Oryzias latipes (Japanese medaka): 101166635
Help
Entry
101166635 CDS
T02443
Symbol
ung
Name
(RefSeq) uracil-DNA glycosylase isoform X2
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101166635 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ola03400
]
101166635 (ung)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
101166635 (ung)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
101166635 (ung)
Prokaryotic type
101166635 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Itf52_C
EthR_C
DUF6374
Motif
Other DBs
NCBI-GeneID:
101166635
NCBI-ProteinID:
XP_004072432
LinkDB
All DBs
Position
9:12980815..12983968
Genome browser
AA seq
297 aa
AA seq
DB search
MIGQKTINSFFSPVSKKRLSQETNKTTEDDIEPKKPKIAAVDPEPQSSPLSPEQLDKIAR
NKKAALEKLASGLTPQGFSESWRRELWSEFSKPYFKDLTKFVSDERKRGTVYPPAEQIFT
WTQMCDIRDVKVVILGQDPYHGPGQAHGLCFSVKRPISPPPSLENMYKELVSDIEGFKHP
GHGDLTGWAQQGVLLLNAVLTVRAHQANSHKDKGWEVFTDAVVQWLSNNLQGLVFLLWGS
YAQKKGSAINRKHHHVLQAVHPSPLSAHRGFFGCKHFSKANELLKKSGKSPIDWKAL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgattggacagaaaactattaactcctttttctcgccggtttcaaaaaagaggttgtct
caggagacgaataaaacaacggaggatgatattgagccaaagaaaccgaagatcgctgca
gtggacccagaaccgcaaagttctcctctgtctccggagcaactggacaagattgcccgc
aacaagaaagccgcgctggagaagctcgcttccgggctgacgccgcaggggttcagcgag
agctggcgcagggaactctggtctgagttttccaaaccatattttaaagatctgacaaag
tttgtttctgacgagaggaagcgcggtactgtgtacccacctgccgaacagatcttcacc
tggacccagatgtgtgacatcagagacgtcaaggtggtgattctgggacaggatccgtat
cacggtccaggtcaagcgcatggattgtgtttcagcgtgaaacgacccatttctcctcca
cccagcttggagaacatgtacaaagaactggtttctgatattgaaggctttaagcatcct
ggtcatggagatctcactggatgggctcaacagggtgtgctcttgctgaacgctgtgctg
accgttcgagcacaccaggcaaactcccacaaagacaaaggttgggaggtctttactgat
gctgtggttcagtggctcagcaacaacctacaaggcctagtcttcctcctctggggatca
tatgctcagaagaaaggatctgccatcaataggaaacatcaccacgtgctgcaggcggtg
catccttctcccctgtcagcacatcgaggattttttggttgcaaacacttttcaaaggcc
aatgagctgctaaagaaatctggaaagtctcccattgattggaaagcactttaa
DBGET
integrated database retrieval system
