatcagagttgtagaagaa
atagctcctgttgggaaggctcgtcgttggcgttggacccccgagcataaactacagcca
caaacagatggagatcgaccatgtgaagtcccgggtgggagggttctaggggtaacgggg
tccattcatggagtttgtgcgttcacgtcttcatttaccccttactgcagtggctcccct
tcatattttcaaatggaggaatgtgacatccttccatttgctgacagaatgaaatttttt
gaggagacaagcaaaggcacagctatgcccagtgtctcaaatatgtcaatccacagacag
aaaaagcacatgtaccgttcagagaaccatgcaggggagctcagtacaaaacagaggaag
ttctcttatcagggaggacctttacaagaaagtatccagtctcaaaacagtgtagagttc
agaagacggtcagtaagtaccattacagagagacaaaacgagatggacagagaacaagaa
aaatcaagagaaagggaattaaaattaagggagatggagaaatttgagagggatttacta
aaagacagtgggaggctgaaggagactgagcaggaaagggagcaagaggggcatgatagg
caaaggttgaggataaaacagacggagcttggaagcgggaaagatgataaaggccgcgtt
caatcgtatatcaagcaaagagggaaggagcttgaaggaggcaaatccacggagaaagat
gaagattatccgctcgtcttgtgtcacgagtgttgcactaattttgccatgacagaaaga
aaccaaggcttccaacaaatgcacaaccatcccaactgccatgccaatcaacagacttcc
cactgctgtcaaacccagaatcatgtctttcgatcagcctttcatctagtcagccctccg
gaacagccgatggaatctcagcaatcatttagtcagaagtatagaacaaggagctacaca
cccacggagatgtatcactccaagcaactgggggcaagcaagctcagcaggaactacagc
ctgagtgagagaaattacccaagttggagtgagaagtccaaaccactacagcgaagcgat
cagcatcagacacagcagagtcgctgcaacgtcctccaggctcagagcggcccagacaat
ttccacttttctcccactttcacgcctccgtcctttcttcgagggcgagccatgtctgaa
aacgacctgagctttgaccccagcaagcactggtcttcacagatttctgctgccaccatc
caggtcctgacggaggtagaggaaggggcagttctttttggaagagatgcagaaggtact
accaagcagatcaggaagaagacaccccctcccccaagacccccgcctccaaagtgggag
cagtattaccagaggcgtgcgtctcaccatgcgctgctgtcctgtgctgccgctcgcctt
tcaaacccccacccctttgacaacgcagagcctccctccttcgcccccaaccctccacct
gatacatcccgacagagatcctacagtctccctctagagagacaggaagtgtcagagggt
tatctgccatgcaggtgcaaccacatcaaaccccaggaacatggatgctgtcatgcccag
cccaaccagaatgaagccatctctcaaggcagctgttatccactccctcagcccactcct
gtgttctccgagcaactcttcagacctgtggctgtgccccacatggataggatgaatgat
gtacgggagcagacgccggcacctacaccgacacctcctctgcctacagaatctggtgcc
agcagttcatcatccttgagtgtggtccacagtcaagacagagtaaaagtggaaaagccc
agcgagagacctggatcttatcaggagagaatcccctcccctgatggttacagcaaccca
cctcctcctacagacgggtttcctcctgaatctaaccttaaccaaatcagcactgagcag
caaaaggagctcttgattaaaaaaagcttcccggttgaagagcagcatactctttccaag
tcagaaccagagccagaacttctcagcccaagccctgcttacagcttggagagtgacctg
aatgttcccatggaaaccgacatcgatgactttcaagaggaggaggagcccccaaagatg
gatgagatgatcagcagtgagcttccatgctttgctctaccagtcactgtcctggagaca
gacatcgacaccctcctgcttcatcctgcatgcaccatgcagtcagaaagctgcactgca
gagaagaagatggaatgtggtgagagcagcatggacaggctgagcctgcaggacctcctc
ctgcagaacagggaggcagattccggtggggagacctgcaaagggcccttccaggctgag
gggggtgacaccagcagcctggaaaggaggtccggtgcaagctccagttcatccttctac
agcacatcaggatctacagatcagctgttttcacagatgaaggactttacagacaataaa
gactgggaggatgataatgagttaagctacaagagacagctgctgcagagccttcgcaag
aagcttggagtgttgagagaggctcagaggggcctgcaggaggacatcaaagccaactcg
cagctgggagatgaggtggagagcatggtggtgtctgtgtgcaaacccaacgaggtggag
aagttccacatgttcatcggggatctggacaaggtgctcagtctgctgctgtccctgtcc
agccggctgctgaaggtggaggctctgatggatgctctgaacccagacacggaccaccat
gagaggcttcgcctgctggaaaagaaacgtcagctcacgaggcagctgtcagaggctcag
gacctgaaggagcacatagaccgaagagagcaggccgtgagccgggttctggggcgatgc
ctcacgccagaacagcataaagactacagccactttgtgaagatgaaagccgctctgctg
gtggagcaaaggcaactggaggacaagatccgactgggagaggagcaactgaggggacta
agggagagccttgggctgggtttgggaatcgccaagggaatacagatgggatacggacat
tactga
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integrated database retrieval system
