Oryzias latipes (Japanese medaka): 101166788
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Entry
101166788 CDS
T02443
Symbol
traip
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101166788 (traip)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101166788 (traip)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101166788 (traip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-ANAPC11
zf-RING_11
zf-RING_5
Aminoglyc_resit
zf-C3HC4_4
Sec3_CC
zf-RING-like
zf-RING_Vps41
RING_XB3-XBAT31
AAA_13
Zn_ribbon_8
GAS
Fez1
CENP-F_leu_zip
COG3_N
TSNAXIP1_N
zf_RING_Vps8
zf-RING_16
HhH-GPD
DUF1664
Crescentin
RINGv
zf-Nse
MAD
DUF5955
Motif
Other DBs
NCBI-GeneID:
101166788
NCBI-ProteinID:
XP_004069146
UniProt:
H2MGY9
LinkDB
All DBs
Position
5:complement(26511675..26517963)
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AA seq
449 aa
AA seq
DB search
MPIRASCTICSDLFDHSRDVAAIHCGHTFHYECVLKWFQTAPTKTCPQCRKQVSTRHIIC
KLFFNIGGEEESTLDPESLENELGRVRALLSSKEQDWRDKQKAMDILKDTVDRQKRDLDN
MRKEIRDKDMLCSALKKQMTYMEMQQNEVQAAKEEARRLRTKLKTFESLDVLLQGQRAEV
ESMITDMGVSQSAVEQLSIYCISLKKEYDNLKGSLKSSNDMCEKLKREVLSSNNKLQKTS
LELHQTKEDVTSLQADLANADKEISSLKKKVDFLQKTLSTPTRTNETLSRLVFESPAPVN
LKEPRFHQPPDGDDVDLNITYDISTPEHMVKRSKQVTAKRMSLDPPLTSFARPYNKSAAK
SKTCDEDPAMDPFLRNSLLFRKKTFGSMLDPHQKPGAVRTGYDGLGGRTKFFQPSVLSEI
RPLNKAKRKKVSRPTPKMTPCLTLDSFLE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcctatacgagcatcttgcacaatttgctcggatctcttcgatcactccagagatgtc
gccgccattcactgcggacacactttccattatgaatgtgttcttaagtggtttcagacg
gcgcccacgaaaacctgtccacagtgcaggaaacaggtcagcaccagacacatcatctgc
aagctgttctttaacattggtggagaggaagagagcacattagacccagagagccttgag
aatgaacttggtcgagtgagagcccttctaagctccaaagagcaagactggcgggacaaa
caaaaagcgatggacatcttaaaagacaccgtggacaggcagaaacgagacctggacaac
atgcggaaagagatccgggataaggatatgctgtgttcagctctcaaaaaacagatgacg
tatatggaaatgcagcaaaatgaagttcaggctgcaaaggaggaggcccggaggctgaga
accaagttaaaaacctttgagagcttggatgtgttgttgcagggccagagggcagaggtg
gagtccatgatcaccgacatgggcgtcagccagtcagcagtggagcagctctccatttat
tgcatctctttgaaaaaggagtatgataaccttaaagggagcctaaagtcttccaatgac
atgtgtgagaaactgaagagagaagtgctctcctctaacaacaagctgcagaaaacttca
ctggagttacatcagaccaaggaagatgtaacatctttgcaggcagatctggcaaatgcc
gacaaagagatttctagtctgaagaaaaaagtggactttctgcagaagaccctgagcacc
cccaccaggacaaatgaaaccctcagcaggctggtctttgagagtccagctccagtgaat
ctaaaggagcctcgcttccaccagccgcccgatggagatgacgtggatctcaacattacc
tatgacatcagcaccccagagcacatggtcaagaggtcaaagcaggttacagcaaagagg
atgagtcttgacccacctttaacttcttttgccagaccctacaataaatctgcagcaaag
agcaagacttgtgatgaagatccagccatggatccgttcctaaggaactccctgcttttc
cgaaagaagacctttggtagcatgttggaccctcatcagaaaccaggagcagtcagaacg
ggttatgatggactcggtggcagaactaaattcttccagccttctgtgctatcggagatt
cgaccactaaataaggccaagaggaaaaaggtgagccgccccactccaaagatgaccccc
tgcctgactctggacagcttcctggagtaa
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