KEGG   Oryzias latipes (Japanese medaka): 101166689
Entry
101166689         CDS       T02443                                 
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1
  KO
K20100  YTH domain-containing protein 1
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ola03041]
    101166689 (ythdc1)
Spliceosome [BR:ola03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    101166689 (ythdc1)
SSDB
Motif
Pfam: YTH
Other DBs
NCBI-GeneID: 101166689
NCBI-ProteinID: XP_023816602
UniProt: A0A3B3IJZ9
LinkDB
Position
12:complement(81858..89727)
AA seq 665 aa
MAAERREDKDGELNVLEDLLTEAPDQDDELYNPDTERDLSDKKGTKRKSERSDSQDLKRL
RLPSSHASSTKRGLGSSASSSKKSSSPRGRPSAAYRHDYYEERKRRRDSRDAVRSRRGED
GRRRDLQRGPDLNQKLVRDERPASSDLRDDSQSEDEVVGEYGSEQASGSSSPTASHAEEE
EEEEQEEEDEEEEEEEEEEGMEEEEEEGVKEEEEEEEEEYDERRGGDSNDYDTRSEAGGS
RSASSVSFSEEGESVHSGSASEASGSDKKQEKLSSSVRAVRKGVENPTSKLRYILRDARF
FLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFARLAS
ESQHGGSPIHWVLPAGINAKMLGGVFKIDWLCRRELPFIKTAHLSNPWNEHKPIKIGRDG
QEIQPDVGAQLCGLFPLDESVDVHQVSRRIRHKRRTPTEPRPRGRPPLREPGRRRLEEYD
IHSRKRPRADGLPDFVQRAGFLQDPRNQPVDRRFSGVRRDVFLNGSYDYMRDYHHNVGPP
APWQTLAAYPGVEQQPPHHPPYYHHSHPPPAPHQTYHHHHPPLPPHDAPPSRFRDKQRVP
QHRTFTSSPHDYDMRVDDFLRRTQAVVSSRRERQRERERGGPRRDRERGRDRDRERDKER
GRYRR
NT seq 1998 nt   +upstreamnt  +downstreamnt
atggcggccgaacggcgcgaggacaaagacggcgagctgaacgtgctggaggacctgctg
acggaagccccggatcaggacgatgagctgtacaacccggacacggaacgggacctgagt
gacaagaaaggaacaaagaggaagagcgaacggtctgatagccaagatctgaagaggctc
cgccttccatcaagccacgcctcttccactaagagaggcttgggctcatcagcgtcatcc
tctaagaagtcgtccagccctcgcggccgcccctctgctgcttaccgtcacgactactat
gaagagcgaaagcggcggcgcgactcccgagacgccgttcggagccgcagaggtgaggat
ggacggcgccgagacctccagaggggcccggacctaaaccagaaactggttcgggacgag
cggccagccagctccgacctccgtgacgacagccaatcagaggatgaggtggtgggagag
tacggctcagagcaggcatctggaagctcctcccccactgcctcccatgcagaggaggaa
gaagaggaggagcaggaggaagaggatgaggaggaggaggaggaggaggaagaagaagga
atggaggaagaagaggaggaaggcgtgaaggaggaggaagaagaggaggaggaagagtat
gacgagcgccgtggtggagacagtaacgactacgacactcgcagcgaagctggcgggtcg
cgctccgcctcctcggtcagcttctctgaagagggcgagtctgtgcactcgggctctgca
tcagaggcttcaggttccgataagaagcaggagaagctgtcgtcgtctgtgcgagccgtt
cgtaaaggcgtggaaaatcccaccagcaagctgcgctacatcctgcgtgacgctcgcttt
ttcctcatcaagagcaataaccacgagaacgtgtccctggctaaagccaaaggagtctgg
tccacgttaccggtcaacgagaagaagctgaacgcggcgtttcgctcggcgcggagcgtc
atcctcatcttctctgtgagggaaagcggaaaatttcaaggttttgctcggctggcctca
gagtctcaacatggcggctctcccatccattgggtgcttcctgccggcattaatgctaag
atgctgggaggagtctttaaaatcgactggctctgcaggagggagctgcccttcatcaag
acggcccacctctccaacccatggaacgagcacaagccgatcaaaattggacgagatgga
caggagatccagccggacgtcggcgctcaactctgtggactgtttccattggacgagagt
gtggatgttcatcaggtgtctcgccgcattcggcacaaacgcaggacaccgacggagccg
cggccccgaggccgaccgccactgagagaaccgggaaggcgtcggctggaagagtacgac
atccacagcaggaagcgaccgcgagccgacggcctaccggactttgtacaacgagcagga
ttcctccaggacccacggaaccagccggtggacaggaggttctcgggcgtcaggagggac
gtcttcctcaacgggtcctacgactacatgagagattatcaccacaacgtcgggcccccg
gctccatggcaaactctggcggcctatcctggggtggagcagcagcctccccaccatcct
ccatattaccaccacagtcaccccccacccgcccctcatcagacgtaccatcatcatcac
ccccccctgcccccccatgatgctccaccctctcgcttcagagacaagcagcgtgtcccg
cagcatcgcaccttcacctccagcccgcatgactacgacatgcgtgtggatgacttcctg
cggcggactcaagcagtggtgagcagccggcgtgagcggcagcgggaacgtgaacgtgga
ggaccacgccgtgaccgggagcgcggcagggatagggacagagaaagggacaaagaaagg
gggcggtaccgtaggtga

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