Oryzias latipes (Japanese medaka): 101166900
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Entry
101166900 CDS
T02443
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X3
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04010
MAPK signaling pathway
ola04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101166900 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
101166900 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101166900 (nfkb2)
Transcription factors [BR:
ola03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
101166900 (nfkb2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
101166900
NCBI-ProteinID:
XP_004077294
UniProt:
H2LCN6
LinkDB
All DBs
Position
15:complement(12630279..12642545)
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AA seq
886 aa
AA seq
DB search
MASALRMSEASFINYDNELQLNLMPYDYIPPVDIKTEPYIPETVHGPYIQIIEEPKQRGF
RFRYECEGPSHGGLPGASSEKNRRTYPTVKINNYVGQARVEVQLVTHTDPPRVHAHSLVG
RNCTESGTCVLDVGPNDLTASFSNLGILHVTKKGVVDVLTRRLREERRRQTGGHCHLTDA
EEASIQKEVKELSKSMDLNIVRLKFTAYLQDSNGGFTRALKPVVSNPIYDSKSPNASNLK
ISRMDKTCGSVLGGDEIFLLCDKVQKDDIEIRFYEEDDEGGWEAFGDFSPTDVHKQYAIV
FKTPPYHSTEIQRSVTVFLQLRRKKAGDSSDPKQFTYIPQVQDKEEVLRKKQKPLPHYES
WRGGGRGGGAGGFGGGASGGAGGFQFHQQMNGGGGGTFYSEGFTGFTGAAQMSGSAPQQS
DRPAGSPLQQQLLQIAATLNNRVSQSARQTAAALLQYCRTGDTRALLAIQTHLCSVQDTN
GDTPLHLSIIHLQTGVTQQLIHTLLSSRQQRILNTTNHLQQTPLHLAVITRQPKVVEALL
RAGADPTLPDKDGRSPLHLAALAGDSSLLRLLLSHMGERHSHLVNTPDYHGLQPLHLAVR
RDGERCLRLLIEGGAKINAPEQKSGNTALHLAVRENLFKVACTLITELKADTNACTFGGN
TPLHLAASLGSPTLCSMLIAAGADKNIQNDEPLSCSSSSDEEVDESELTREELAERAASQ
PINTRKRRAGHTPLDLATCHKVRNLLQSGQSPTASRHSNKKIKANSGEGAEGSGLNEDTL
AQLVEVLSVSDIPWIKLAEKLGMMTLTHLYQDSPTPCHHLLQHYKLGGGAVDDLVKALQS
LGLTEGIRLLRNAELQEDKHSTDATVDSGFSSQPMEEEEQQPAANH
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgctctgaggatgagcgaagcttccttcatcaactacgacaacgagctgcag
ctcaacctgatgccttatgactacattcccccagtggacataaagactgaaccctacata
cctgagacagttcacggtccgtacatccagatcatcgaagagcccaaacagaggggcttt
cgtttccgctatgagtgtgagggtccgtcacacggcgggctgccaggggcctctagcgag
aaaaacagaaggacctacccgacagtgaagattaacaactatgtgggtcaggcccgggtg
gaggtgcagctcgtcacccacaccgaccccccgcgagtccacgcccacagcctggtgggg
cgcaactgcaccgagagcggcacctgtgtgctggacgtcggccccaacgacctcactgcc
tcgttcagtaatttggggatcctccatgtgaccaagaagggcgtggtcgatgttctgacc
cgaagactgagggaggaaaggaggagacaaaccggaggacactgtcacctgacagatgct
gaagaggcctccatccagaaggaggtgaaggagctgagtaagagcatggacctgaacatt
gtgcggctcaagttcactgcctacctgcaggacagcaacggaggcttcacacgcgcgctc
aaacctgtggtgtccaaccccatttatgatagcaagtcgcccaatgcctccaacctgaag
atctccaggatggataagacttgtggctctgtactcggaggagatgagatcttcctgctg
tgtgataaagtgcagaaagatgacattgagatccgcttctatgaggaggacgatgagggc
ggctgggaggcgttcggggacttctcccccaccgacgttcacaaacagtatgccattgtg
ttcaagacgccgccgtatcacagcactgagatccagcggtctgtcaccgtcttcctgcag
ctccggaggaagaaagccggggacagcagtgaccccaaacagtttacctacataccacaa
gtccaagacaaagaagaggttctgaggaagaagcagaagccactgcctcactatgagtcc
tggagaggagggggaagagggggaggcgctgggggatttgggggaggagccagtggagga
gctggaggatttcaattccaccagcagatgaacggaggaggaggcggaactttttactca
gaagggttcacaggctttactggagcagctcagatgtcaggctccgccccccagcagagc
gacagaccagcaggctcaccactgcagcaacagctgctacaaattgctgccacgctcaac
aaccgtgtgtctcaaagcgcccggcagaccgccgctgccctgctgcagtactgccgcact
ggggacactcgcgctcttctcgccatccagacacacctgtgcagcgtccaggacaccaat
ggagacacgccgctgcacctgtccatcatccacctgcagacaggtgtgacacagcagctc
atccacactctgctcagcagccggcagcagcggatcctgaacaccaccaatcacctccag
cagactccccttcacctggcggtgatcacccgtcaaccaaaggtggtggaggcgctgctg
agggcgggggctgaccccacccttccagacaaagacggtcggagccctctccacctggca
gcactggcaggcgacagctcattgctccgcctcctgctgtctcacatgggagaacgccac
agccacctggtgaacacgcctgactaccatggtcttcagccgctgcacctcgctgtgagg
agggacggcgagcgctgcctgcgtctgctgattgagggcggagctaaaattaatgcccca
gagcagaagagtgggaacacggcactccacctggctgtgagagaaaacctgttcaaggtt
gcctgcacgcttatcacagagctaaaggcggacaccaatgcctgcacgtttggaggaaac
acgccgctgcacctggccgccagcctgggctcccccacgctctgctctatgctgatcgca
gcaggcgcagacaagaacatccagaacgacgagccactctcctgcagctcctcgtcagat
gaagaagtggacgagagcgaactaaccagggaggagctcgcggaacgagccgcttctcag
ccaatcaacactcgcaagagacgggcaggacacacccctctggacctcgccacttgccac
aaggtgaggaacctgctgcaaagcggccagagtcccacagcaagtcgccacagcaacaag
aagatcaaagccaacagcggtgaaggcgccgaggggtcggggctgaacgaggacacgctg
gcccagctggtggaggtgctgagcgtcagcgacattccctggataaagctggcggagaag
ctgggcatgatgaccctgactcacctgtaccaggatagccccaccccctgccaccacctg
ctgcagcactacaagctgggtgggggcgccgtggacgatttggtaaaagctcttcagtct
ctcggtctgacagaaggaatccgcctgctgaggaacgcagagctgcaggaggataagcac
agcacagacgccactgttgacagcggcttcagcagccagccaatggaggaggaggagcaa
cagcctgcagccaatcactga
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