KEGG   Oryzias latipes (Japanese medaka): 101166672
Entry
101166672         CDS       T02443                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    101166672
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ola01009]
    101166672
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ola03021]
    101166672
Protein phosphatases and associated proteins [BR:ola01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101166672
Transcription machinery [BR:ola03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     101166672
    Little elongation complex (LEC)
     101166672
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing A_deaminase_N
Other DBs
NCBI-GeneID: 101166672
NCBI-ProteinID: XP_004082541
UniProt: H2MFM1
LinkDB
Position
22:complement(8574589..8586416)
AA seq 610 aa
MSVLEEDRCYGLRSGKVSLASNQSVFHVKLTDSAARAISSLQDGKGCALHPSICFNGSQG
RITIPCSDNKDEVRIFTFSVANVARSSPHGSFDCIRQFSNSAAEELSCLGVIQKKMTINA
TDDSYDKARQSMAQAEEETRSRGTIVIKNGGRYQGKKVTVRAPAPALAKLTKPKHSSHSL
LSNIRRRISVSKKSPCPSNGKSGDVVQRPLRERIMHVLALRPYKRPELILRLQRDGLTGE
EKDGLESALSEVAQLSGRDNTFVLKESFYKDLRKDWPGYTPGDQQLLKRVLVRRLFQPQQ
NLLTVPKAQVSPLRDTPNSSPAHRFKHSLVEDFTDVSTSKKPRISHLSNKSSCKRSLLTL
NEQGNQRDTEGKAKDERWDSLDAEKLLDSLLATSNEETAKRLEPTESAQQASEGHATPQP
NRSPSLVSTPDLQCTDQKGKEREKLKHILEGWKTKKERRKDLSSDDESTDATQACTELNR
GSDDAEAYADMSDYLSKYTSICSHSQRQSYKQDFNKEYSEYRDLHARIDHTTRQFLELES
QLKQLHRGSLKYKTVHNKILQKYRKIKKSNPSYNQDKVRCEYLHNKLAHIKKLISDFDQQ
QLTADRSCPE
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgtcggtgctcgaagaggaccggtgttacggtctgcgcagcggtaaagtcagcctcgcc
agcaaccagtcggtttttcacgtaaaactcactgacagcgcggcgagagctatcagctct
ctccaggacggcaagggctgcgctcttcatccgagcatctgttttaacggaagccaaggg
agaatcacaataccttgttcggacaataaagacgaagtcaggatctttaccttcagtgtg
gccaatgttgcgcggagcagtcctcacgggagctttgactgcattaggcagttcagcaac
agtgctgccgaggagctgtcatgcctcggagtgattcagaagaagatgactatcaatgcc
accgatgactcgtacgacaaagctcgccagagcatggcccaggcagaagaggagacgcgc
agccgaggcaccatcgtcatcaagaacggaggacgctaccaggggaagaaggtgactgtg
cgagcgccagctcctgccctggccaagctgaccaaacccaaacactcttctcactccctc
ctgagcaacataaggcggcggatcagcgtgtcaaagaagagcccctgcccatcaaacggg
aagagtggcgacgtggtacagaggcctctcagagagaggatcatgcatgtgctggctttg
aggccgtataagagacctgagctgatcctgaggctgcagagagacggactgacgggggaa
gaaaaagatggactggagtctgcgctatcagaggtcgcccagctcagcggcagagacaat
acctttgttctgaaggagagtttctacaaagacctgcggaaagactggccgggctacacg
ccaggagaccagcagcttctgaagcgcgtcctcgtcaggaggctctttcaaccacagcag
aacctcctcacagtccccaaggcccaggtcagccccctgcgggacacccctaactcctca
ccagcccaccgtttcaagcactctctggtggaggatttcactgacgtttctaccagcaag
aagccccgaatatcccacctgtccaacaaatcctcctgtaaaaggtcattgctgacgctg
aatgaacaagggaatcaaagagacactgaagggaaagcaaaggacgagcgctgggattcg
ctcgatgctgaaaaacttttagattccctgttggcaacttccaatgaggaaacggctaaa
aggctggagccaacagagtcggctcagcaggcctctgaaggtcacgccaccccccagccc
aatcgatccccctcccttgtgtccacacccgacctgcagtgtaccgatcagaaagggaag
gaaagggagaagctcaaacacatacttgaggggtggaaaacaaagaaagaacgaagaaaa
gatctgagttcagatgacgaaagcacagacgccacccaggcctgcacagaactgaacaga
ggatcagacgatgcagaggcttacgctgacatgtcggactatttatcaaaatacacaagt
atttgcagccacagccagagacagagctacaaacaggacttcaacaaggagtacagcgag
tacagagacctgcatgctcgcatcgaccacaccacgcggcagttcctggagctggagtct
cagctcaaacagcttcaccgcggctcgttgaaatacaagacagttcacaataaaatcctt
cagaaatatcgcaaaattaagaagtccaatcccagctacaaccaggacaaggttcgctgt
gagtatctgcacaacaaactggctcacatcaagaagctcatctccgacttcgaccagcag
cagctgacggcagaccgctcgtgtccagaatga

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