Oryzias latipes (Japanese medaka): 101166689
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Entry
101166689 CDS
T02443
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1
KO
K20100
YTH domain-containing protein 1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101166689 (ythdc1)
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101166689 (ythdc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
101166689
NCBI-ProteinID:
XP_023816602
UniProt:
A0A3B3IJZ9
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Position
12:complement(81858..89727)
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AA seq
665 aa
AA seq
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MAAERREDKDGELNVLEDLLTEAPDQDDELYNPDTERDLSDKKGTKRKSERSDSQDLKRL
RLPSSHASSTKRGLGSSASSSKKSSSPRGRPSAAYRHDYYEERKRRRDSRDAVRSRRGED
GRRRDLQRGPDLNQKLVRDERPASSDLRDDSQSEDEVVGEYGSEQASGSSSPTASHAEEE
EEEEQEEEDEEEEEEEEEEGMEEEEEEGVKEEEEEEEEEYDERRGGDSNDYDTRSEAGGS
RSASSVSFSEEGESVHSGSASEASGSDKKQEKLSSSVRAVRKGVENPTSKLRYILRDARF
FLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFARLAS
ESQHGGSPIHWVLPAGINAKMLGGVFKIDWLCRRELPFIKTAHLSNPWNEHKPIKIGRDG
QEIQPDVGAQLCGLFPLDESVDVHQVSRRIRHKRRTPTEPRPRGRPPLREPGRRRLEEYD
IHSRKRPRADGLPDFVQRAGFLQDPRNQPVDRRFSGVRRDVFLNGSYDYMRDYHHNVGPP
APWQTLAAYPGVEQQPPHHPPYYHHSHPPPAPHQTYHHHHPPLPPHDAPPSRFRDKQRVP
QHRTFTSSPHDYDMRVDDFLRRTQAVVSSRRERQRERERGGPRRDRERGRDRDRERDKER
GRYRR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaacggcgcgaggacaaagacggcgagctgaacgtgctggaggacctgctg
acggaagccccggatcaggacgatgagctgtacaacccggacacggaacgggacctgagt
gacaagaaaggaacaaagaggaagagcgaacggtctgatagccaagatctgaagaggctc
cgccttccatcaagccacgcctcttccactaagagaggcttgggctcatcagcgtcatcc
tctaagaagtcgtccagccctcgcggccgcccctctgctgcttaccgtcacgactactat
gaagagcgaaagcggcggcgcgactcccgagacgccgttcggagccgcagaggtgaggat
ggacggcgccgagacctccagaggggcccggacctaaaccagaaactggttcgggacgag
cggccagccagctccgacctccgtgacgacagccaatcagaggatgaggtggtgggagag
tacggctcagagcaggcatctggaagctcctcccccactgcctcccatgcagaggaggaa
gaagaggaggagcaggaggaagaggatgaggaggaggaggaggaggaggaagaagaagga
atggaggaagaagaggaggaaggcgtgaaggaggaggaagaagaggaggaggaagagtat
gacgagcgccgtggtggagacagtaacgactacgacactcgcagcgaagctggcgggtcg
cgctccgcctcctcggtcagcttctctgaagagggcgagtctgtgcactcgggctctgca
tcagaggcttcaggttccgataagaagcaggagaagctgtcgtcgtctgtgcgagccgtt
cgtaaaggcgtggaaaatcccaccagcaagctgcgctacatcctgcgtgacgctcgcttt
ttcctcatcaagagcaataaccacgagaacgtgtccctggctaaagccaaaggagtctgg
tccacgttaccggtcaacgagaagaagctgaacgcggcgtttcgctcggcgcggagcgtc
atcctcatcttctctgtgagggaaagcggaaaatttcaaggttttgctcggctggcctca
gagtctcaacatggcggctctcccatccattgggtgcttcctgccggcattaatgctaag
atgctgggaggagtctttaaaatcgactggctctgcaggagggagctgcccttcatcaag
acggcccacctctccaacccatggaacgagcacaagccgatcaaaattggacgagatgga
caggagatccagccggacgtcggcgctcaactctgtggactgtttccattggacgagagt
gtggatgttcatcaggtgtctcgccgcattcggcacaaacgcaggacaccgacggagccg
cggccccgaggccgaccgccactgagagaaccgggaaggcgtcggctggaagagtacgac
atccacagcaggaagcgaccgcgagccgacggcctaccggactttgtacaacgagcagga
ttcctccaggacccacggaaccagccggtggacaggaggttctcgggcgtcaggagggac
gtcttcctcaacgggtcctacgactacatgagagattatcaccacaacgtcgggcccccg
gctccatggcaaactctggcggcctatcctggggtggagcagcagcctccccaccatcct
ccatattaccaccacagtcaccccccacccgcccctcatcagacgtaccatcatcatcac
ccccccctgcccccccatgatgctccaccctctcgcttcagagacaagcagcgtgtcccg
cagcatcgcaccttcacctccagcccgcatgactacgacatgcgtgtggatgacttcctg
cggcggactcaagcagtggtgagcagccggcgtgagcggcagcgggaacgtgaacgtgga
ggaccacgccgtgaccgggagcgcggcagggatagggacagagaaagggacaaagaaagg
gggcggtaccgtaggtga
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